RNA–Protein interactions for RNA: ENST00000269217.10

LAMA3-201, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best) BASIC

Gene LAMA3, Length 5,671 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-201ENST00000269217 IQCEQ6IPM2 695 aa11.98□□□□□ -0.49
LAMA3-201ENST00000269217 PTPRCP08575 1304 aa11.98□□□□□ -0.49
LAMA3-201ENST00000269217 RRP9O43818 475 aaKnown RBP11.97□□□□□ -0.49
LAMA3-201ENST00000269217 TRIM27P14373 513 aa11.97□□□□□ -0.49
LAMA3-201ENST00000269217 AIDAQ96BJ3 306 aa11.97□□□□□ -0.49
LAMA3-201ENST00000269217 TSPYL1Q9H0U9 437 aa11.97□□□□□ -0.49
LAMA3-201ENST00000269217 BMP2KQ9NSY1 1161 aaPredicted RBP11.97□□□□□ -0.49
LAMA3-201ENST00000269217 IDH1O75874 414 aaKnown RBP11.97□□□□□ -0.49
LAMA3-201ENST00000269217 FERMT3Q86UX7 667 aa11.97□□□□□ -0.49
LAMA3-201ENST00000269217 RAI14Q9P0K7 980 aa11.97□□□□□ -0.49
LAMA3-201ENST00000269217 WAPLQ7Z5K2 1190 aa11.97□□□□□ -0.49
LAMA3-201ENST00000269217 ZHX3Q9H4I2 956 aa11.97□□□□□ -0.49
LAMA3-201ENST00000269217 LRP2BPQ9P2M1 347 aa11.97□□□□□ -0.49
LAMA3-201ENST00000269217 SKIDA1Q1XH10 827 aa11.97□□□□□ -0.49
LAMA3-201ENST00000269217 HMGB1P09429 215 aaKnown RBP11.96□□□□□ -0.49
LAMA3-201ENST00000269217 IGHMBP2P38935 993 aaKnown RBP11.96□□□□□ -0.49
LAMA3-201ENST00000269217 AMOTQ4VCS5 1084 aa11.96□□□□□ -0.49
LAMA3-201ENST00000269217 SKAP1Q86WV1 359 aa11.96□□□□□ -0.49
LAMA3-201ENST00000269217 ANO10Q9NW15 660 aa11.96□□□□□ -0.49
LAMA3-201ENST00000269217 CFAP100Q494V2 611 aa11.96□□□□□ -0.49
LAMA3-201ENST00000269217 NME9Q86XW9 330 aa11.96□□□□□ -0.49
LAMA3-201ENST00000269217 PDCL2Q8N4E4 241 aa11.96□□□□□ -0.49
LAMA3-201ENST00000269217 PLB1Q6P1J6 1458 aa11.96□□□□□ -0.5
LAMA3-201ENST00000269217 EPB41L2O43491 1005 aaKnown RBP11.96□□□□□ -0.5
LAMA3-201ENST00000269217 CAMK4Q16566 473 aa11.96□□□□□ -0.5
LAMA3-201ENST00000269217 BMP2KLQ5H9B9 411 aa11.96□□□□□ -0.5
LAMA3-201ENST00000269217 CNKSR2Q8WXI2 1034 aa11.96□□□□□ -0.5
LAMA3-201ENST00000269217 TNPO1Q92973 898 aaKnown RBP11.96□□□□□ -0.5
LAMA3-201ENST00000269217 LIMCH1Q9UPQ0 1083 aa11.96□□□□□ -0.5
LAMA3-201ENST00000269217 SSFA2P28290 1259 aa11.95□□□□□ -0.5
LAMA3-201ENST00000269217 TMEM132AQ24JP5 1023 aa11.95□□□□□ -0.5
LAMA3-201ENST00000269217 STARD3NLO95772 234 aa11.95□□□□□ -0.5
LAMA3-201ENST00000269217 METTL24Q5JXM2 366 aa11.95□□□□□ -0.5
LAMA3-201ENST00000269217 BOLA2Q9H3K6 86 aa11.95□□□□□ -0.5
LAMA3-201ENST00000269217 ADGRF5Q8IZF2 1346 aa11.95□□□□□ -0.5
LAMA3-201ENST00000269217 DNAAF4Q8WXU2 420 aa11.95□□□□□ -0.5
LAMA3-201ENST00000269217 EMILIN1Q9Y6C2 1016 aa11.95□□□□□ -0.5
LAMA3-201ENST00000269217 SFPQP23246 707 aaKnown RBP eCLIP11.95□□□□□ -0.5
LAMA3-201ENST00000269217 IL16Q14005 1332 aa11.94□□□□□ -0.5
LAMA3-201ENST00000269217 ARHGAP29Q52LW3 1261 aa11.94□□□□□ -0.5
LAMA3-201ENST00000269217 UBXN4Q92575 508 aa11.94□□□□□ -0.5
LAMA3-201ENST00000269217 PDCL3Q9H2J4 239 aa11.94□□□□□ -0.5
LAMA3-201ENST00000269217 LRRFIP2Q9Y608 721 aaKnown RBP11.94□□□□□ -0.5
LAMA3-201ENST00000269217 CTAGE5O15320 804 aa11.94□□□□□ -0.5
LAMA3-201ENST00000269217 IFIT1P09914 478 aaKnown RBP11.94□□□□□ -0.5
LAMA3-201ENST00000269217 ADGRL1O94910 1474 aa11.94□□□□□ -0.5
LAMA3-201ENST00000269217 F6X3S4 739 aa11.94□□□□□ -0.5
LAMA3-201ENST00000269217 ZC3H6P61129 1189 aaKnown RBP11.94□□□□□ -0.5
LAMA3-201ENST00000269217 KIAA0754O94854 1291 aa11.93□□□□□ -0.5
LAMA3-201ENST00000269217 EIF5P55010 431 aaKnown RBP11.93□□□□□ -0.5
LAMA3-201ENST00000269217 KLHL34Q8N239 644 aa11.93□□□□□ -0.5
LAMA3-201ENST00000269217 MYD88Q99836 296 aa11.93□□□□□ -0.5
LAMA3-201ENST00000269217 CCDC196A0A1B0GTZ2 297 aa11.93□□□□□ -0.5
LAMA3-201ENST00000269217 PTPN14Q15678 1187 aa11.93□□□□□ -0.5
LAMA3-201ENST00000269217 ZSCAN12O43309 604 aa11.93□□□□□ -0.5
LAMA3-201ENST00000269217 WASLO00401 505 aaPredicted RBP11.93□□□□□ -0.5
LAMA3-201ENST00000269217 WWC2Q6AWC2 1192 aa11.93□□□□□ -0.5
LAMA3-201ENST00000269217 TBC1D9Q6ZT07 1266 aa11.93□□□□□ -0.5
LAMA3-201ENST00000269217 C8orf76Q96K31 380 aa11.93□□□□□ -0.5
LAMA3-201ENST00000269217 LAMC3Q9Y6N6 1575 aa11.93□□□□□ -0.5
LAMA3-201ENST00000269217 SSBP05455 408 aaKnown RBP eCLIP11.93□□□□□ -0.5
LAMA3-201ENST00000269217 KIAA1328Q86T90 577 aa11.93□□□□□ -0.5
LAMA3-201ENST00000269217 TTC21BQ7Z4L5 1316 aa11.93□□□□□ -0.5
LAMA3-201ENST00000269217 CCDC85AQ96PX6 553 aaPredicted RBP11.92□□□□□ -0.5
LAMA3-201ENST00000269217 HYPKQ9NX55 129 aa11.92□□□□□ -0.5
LAMA3-201ENST00000269217 DBF4Q9UBU7 674 aaPredicted RBP11.92□□□□□ -0.5
LAMA3-201ENST00000269217 DISP3Q9P2K9 1392 aa11.92□□□□□ -0.5
LAMA3-201ENST00000269217 XPCQ01831 940 aaPredicted RBP11.92□□□□□ -0.5
LAMA3-201ENST00000269217 TBC1D32Q96NH3 1257 aa11.92□□□□□ -0.5
LAMA3-201ENST00000269217 CD109Q6YHK3 1445 aa11.92□□□□□ -0.5
LAMA3-201ENST00000269217 FLIIQ13045 1269 aa11.92□□□□□ -0.5
LAMA3-201ENST00000269217 SPINK5Q9NQ38 1064 aaPredicted RBP11.92□□□□□ -0.5
LAMA3-201ENST00000269217 DDX19AQ9NUU7 478 aaKnown RBP11.92□□□□□ -0.5
LAMA3-201ENST00000269217 CCDC148Q8NFR7 591 aa11.92□□□□□ -0.5
LAMA3-201ENST00000269217 EVI5LQ96CN4 794 aa11.92□□□□□ -0.5
LAMA3-201ENST00000269217 GBP3Q9H0R5 595 aa11.92□□□□□ -0.5
LAMA3-201ENST00000269217 ZNF397Q8NF99 534 aaPredicted RBP11.91□□□□□ -0.5
LAMA3-201ENST00000269217 ANKRD36BQ8N2N9 1353 aa11.91□□□□□ -0.5
LAMA3-201ENST00000269217 PHAXQ9H814 394 aaKnown RBP11.91□□□□□ -0.5
LAMA3-201ENST00000269217 ZNF287Q9HBT7 754 aa11.91□□□□□ -0.5
LAMA3-201ENST00000269217 ABCF2Q9UG63 623 aa11.91□□□□□ -0.5
LAMA3-201ENST00000269217 CCDC8Q9H0W5 538 aaPredicted RBP11.91□□□□□ -0.5
LAMA3-201ENST00000269217 GRIN2AQ12879 1464 aa11.91□□□□□ -0.5
LAMA3-201ENST00000269217 KIF18AQ8NI77 898 aa11.91□□□□□ -0.5
LAMA3-201ENST00000269217 NAPBQ9H115 298 aa11.91□□□□□ -0.5
LAMA3-201ENST00000269217 NOS1P29475 1434 aa11.91□□□□□ -0.5
LAMA3-201ENST00000269217 NEFHP12036 1026 aa11.91□□□□□ -0.5
LAMA3-201ENST00000269217 ECHDC1Q9NTX5 307 aa11.91□□□□□ -0.5
LAMA3-201ENST00000269217 TMCO3Q6UWJ1 677 aa11.9□□□□□ -0.5
LAMA3-201ENST00000269217 FBXO3Q9UK99 471 aa11.9□□□□□ -0.5
LAMA3-201ENST00000269217 RALGAPBQ86X10 1494 aa11.9□□□□□ -0.5
LAMA3-201ENST00000269217 IGHDP01880 384 aa11.9□□□□□ -0.5
LAMA3-201ENST00000269217 TAF4BQ92750 862 aa11.9□□□□□ -0.5
LAMA3-201ENST00000269217 TTC22Q5TAA0 569 aa11.9□□□□□ -0.5
LAMA3-201ENST00000269217 C14orf93Q9H972 538 aaKnown RBP11.9□□□□□ -0.5
LAMA3-201ENST00000269217 CLIP2Q9UDT6 1046 aa11.9□□□□□ -0.5
LAMA3-201ENST00000269217 NEMFO60524 1076 aa11.9□□□□□ -0.51
LAMA3-201ENST00000269217 HDAC1Q13547 482 aaPredicted RBP11.9□□□□□ -0.51
LAMA3-201ENST00000269217 ZNF652Q9Y2D9 606 aa11.9□□□□□ -0.51
LAMA3-201ENST00000269217 CCDC102AQ96A19 550 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms