RNA–Protein interactions for RNA: ENST00000274901.8

HMGCLL1-201, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-201ENST00000274901 FUCA2Q9BTY2 467 aa11.09□□□□□ -0.63
HMGCLL1-201ENST00000274901 CNPY2Q9Y2B0 182 aa11.09□□□□□ -0.63
HMGCLL1-201ENST00000274901 CAPN2P17655 700 aa11.09□□□□□ -0.63
HMGCLL1-201ENST00000274901 CCDC183Q5T5S1 534 aa11.09□□□□□ -0.63
HMGCLL1-201ENST00000274901 TMEM131LA2VDJ0 1609 aa11.08□□□□□ -0.64
HMGCLL1-201ENST00000274901 PHF14O94880 888 aa11.08□□□□□ -0.64
HMGCLL1-201ENST00000274901 PTGS1P23219 599 aa11.08□□□□□ -0.64
HMGCLL1-201ENST00000274901 TERF2Q15554 542 aa11.08□□□□□ -0.64
HMGCLL1-201ENST00000274901 GIMAP6Q6P9H5 292 aa11.08□□□□□ -0.64
HMGCLL1-201ENST00000274901 ST7Q9NRC1 585 aa11.08□□□□□ -0.64
HMGCLL1-201ENST00000274901 ADGRB1O14514 1584 aa11.08□□□□□ -0.64
HMGCLL1-201ENST00000274901 RPAP1Q9BWH6 1393 aaPredicted RBP11.08□□□□□ -0.64
HMGCLL1-201ENST00000274901 CHAF1AQ13111 956 aaPredicted RBP11.08□□□□□ -0.64
HMGCLL1-201ENST00000274901 SRCIN1Q9C0H9 1055 aa11.08□□□□□ -0.64
HMGCLL1-201ENST00000274901 ATP10DQ9P241 1426 aa11.07□□□□□ -0.64
HMGCLL1-201ENST00000274901 ERC2O15083 957 aa11.07□□□□□ -0.64
HMGCLL1-201ENST00000274901 DTNBO60941 627 aa11.07□□□□□ -0.64
HMGCLL1-201ENST00000274901 LRMPQ12912 555 aa11.07□□□□□ -0.64
HMGCLL1-201ENST00000274901 KIF18AQ8NI77 898 aa11.07□□□□□ -0.64
HMGCLL1-201ENST00000274901 GGNBP2Q9H3C7 697 aa11.07□□□□□ -0.64
HMGCLL1-201ENST00000274901 MORC2Q9Y6X9 1032 aaPredicted RBP11.07□□□□□ -0.64
HMGCLL1-201ENST00000274901 MX1P20591 662 aa11.07□□□□□ -0.64
HMGCLL1-201ENST00000274901 CEBPAP49715 358 aaPredicted RBP11.07□□□□□ -0.64
HMGCLL1-201ENST00000274901 KRT24Q2M2I5 525 aa11.07□□□□□ -0.64
HMGCLL1-201ENST00000274901 TSHZ3Q63HK5 1081 aa11.07□□□□□ -0.64
HMGCLL1-201ENST00000274901 ARHGAP45Q92619 1136 aa11.07□□□□□ -0.64
HMGCLL1-201ENST00000274901 C16orf45Q96MC5 204 aaPredicted RBP11.07□□□□□ -0.64
HMGCLL1-201ENST00000274901 ERICH4A6NGS2 130 aa11.06□□□□□ -0.64
HMGCLL1-201ENST00000274901 SETBP1Q9Y6X0 1596 aa11.06□□□□□ -0.64
HMGCLL1-201ENST00000274901 REC8O95072 547 aa11.06□□□□□ -0.64
HMGCLL1-201ENST00000274901 UPF3BQ9BZI7 483 aaKnown RBP11.06□□□□□ -0.64
HMGCLL1-201ENST00000274901 CDK11BP21127 795 aaKnown RBP11.05□□□□□ -0.64
HMGCLL1-201ENST00000274901 TMEM87AQ8NBN3 555 aa11.05□□□□□ -0.64
HMGCLL1-201ENST00000274901 RTL1A6NKG5 1358 aa11.05□□□□□ -0.64
HMGCLL1-201ENST00000274901 LRRC7Q96NW7 1537 aa11.05□□□□□ -0.64
HMGCLL1-201ENST00000274901 NRBP1Q9UHY1 535 aa11.04□□□□□ -0.64
HMGCLL1-201ENST00000274901 KMT5BQ4FZB7 885 aa11.04□□□□□ -0.64
HMGCLL1-201ENST00000274901 C8orf58Q8NAV2 365 aa11.04□□□□□ -0.64
HMGCLL1-201ENST00000274901 PHACTR3Q96KR7 559 aa11.04□□□□□ -0.64
HMGCLL1-201ENST00000274901 TRERF1Q96PN7 1200 aa11.04□□□□□ -0.64
HMGCLL1-201ENST00000274901 TULP4Q9NRJ4 1543 aa11.04□□□□□ -0.64
HMGCLL1-201ENST00000274901 A2ML1A8K2U0 1454 aa11.03□□□□□ -0.64
HMGCLL1-201ENST00000274901 HOMEZQ8IX15 550 aa11.03□□□□□ -0.64
HMGCLL1-201ENST00000274901 INTS4Q96HW7 963 aaKnown RBP11.03□□□□□ -0.64
HMGCLL1-201ENST00000274901 CHMP4AQ9BY43 222 aa11.03□□□□□ -0.64
HMGCLL1-201ENST00000274901 CABP2Q9NPB3 220 aa11.03□□□□□ -0.64
HMGCLL1-201ENST00000274901 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.03□□□□□ -0.64
HMGCLL1-201ENST00000274901 V9GYY5 206 aaPredicted RBP11.03□□□□□ -0.64
HMGCLL1-201ENST00000274901 SPATA31D1Q6ZQQ2 1576 aa11.03□□□□□ -0.64
HMGCLL1-201ENST00000274901 NSD2O96028 1365 aa11.03□□□□□ -0.64
HMGCLL1-201ENST00000274901 MINK1Q8N4C8 1332 aaPredicted RBP11.03□□□□□ -0.64
HMGCLL1-201ENST00000274901 SMTNL1A8MU46 457 aa11.03□□□□□ -0.64
HMGCLL1-201ENST00000274901 TULP2O00295 520 aa11.03□□□□□ -0.64
HMGCLL1-201ENST00000274901 SYCP1Q15431 976 aa11.03□□□□□ -0.64
HMGCLL1-201ENST00000274901 CEP85Q6P2H3 762 aa11.03□□□□□ -0.64
HMGCLL1-201ENST00000274901 CASC1Q6TDU7 716 aa11.03□□□□□ -0.64
HMGCLL1-201ENST00000274901 ANKRD44Q8N8A2 993 aa11.03□□□□□ -0.64
HMGCLL1-201ENST00000274901 MBIPQ9NS73 344 aa11.03□□□□□ -0.64
HMGCLL1-201ENST00000274901 ZFYVE9O95405 1425 aa11.03□□□□□ -0.64
HMGCLL1-201ENST00000274901 FIBPO43427 364 aa11.02□□□□□ -0.64
HMGCLL1-201ENST00000274901 FBLN1P23142 703 aa11.02□□□□□ -0.64
HMGCLL1-201ENST00000274901 CERS3Q8IU89 383 aa11.02□□□□□ -0.64
HMGCLL1-201ENST00000274901 TIGD1Q96MW7 591 aa11.02□□□□□ -0.64
HMGCLL1-201ENST00000274901 PRAM1Q96QH2 718 aa11.02□□□□□ -0.64
HMGCLL1-201ENST00000274901 FAM53CQ9NYF3 392 aa11.02□□□□□ -0.64
HMGCLL1-201ENST00000274901 RIMS2Q9UQ26 1411 aa11.02□□□□□ -0.65
HMGCLL1-201ENST00000274901 A0A1W2PP64 1363 aa11.02□□□□□ -0.65
HMGCLL1-201ENST00000274901 ERBB3P21860 1342 aa11.02□□□□□ -0.65
HMGCLL1-201ENST00000274901 WDR33Q9C0J8 1336 aaKnown RBP11.02□□□□□ -0.65
HMGCLL1-201ENST00000274901 PRKAR2BP31323 418 aa11.02□□□□□ -0.65
HMGCLL1-201ENST00000274901 CFAP44Q96MT7 982 aa11.02□□□□□ -0.65
HMGCLL1-201ENST00000274901 LARP6Q9BRS8 491 aaKnown RBP11.02□□□□□ -0.65
HMGCLL1-201ENST00000274901 IL25Q9H293 177 aa11.02□□□□□ -0.65
HMGCLL1-201ENST00000274901 RGS12O14924 1447 aa11.02□□□□□ -0.65
HMGCLL1-201ENST00000274901 TNNT1P13805 278 aa11.01□□□□□ -0.65
HMGCLL1-201ENST00000274901 RBM6P78332 1123 aaKnown RBP11.01□□□□□ -0.65
HMGCLL1-201ENST00000274901 CCDC186Q7Z3E2 898 aa11.01□□□□□ -0.65
HMGCLL1-201ENST00000274901 UBE2HP62256 183 aa11.01□□□□□ -0.65
HMGCLL1-201ENST00000274901 PAXIP1Q6ZW49 1069 aaPredicted RBP11.01□□□□□ -0.65
HMGCLL1-201ENST00000274901 KRT222Q8N1A0 295 aa11.01□□□□□ -0.65
HMGCLL1-201ENST00000274901 ZNF428Q96B54 188 aa11.01□□□□□ -0.65
HMGCLL1-201ENST00000274901 ESYT1Q9BSJ8 1104 aa11.01□□□□□ -0.65
HMGCLL1-201ENST00000274901 TNRQ92752 1358 aa11.01□□□□□ -0.65
HMGCLL1-201ENST00000274901 DIAPH1O60610 1272 aaKnown RBP11□□□□□ -0.65
HMGCLL1-201ENST00000274901 MCM2P49736 904 aa11□□□□□ -0.65
HMGCLL1-201ENST00000274901 SLC20A2Q08357 652 aa11□□□□□ -0.65
HMGCLL1-201ENST00000274901 TWISTNBQ3B726 338 aaPredicted RBP11□□□□□ -0.65
HMGCLL1-201ENST00000274901 LUZP1Q86V48 1076 aa11□□□□□ -0.65
HMGCLL1-201ENST00000274901 IFT57Q9NWB7 429 aa11□□□□□ -0.65
HMGCLL1-201ENST00000274901 ZNF446Q9NWS9 450 aa11□□□□□ -0.65
HMGCLL1-201ENST00000274901 EVC2Q86UK5 1308 aa11□□□□□ -0.65
HMGCLL1-201ENST00000274901 TUBGCP6Q96RT7 1819 aa11□□□□□ -0.65
HMGCLL1-201ENST00000274901 PDE1AP54750 535 aa11□□□□□ -0.65
HMGCLL1-201ENST00000274901 SRPK2P78362 688 aaKnown RBP11□□□□□ -0.65
HMGCLL1-201ENST00000274901 FBXO38Q6PIJ6 1188 aa11□□□□□ -0.65
HMGCLL1-201ENST00000274901 FAM135BQ49AJ0 1406 aa11□□□□□ -0.65
HMGCLL1-201ENST00000274901 YTHDC2Q9H6S0 1430 aaKnown RBP11□□□□□ -0.65
HMGCLL1-201ENST00000274901 ALKQ9UM73 1620 aa10.99□□□□□ -0.65
HMGCLL1-201ENST00000274901 CCDC66A2RUB6 948 aa10.99□□□□□ -0.65
HMGCLL1-201ENST00000274901 USP27XA6NNY8 438 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms