RNA–Protein interactions for RNA: ENST00000268704.6

SPG7-201, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPG7, Length 3,076 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-201ENST00000268704 RILPL2Q969X0 211 aa20.83■□□□□ 0.92
SPG7-201ENST00000268704 ACEP12821 1306 aa20.82■□□□□ 0.92
SPG7-201ENST00000268704 PNMA6EA0A0J9YXQ4 647 aa20.82■□□□□ 0.92
SPG7-201ENST00000268704 OFD1O75665 1012 aa20.82■□□□□ 0.92
SPG7-201ENST00000268704 MTHFSDQ2M296 383 aaKnown RBP20.82■□□□□ 0.92
SPG7-201ENST00000268704 TPM2P07951 284 aa20.81■□□□□ 0.92
SPG7-201ENST00000268704 PDLIM2Q96JY6 352 aa20.81■□□□□ 0.92
SPG7-201ENST00000268704 ESYT1Q9BSJ8 1104 aa20.81■□□□□ 0.92
SPG7-201ENST00000268704 ANO2Q9NQ90 1003 aa20.81■□□□□ 0.92
SPG7-201ENST00000268704 SPATA31D1Q6ZQQ2 1576 aa20.81■□□□□ 0.92
SPG7-201ENST00000268704 TRIM6-TRIM34B2RNG4 842 aa20.81■□□□□ 0.92
SPG7-201ENST00000268704 UPF3BQ9BZI7 483 aaKnown RBP20.81■□□□□ 0.92
SPG7-201ENST00000268704 OSBPL3Q9H4L5 887 aa20.81■□□□□ 0.92
SPG7-201ENST00000268704 LRSAM1Q6UWE0 723 aa20.8■□□□□ 0.92
SPG7-201ENST00000268704 UNC5CLQ8IV45 518 aa20.8■□□□□ 0.92
SPG7-201ENST00000268704 GDPD2Q9HCC8 539 aa20.8■□□□□ 0.92
SPG7-201ENST00000268704 ROBO2Q9HCK4 1378 aa20.8■□□□□ 0.92
SPG7-201ENST00000268704 R3HCC1Q9Y3T6 440 aaKnown RBP20.8■□□□□ 0.92
SPG7-201ENST00000268704 GNAI2P04899 355 aa20.79■□□□□ 0.92
SPG7-201ENST00000268704 RBM10P98175 930 aaKnown RBP20.79■□□□□ 0.92
SPG7-201ENST00000268704 IL25Q9H293 177 aa20.79■□□□□ 0.92
SPG7-201ENST00000268704 SALL3Q9BXA9 1300 aa20.79■□□□□ 0.92
SPG7-201ENST00000268704 OVOS2A0A0J9YW53 1432 aa20.79■□□□□ 0.92
SPG7-201ENST00000268704 OVOS2Q6IE36 1432 aa20.79■□□□□ 0.92
SPG7-201ENST00000268704 MX1P20591 662 aa20.79■□□□□ 0.92
SPG7-201ENST00000268704 NOL7Q9UMY1 257 aaKnown RBP20.79■□□□□ 0.92
SPG7-201ENST00000268704 CCT4P50991 539 aaKnown RBP20.78■□□□□ 0.92
SPG7-201ENST00000268704 TPRNQ4KMQ1 711 aa20.78■□□□□ 0.92
SPG7-201ENST00000268704 RTF1Q92541 710 aaKnown RBP20.78■□□□□ 0.92
SPG7-201ENST00000268704 LRRCC1Q9C099 1032 aa20.78■□□□□ 0.92
SPG7-201ENST00000268704 FKBP5Q13451 457 aaPredicted RBP20.77■□□□□ 0.92
SPG7-201ENST00000268704 RGPD1P0DJD0 1748 aa20.77■□□□□ 0.92
SPG7-201ENST00000268704 BRD1O95696 1058 aa20.76■□□□□ 0.91
SPG7-201ENST00000268704 CHMLP26374 656 aa20.76■□□□□ 0.91
SPG7-201ENST00000268704 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.76■□□□□ 0.91
SPG7-201ENST00000268704 TUBGCP6Q96RT7 1819 aa20.76■□□□□ 0.91
SPG7-201ENST00000268704 IL1RAPL2Q9NP60 686 aa20.76■□□□□ 0.91
SPG7-201ENST00000268704 A0A0U1RQG5 324 aaPredicted RBP20.75■□□□□ 0.91
SPG7-201ENST00000268704 ZBTB7CA1YPR0 619 aa20.75■□□□□ 0.91
SPG7-201ENST00000268704 MAP4K4O95819 1239 aaPredicted RBP20.75■□□□□ 0.91
SPG7-201ENST00000268704 LRRFIP2Q9Y608 721 aaKnown RBP20.75■□□□□ 0.91
SPG7-201ENST00000268704 FLIIQ13045 1269 aa20.74■□□□□ 0.91
SPG7-201ENST00000268704 GADD45BO75293 160 aaPredicted RBP20.74■□□□□ 0.91
SPG7-201ENST00000268704 MPNDQ8N594 471 aa20.74■□□□□ 0.91
SPG7-201ENST00000268704 STK31Q9BXU1 1019 aa20.74■□□□□ 0.91
SPG7-201ENST00000268704 CUL4AQ13619 759 aa20.73■□□□□ 0.91
SPG7-201ENST00000268704 PODXL2Q9NZ53 605 aa20.73■□□□□ 0.91
SPG7-201ENST00000268704 HS1BP3Q53T59 392 aa20.73■□□□□ 0.91
SPG7-201ENST00000268704 ZKSCAN5Q9Y2L8 839 aa20.73■□□□□ 0.91
SPG7-201ENST00000268704 TECPR2O15040 1411 aa20.73■□□□□ 0.91
SPG7-201ENST00000268704 USP6P35125 1406 aa20.73■□□□□ 0.91
SPG7-201ENST00000268704 TCHHQ07283 1943 aa20.73■□□□□ 0.91
SPG7-201ENST00000268704 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.72■□□□□ 0.91
SPG7-201ENST00000268704 DTNBO60941 627 aa20.72■□□□□ 0.91
SPG7-201ENST00000268704 MCCP23508 829 aa20.72■□□□□ 0.91
SPG7-201ENST00000268704 LARP6Q9BRS8 491 aaKnown RBP20.72■□□□□ 0.91
SPG7-201ENST00000268704 CEP170BQ9Y4F5 1589 aaPredicted RBP20.72■□□□□ 0.91
SPG7-201ENST00000268704 ZNF500O60304 480 aaPredicted RBP20.72■□□□□ 0.91
SPG7-201ENST00000268704 NUTM1Q86Y26 1132 aa20.72■□□□□ 0.91
SPG7-201ENST00000268704 MBD3O95983 291 aa20.71■□□□□ 0.91
SPG7-201ENST00000268704 EYA1Q99502 592 aa20.71■□□□□ 0.91
SPG7-201ENST00000268704 ATP8B2P98198 1209 aa20.7■□□□□ 0.9
SPG7-201ENST00000268704 NALCNQ8IZF0 1738 aa20.7■□□□□ 0.9
SPG7-201ENST00000268704 FAM13BQ9NYF5 915 aa20.69■□□□□ 0.9
SPG7-201ENST00000268704 MCM2P49736 904 aa20.69■□□□□ 0.9
SPG7-201ENST00000268704 ARHGEF10O15013 1369 aa20.69■□□□□ 0.9
SPG7-201ENST00000268704 FMN2Q9NZ56 1722 aa20.68■□□□□ 0.9
SPG7-201ENST00000268704 GNAI3P08754 354 aa20.68■□□□□ 0.9
SPG7-201ENST00000268704 TSPY26PQ9H489 355 aa20.68■□□□□ 0.9
SPG7-201ENST00000268704 XRN1Q8IZH2 1706 aaKnown RBP20.68■□□□□ 0.9
SPG7-201ENST00000268704 AGLP35573 1532 aa20.67■□□□□ 0.9
SPG7-201ENST00000268704 USP48Q86UV5 1035 aa20.67■□□□□ 0.9
SPG7-201ENST00000268704 FAM208AQ9UK61 1670 aaKnown RBP20.67■□□□□ 0.9
SPG7-201ENST00000268704 USP31Q70CQ4 1352 aa20.67■□□□□ 0.9
SPG7-201ENST00000268704 UQCRHLA0A096LP55 91 aa20.67■□□□□ 0.9
SPG7-201ENST00000268704 UQCRHP07919 91 aa20.67■□□□□ 0.9
SPG7-201ENST00000268704 AMPHP49418 695 aa20.67■□□□□ 0.9
SPG7-201ENST00000268704 SIRT1Q96EB6 747 aa20.67■□□□□ 0.9
SPG7-201ENST00000268704 USP44Q9H0E7 712 aa20.67■□□□□ 0.9
SPG7-201ENST00000268704 PDCL3Q9H2J4 239 aa20.67■□□□□ 0.9
SPG7-201ENST00000268704 TOPAZ1Q8N9V7 1692 aa20.66■□□□□ 0.9
SPG7-201ENST00000268704 PLEKHG3A1L390 1219 aa20.66■□□□□ 0.9
SPG7-201ENST00000268704 ANAPC15P60006 121 aa20.66■□□□□ 0.9
SPG7-201ENST00000268704 INTS4Q96HW7 963 aaKnown RBP20.66■□□□□ 0.9
SPG7-201ENST00000268704 PPP6R1Q9UPN7 881 aa20.66■□□□□ 0.9
SPG7-201ENST00000268704 CCDC30Q5VVM6 783 aa20.66■□□□□ 0.9
SPG7-201ENST00000268704 NUTM2GQ5VZR2 741 aa20.66■□□□□ 0.9
SPG7-201ENST00000268704 CCDC39Q9UFE4 941 aa20.66■□□□□ 0.9
SPG7-201ENST00000268704 PTMAP06454 111 aaKnown RBP20.65■□□□□ 0.9
SPG7-201ENST00000268704 SLC26A8Q96RN1 970 aa20.65■□□□□ 0.9
SPG7-201ENST00000268704 ESF1Q9H501 851 aaKnown RBP20.65■□□□□ 0.9
SPG7-201ENST00000268704 PHAXQ9H814 394 aaKnown RBP20.65■□□□□ 0.9
SPG7-201ENST00000268704 STAP2Q9UGK3 403 aa20.65■□□□□ 0.9
SPG7-201ENST00000268704 SRCIN1Q9C0H9 1055 aa20.64■□□□□ 0.9
SPG7-201ENST00000268704 FLT4P35916 1363 aa20.64■□□□□ 0.9
SPG7-201ENST00000268704 UBTFL1P0CB47 393 aaPredicted RBP20.64■□□□□ 0.89
SPG7-201ENST00000268704 KDRP35968 1356 aa20.64■□□□□ 0.89
SPG7-201ENST00000268704 RPAP1Q9BWH6 1393 aaPredicted RBP20.64■□□□□ 0.89
SPG7-201ENST00000268704 LTV1Q96GA3 475 aaPredicted RBP20.63■□□□□ 0.89
SPG7-201ENST00000268704 CNPY2Q9Y2B0 182 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms