RNA–Protein interactions for RNA: ENST00000271620.7

PRUNE1-201, Transcript of prune exopolyphosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRUNE1, Length 2,997 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE1-201ENST00000271620 TRHP20396 242 aaPredicted RBP13.35□□□□□ -0.27
PRUNE1-201ENST00000271620 CCDC30Q5VVM6 783 aa13.35□□□□□ -0.27
PRUNE1-201ENST00000271620 ZGPATQ8N5A5 531 aaKnown RBP13.35□□□□□ -0.27
PRUNE1-201ENST00000271620 CASC1Q6TDU7 716 aa13.34□□□□□ -0.27
PRUNE1-201ENST00000271620 LRRC59Q96AG4 307 aaKnown RBP13.34□□□□□ -0.27
PRUNE1-201ENST00000271620 MAP4K4O95819 1239 aaPredicted RBP13.34□□□□□ -0.27
PRUNE1-201ENST00000271620 ESCO1Q5FWF5 840 aa13.34□□□□□ -0.27
PRUNE1-201ENST00000271620 HDGFL1Q5TGJ6 251 aa13.34□□□□□ -0.27
PRUNE1-201ENST00000271620 GBP4Q96PP9 640 aa13.34□□□□□ -0.27
PRUNE1-201ENST00000271620 KCNQ3O43525 872 aa13.33□□□□□ -0.28
PRUNE1-201ENST00000271620 NBPF6Q5VWK0 638 aa13.33□□□□□ -0.28
PRUNE1-201ENST00000271620 GAS2L3Q86XJ1 694 aa13.33□□□□□ -0.28
PRUNE1-201ENST00000271620 NBPF4Q96M43 638 aa13.33□□□□□ -0.28
PRUNE1-201ENST00000271620 TOPAZ1Q8N9V7 1692 aa13.33□□□□□ -0.28
PRUNE1-201ENST00000271620 DIP2AQ14689 1571 aa13.33□□□□□ -0.28
PRUNE1-201ENST00000271620 FSD2A1L4K1 749 aa13.33□□□□□ -0.28
PRUNE1-201ENST00000271620 TAF7Q15545 349 aaPredicted RBP13.33□□□□□ -0.28
PRUNE1-201ENST00000271620 RABEP1Q15276 862 aa13.32□□□□□ -0.28
PRUNE1-201ENST00000271620 UNC5CLQ8IV45 518 aa13.32□□□□□ -0.28
PRUNE1-201ENST00000271620 LRRCC1Q9C099 1032 aa13.32□□□□□ -0.28
PRUNE1-201ENST00000271620 RRAGDQ9NQL2 400 aaPredicted RBP13.32□□□□□ -0.28
PRUNE1-201ENST00000271620 RGPD1P0DJD0 1748 aa13.32□□□□□ -0.28
PRUNE1-201ENST00000271620 NUTM1Q86Y26 1132 aa13.32□□□□□ -0.28
PRUNE1-201ENST00000271620 USP44Q9H0E7 712 aa13.32□□□□□ -0.28
PRUNE1-201ENST00000271620 PHF8Q9UPP1 1060 aa13.32□□□□□ -0.28
PRUNE1-201ENST00000271620 PSME1Q06323 249 aa13.31□□□□□ -0.28
PRUNE1-201ENST00000271620 MPRIPQ6WCQ1 1025 aa13.31□□□□□ -0.28
PRUNE1-201ENST00000271620 CIZ1Q9ULV3 898 aaPredicted RBP13.31□□□□□ -0.28
PRUNE1-201ENST00000271620 NCLP19338 710 aaKnown RBP13.31□□□□□ -0.28
PRUNE1-201ENST00000271620 MCTP1Q6DN14 999 aa13.31□□□□□ -0.28
PRUNE1-201ENST00000271620 PIK3C2AO00443 1686 aa13.3□□□□□ -0.28
PRUNE1-201ENST00000271620 ERC2O15083 957 aa13.3□□□□□ -0.28
PRUNE1-201ENST00000271620 MX1P20591 662 aa13.3□□□□□ -0.28
PRUNE1-201ENST00000271620 ANO2Q9NQ90 1003 aa13.3□□□□□ -0.28
PRUNE1-201ENST00000271620 MAP3K5Q99683 1374 aa13.3□□□□□ -0.28
PRUNE1-201ENST00000271620 REC8O95072 547 aa13.3□□□□□ -0.28
PRUNE1-201ENST00000271620 UBTFL1P0CB47 393 aaPredicted RBP13.3□□□□□ -0.28
PRUNE1-201ENST00000271620 NEK4P51957 841 aa13.3□□□□□ -0.28
PRUNE1-201ENST00000271620 GRPEL1Q9HAV7 217 aa13.3□□□□□ -0.28
PRUNE1-201ENST00000271620 NALCNQ8IZF0 1738 aa13.3□□□□□ -0.28
PRUNE1-201ENST00000271620 GNAI3P08754 354 aa13.29□□□□□ -0.28
PRUNE1-201ENST00000271620 NBPF7P0C2Y1 421 aaPredicted RBP13.29□□□□□ -0.28
PRUNE1-201ENST00000271620 CHPF2Q9P2E5 772 aa13.29□□□□□ -0.28
PRUNE1-201ENST00000271620 PALD1Q9ULE6 856 aa13.29□□□□□ -0.28
PRUNE1-201ENST00000271620 BAG4O95429 457 aaKnown RBP13.29□□□□□ -0.28
PRUNE1-201ENST00000271620 IL25Q9H293 177 aa13.29□□□□□ -0.28
PRUNE1-201ENST00000271620 DDX49Q9Y6V7 483 aaKnown RBP13.29□□□□□ -0.28
PRUNE1-201ENST00000271620 ATP8B2P98198 1209 aa13.29□□□□□ -0.28
PRUNE1-201ENST00000271620 FOXD4L6Q3SYB3 417 aaPredicted RBP13.29□□□□□ -0.28
PRUNE1-201ENST00000271620 FOXD4L3Q6VB84 417 aaPredicted RBP13.29□□□□□ -0.28
PRUNE1-201ENST00000271620 PI4KAP2A4QPH2 592 aa13.28□□□□□ -0.28
PRUNE1-201ENST00000271620 ST18O60284 1047 aa13.28□□□□□ -0.28
PRUNE1-201ENST00000271620 EIF5BO60841 1220 aaKnown RBP13.28□□□□□ -0.28
PRUNE1-201ENST00000271620 SURF6O75683 361 aaKnown RBP13.28□□□□□ -0.28
PRUNE1-201ENST00000271620 PI4KAP1Q8N8J0 262 aa13.28□□□□□ -0.28
PRUNE1-201ENST00000271620 ORAI2Q96SN7 254 aa13.28□□□□□ -0.28
PRUNE1-201ENST00000271620 UPF3BQ9BZI7 483 aaKnown RBP13.28□□□□□ -0.28
PRUNE1-201ENST00000271620 PPP1R42Q7Z4L9 355 aa13.28□□□□□ -0.28
PRUNE1-201ENST00000271620 FAM43AQ8N2R8 423 aa13.27□□□□□ -0.28
PRUNE1-201ENST00000271620 PRAMEF22A3QJZ6 481 aa13.27□□□□□ -0.29
PRUNE1-201ENST00000271620 SRGAP3O43295 1099 aa13.27□□□□□ -0.29
PRUNE1-201ENST00000271620 DTNBO60941 627 aa13.27□□□□□ -0.29
PRUNE1-201ENST00000271620 ARHGAP23Q9P227 1491 aa13.27□□□□□ -0.29
PRUNE1-201ENST00000271620 MRE11P49959 708 aa13.26□□□□□ -0.29
PRUNE1-201ENST00000271620 SLIT1O75093 1534 aa13.26□□□□□ -0.29
PRUNE1-201ENST00000271620 HTATSF1O43719 755 aaKnown RBP13.26□□□□□ -0.29
PRUNE1-201ENST00000271620 FMN2Q9NZ56 1722 aa13.26□□□□□ -0.29
PRUNE1-201ENST00000271620 GOLGA6L22H0YM25 854 aa13.26□□□□□ -0.29
PRUNE1-201ENST00000271620 TEFQ10587 303 aa13.26□□□□□ -0.29
PRUNE1-201ENST00000271620 ZNF530Q6P9A1 599 aaPredicted RBP13.26□□□□□ -0.29
PRUNE1-201ENST00000271620 LARP6Q9BRS8 491 aaKnown RBP13.26□□□□□ -0.29
PRUNE1-201ENST00000271620 ESYT1Q9BSJ8 1104 aa13.26□□□□□ -0.29
PRUNE1-201ENST00000271620 OSBPL3Q9H4L5 887 aa13.26□□□□□ -0.29
PRUNE1-201ENST00000271620 TPRNQ4KMQ1 711 aa13.25□□□□□ -0.29
PRUNE1-201ENST00000271620 SRCIN1Q9C0H9 1055 aa13.25□□□□□ -0.29
PRUNE1-201ENST00000271620 DNAJC5Q9H3Z4 198 aa13.25□□□□□ -0.29
PRUNE1-201ENST00000271620 BTBD11A6QL63 1104 aa13.25□□□□□ -0.29
PRUNE1-201ENST00000271620 CHMLP26374 656 aa13.25□□□□□ -0.29
PRUNE1-201ENST00000271620 EIF4A1P60842 406 aaKnown RBP13.25□□□□□ -0.29
PRUNE1-201ENST00000271620 CAVIN1Q6NZI2 390 aaKnown RBP13.25□□□□□ -0.29
PRUNE1-201ENST00000271620 IP6K1Q92551 441 aa13.25□□□□□ -0.29
PRUNE1-201ENST00000271620 SALL3Q9BXA9 1300 aa13.25□□□□□ -0.29
PRUNE1-201ENST00000271620 IBTKQ9P2D0 1353 aaPredicted RBP13.25□□□□□ -0.29
PRUNE1-201ENST00000271620 PRPF40AO75400 957 aaKnown RBP13.24□□□□□ -0.29
PRUNE1-201ENST00000271620 NWD1Q149M9 1564 aa13.24□□□□□ -0.29
PRUNE1-201ENST00000271620 ZDHHC9Q9Y397 364 aa13.24□□□□□ -0.29
PRUNE1-201ENST00000271620 PROSER3Q2NL68 480 aa13.23□□□□□ -0.29
PRUNE1-201ENST00000271620 ANKLE2Q86XL3 938 aa13.23□□□□□ -0.29
PRUNE1-201ENST00000271620 TMX3Q96JJ7 454 aa13.23□□□□□ -0.29
PRUNE1-201ENST00000271620 SOS1Q07889 1333 aaPredicted RBP13.23□□□□□ -0.29
PRUNE1-201ENST00000271620 AIMP1Q12904 312 aaKnown RBP13.22□□□□□ -0.29
PRUNE1-201ENST00000271620 RBM27Q9P2N5 1060 aaKnown RBP13.22□□□□□ -0.29
PRUNE1-201ENST00000271620 AXIN2Q9Y2T1 843 aa13.22□□□□□ -0.29
PRUNE1-201ENST00000271620 GCP02774 474 aa13.22□□□□□ -0.29
PRUNE1-201ENST00000271620 NUCB2P80303 420 aa13.22□□□□□ -0.29
PRUNE1-201ENST00000271620 OS9Q13438 667 aaPredicted RBP13.22□□□□□ -0.29
PRUNE1-201ENST00000271620 CWF19L2Q2TBE0 894 aaKnown RBP13.22□□□□□ -0.29
PRUNE1-201ENST00000271620 SKOR2Q2VWA4 1001 aaPredicted RBP13.22□□□□□ -0.29
PRUNE1-201ENST00000271620 RHPN1Q8TCX5 695 aa13.22□□□□□ -0.29
PRUNE1-201ENST00000271620 DNAAF4Q8WXU2 420 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms