RNA–Protein interactions for RNA: ENST00000277549.9

CACNA1B-201, Transcript of calcium voltage-gated channel subunit alpha1 B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1B, Length 7,158 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1B-201ENST00000277549 GSTTP1A0A1W2PQM5 241 aa23.76■■□□□ 1.39
CACNA1B-201ENST00000277549 KIF20AO95235 890 aa23.76■■□□□ 1.39
CACNA1B-201ENST00000277549 CCDC192P0DO97 292 aa23.76■■□□□ 1.39
CACNA1B-201ENST00000277549 ANKRD1Q15327 319 aa23.76■■□□□ 1.39
CACNA1B-201ENST00000277549 DPH6Q7L8W6 267 aa23.76■■□□□ 1.39
CACNA1B-201ENST00000277549 ARL1P40616 181 aaPredicted RBP23.76■■□□□ 1.39
CACNA1B-201ENST00000277549 ERICH4A6NGS2 130 aa23.75■■□□□ 1.39
CACNA1B-201ENST00000277549 EPB41L2O43491 1005 aaKnown RBP23.75■■□□□ 1.39
CACNA1B-201ENST00000277549 ACSBG1Q96GR2 724 aa23.75■■□□□ 1.39
CACNA1B-201ENST00000277549 MAP2K1Q02750 393 aaPredicted RBP23.74■■□□□ 1.39
CACNA1B-201ENST00000277549 PPP2R1AP30153 589 aa23.74■■□□□ 1.39
CACNA1B-201ENST00000277549 CACNA2D4Q7Z3S7 1137 aa23.74■■□□□ 1.39
CACNA1B-201ENST00000277549 CCDC91Q7Z6B0 441 aa23.74■■□□□ 1.39
CACNA1B-201ENST00000277549 BICD1Q96G01 975 aa23.74■■□□□ 1.39
CACNA1B-201ENST00000277549 LARP1Q6PKG0 1096 aaKnown RBP23.74■■□□□ 1.39
CACNA1B-201ENST00000277549 PLS1Q14651 629 aa23.74■■□□□ 1.39
CACNA1B-201ENST00000277549 RTEL1-TNFRSF6BF6WH68 1400 aa23.74■■□□□ 1.39
CACNA1B-201ENST00000277549 FERMT3Q86UX7 667 aa23.74■■□□□ 1.39
CACNA1B-201ENST00000277549 CPLX3Q8WVH0 158 aa23.74■■□□□ 1.39
CACNA1B-201ENST00000277549 ZNF397Q8NF99 534 aaPredicted RBP23.74■■□□□ 1.39
CACNA1B-201ENST00000277549 TSG101Q99816 390 aa23.73■■□□□ 1.39
CACNA1B-201ENST00000277549 RAPGEF3O95398 923 aa23.73■■□□□ 1.39
CACNA1B-201ENST00000277549 AEBP1Q8IUX7 1158 aa23.73■■□□□ 1.39
CACNA1B-201ENST00000277549 THUMPD2Q9BTF0 503 aaKnown RBP23.73■■□□□ 1.39
CACNA1B-201ENST00000277549 PABPN1LA6NDY0 278 aaKnown RBP23.72■■□□□ 1.39
CACNA1B-201ENST00000277549 PNISRQ8TF01 805 aaKnown RBP23.72■■□□□ 1.39
CACNA1B-201ENST00000277549 MROH2BQ7Z745 1585 aa23.72■■□□□ 1.39
CACNA1B-201ENST00000277549 RABEP1Q15276 862 aa23.72■■□□□ 1.39
CACNA1B-201ENST00000277549 UPF3BQ9BZI7 483 aaKnown RBP23.72■■□□□ 1.39
CACNA1B-201ENST00000277549 CFAP45Q9UL16 551 aa23.72■■□□□ 1.39
CACNA1B-201ENST00000277549 GOLGA6L7A0A1B0GV03 622 aa23.72■■□□□ 1.39
CACNA1B-201ENST00000277549 CBFA2T2O43439 604 aa23.72■■□□□ 1.39
CACNA1B-201ENST00000277549 NAPBQ9H115 298 aa23.72■■□□□ 1.39
CACNA1B-201ENST00000277549 CFAP100Q494V2 611 aa23.72■■□□□ 1.39
CACNA1B-201ENST00000277549 EXOC6BQ9Y2D4 811 aa23.72■■□□□ 1.39
CACNA1B-201ENST00000277549 KRT85P78386 507 aa23.72■■□□□ 1.39
CACNA1B-201ENST00000277549 ZMYND15Q9H091 742 aa23.71■■□□□ 1.39
CACNA1B-201ENST00000277549 BIN2Q9UBW5 565 aaPredicted RBP23.71■■□□□ 1.39
CACNA1B-201ENST00000277549 CCDC83Q8IWF9 413 aa23.71■■□□□ 1.39
CACNA1B-201ENST00000277549 CKAP2LQ8IYA6 745 aa23.71■■□□□ 1.39
CACNA1B-201ENST00000277549 CCDC8Q9H0W5 538 aaPredicted RBP23.71■■□□□ 1.39
CACNA1B-201ENST00000277549 IFIT1P09914 478 aaKnown RBP23.7■■□□□ 1.39
CACNA1B-201ENST00000277549 LMAN1P49257 510 aa23.7■■□□□ 1.39
CACNA1B-201ENST00000277549 NLRP5P59047 1200 aa23.7■■□□□ 1.38
CACNA1B-201ENST00000277549 SMC1AQ14683 1233 aaKnown RBP23.7■■□□□ 1.38
CACNA1B-201ENST00000277549 CTNNA3Q9UI47 895 aa23.7■■□□□ 1.38
CACNA1B-201ENST00000277549 RGS22Q8NE09 1264 aa23.7■■□□□ 1.38
CACNA1B-201ENST00000277549 ZBTB3Q9H5J0 574 aa23.7■■□□□ 1.38
CACNA1B-201ENST00000277549 TXLNBQ8N3L3 684 aa23.7■■□□□ 1.38
CACNA1B-201ENST00000277549 GNAT3A8MTJ3 354 aa23.69■■□□□ 1.38
CACNA1B-201ENST00000277549 CEP63Q96MT8 703 aa23.69■■□□□ 1.38
CACNA1B-201ENST00000277549 NBPF1Q3BBV0 1214 aa23.69■■□□□ 1.38
CACNA1B-201ENST00000277549 TCERG1LQ5VWI1 586 aa23.69■■□□□ 1.38
CACNA1B-201ENST00000277549 PRPF40BQ6NWY9 871 aaKnown RBP23.69■■□□□ 1.38
CACNA1B-201ENST00000277549 PRPF4BQ13523 1007 aaKnown RBP23.68■■□□□ 1.38
CACNA1B-201ENST00000277549 SYCP3Q8IZU3 236 aa23.68■■□□□ 1.38
CACNA1B-201ENST00000277549 WIZO95785 1651 aa23.68■■□□□ 1.38
CACNA1B-201ENST00000277549 ZNF287Q9HBT7 754 aa23.68■■□□□ 1.38
CACNA1B-201ENST00000277549 RFC4P35249 363 aa23.68■■□□□ 1.38
CACNA1B-201ENST00000277549 CETN2P41208 172 aa23.68■■□□□ 1.38
CACNA1B-201ENST00000277549 ISM2Q6H9L7 571 aa23.68■■□□□ 1.38
CACNA1B-201ENST00000277549 CADPSQ9ULU8 1353 aa23.68■■□□□ 1.38
CACNA1B-201ENST00000277549 WASF1Q92558 559 aa23.68■■□□□ 1.38
CACNA1B-201ENST00000277549 SPA17Q15506 151 aa23.67■■□□□ 1.38
CACNA1B-201ENST00000277549 CCT2P78371 535 aaKnown RBP23.67■■□□□ 1.38
CACNA1B-201ENST00000277549 FANCD2Q9BXW9 1451 aa23.67■■□□□ 1.38
CACNA1B-201ENST00000277549 PRC1O43663 620 aa23.67■■□□□ 1.38
CACNA1B-201ENST00000277549 TDRD12Q587J7 1177 aaKnown RBP23.67■■□□□ 1.38
CACNA1B-201ENST00000277549 GCC1Q96CN9 775 aa23.67■■□□□ 1.38
CACNA1B-201ENST00000277549 CEP131Q9UPN4 1083 aa23.67■■□□□ 1.38
CACNA1B-201ENST00000277549 PICALMQ13492 652 aa23.67■■□□□ 1.38
CACNA1B-201ENST00000277549 OTUD6BQ8N6M0 293 aa23.66■■□□□ 1.38
CACNA1B-201ENST00000277549 SLC5A1P13866 664 aa23.66■■□□□ 1.38
CACNA1B-201ENST00000277549 PANK2Q9BZ23 570 aa23.66■■□□□ 1.38
CACNA1B-201ENST00000277549 WAPLQ7Z5K2 1190 aa23.66■■□□□ 1.38
CACNA1B-201ENST00000277549 ARHGAP29Q52LW3 1261 aa23.66■■□□□ 1.38
CACNA1B-201ENST00000277549 TMCO5BA8MYB1 307 aa23.65■■□□□ 1.38
CACNA1B-201ENST00000277549 FAM212AQ96EL1 285 aa23.65■■□□□ 1.38
CACNA1B-201ENST00000277549 STAMBPO95630 424 aa23.65■■□□□ 1.38
CACNA1B-201ENST00000277549 MRE11P49959 708 aa23.65■■□□□ 1.38
CACNA1B-201ENST00000277549 AKNAD1Q5T1N1 836 aa23.65■■□□□ 1.38
CACNA1B-201ENST00000277549 NUP62CLQ9H1M0 184 aa23.65■■□□□ 1.38
CACNA1B-201ENST00000277549 IFIT5Q13325 482 aaKnown RBP23.65■■□□□ 1.38
CACNA1B-201ENST00000277549 FKBP15Q5T1M5 1219 aa23.64■■□□□ 1.38
CACNA1B-201ENST00000277549 CCDC148Q8NFR7 591 aa23.64■■□□□ 1.38
CACNA1B-201ENST00000277549 SLC12A7Q9Y666 1083 aa23.64■■□□□ 1.38
CACNA1B-201ENST00000277549 MBD3O95983 291 aa23.64■■□□□ 1.37
CACNA1B-201ENST00000277549 IFFO1Q0D2I5 559 aa23.64■■□□□ 1.37
CACNA1B-201ENST00000277549 INCENPQ9NQS7 918 aa23.64■■□□□ 1.37
CACNA1B-201ENST00000277549 PRKCSHP14314 528 aaPredicted RBP23.63■■□□□ 1.37
CACNA1B-201ENST00000277549 EHMT1Q9H9B1 1298 aa23.63■■□□□ 1.37
CACNA1B-201ENST00000277549 HOOK3Q86VS8 718 aa23.63■■□□□ 1.37
CACNA1B-201ENST00000277549 CTCFLQ8NI51 663 aaPredicted RBP23.63■■□□□ 1.37
CACNA1B-201ENST00000277549 TICAM2Q86XR7 235 aa23.63■■□□□ 1.37
CACNA1B-201ENST00000277549 SNRKQ9NRH2 765 aa23.63■■□□□ 1.37
CACNA1B-201ENST00000277549 SSX2IPQ9Y2D8 614 aa23.63■■□□□ 1.37
CACNA1B-201ENST00000277549 WDR33Q9C0J8 1336 aaKnown RBP23.62■■□□□ 1.37
CACNA1B-201ENST00000277549 TMEM266Q2M3C6 531 aa23.62■■□□□ 1.37
CACNA1B-201ENST00000277549 IQCEQ6IPM2 695 aa23.62■■□□□ 1.37
CACNA1B-201ENST00000277549 IQSEC3Q9UPP2 1182 aaPredicted RBP23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms