RNA–Protein interactions for RNA: ENST00000265732.9

RBM48-201, Transcript of RNA binding motif protein 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBM48, Length 1,742 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM48-201ENST00000265732 DCTN1Q14203 1278 aa12.92□□□□□ -0.34
RBM48-201ENST00000265732 IL17REQ8NFR9 667 aa12.92□□□□□ -0.34
RBM48-201ENST00000265732 SENP3-EIF4A1A0A087X0R7 540 aa12.91□□□□□ -0.34
RBM48-201ENST00000265732 PLSCR1O15162 318 aa12.91□□□□□ -0.34
RBM48-201ENST00000265732 HTATSF1O43719 755 aaKnown RBP12.91□□□□□ -0.34
RBM48-201ENST00000265732 SLC52A2Q9HAB3 445 aa12.91□□□□□ -0.34
RBM48-201ENST00000265732 ADAMTS7Q9UKP4 1686 aa12.91□□□□□ -0.34
RBM48-201ENST00000265732 LMOD3Q0VAK6 560 aa12.91□□□□□ -0.34
RBM48-201ENST00000265732 EZH2Q15910 746 aaKnown RBP12.91□□□□□ -0.34
RBM48-201ENST00000265732 RGPD3A6NKT7 1758 aaPredicted RBP12.9□□□□□ -0.34
RBM48-201ENST00000265732 RGPD4Q7Z3J3 1758 aa12.9□□□□□ -0.34
RBM48-201ENST00000265732 ASAP1Q9ULH1 1129 aa12.9□□□□□ -0.34
RBM48-201ENST00000265732 SIPA1L3O60292 1781 aaPredicted RBP12.9□□□□□ -0.34
RBM48-201ENST00000265732 LY75O60449 1722 aa12.89□□□□□ -0.35
RBM48-201ENST00000265732 SMARCC1Q92922 1105 aaPredicted RBP12.89□□□□□ -0.35
RBM48-201ENST00000265732 CAMKK2Q96RR4 588 aa12.89□□□□□ -0.35
RBM48-201ENST00000265732 CEMIPQ8WUJ3 1361 aa12.89□□□□□ -0.35
RBM48-201ENST00000265732 SRCAPQ6ZRS2 3230 aa12.88□□□□□ -0.35
RBM48-201ENST00000265732 THUMPD2Q9BTF0 503 aaKnown RBP12.88□□□□□ -0.35
RBM48-201ENST00000265732 PALLDQ8WX93 1383 aa12.88□□□□□ -0.35
RBM48-201ENST00000265732 TXNRD1Q16881 649 aa12.88□□□□□ -0.35
RBM48-201ENST00000265732 ATG3Q9NT62 314 aa12.88□□□□□ -0.35
RBM48-201ENST00000265732 SALL2Q9Y467 1007 aaPredicted RBP12.88□□□□□ -0.35
RBM48-201ENST00000265732 MRC1P22897 1456 aa12.87□□□□□ -0.35
RBM48-201ENST00000265732 BTBD11A6QL63 1104 aa12.87□□□□□ -0.35
RBM48-201ENST00000265732 SLC39A6Q13433 755 aa12.87□□□□□ -0.35
RBM48-201ENST00000265732 TTC5Q8N0Z6 440 aa12.87□□□□□ -0.35
RBM48-201ENST00000265732 RBM42Q9BTD8 480 aaKnown RBP12.87□□□□□ -0.35
RBM48-201ENST00000265732 PTCD1O75127 700 aaKnown RBP12.86□□□□□ -0.35
RBM48-201ENST00000265732 KCNQ4P56696 695 aa12.86□□□□□ -0.35
RBM48-201ENST00000265732 CCNL1Q9UK58 526 aaPredicted RBP12.86□□□□□ -0.35
RBM48-201ENST00000265732 RREB1Q92766 1687 aa12.86□□□□□ -0.35
RBM48-201ENST00000265732 TAF7Q15545 349 aaPredicted RBP12.85□□□□□ -0.35
RBM48-201ENST00000265732 SLC27A3Q5K4L6 730 aa12.85□□□□□ -0.35
RBM48-201ENST00000265732 PROM2Q8N271 834 aa12.85□□□□□ -0.35
RBM48-201ENST00000265732 TRIM35Q9UPQ4 493 aa12.85□□□□□ -0.35
RBM48-201ENST00000265732 TAF1LQ8IZX4 1826 aa12.85□□□□□ -0.35
RBM48-201ENST00000265732 LOC102724428A0A0B4J2F2 783 aa12.85□□□□□ -0.35
RBM48-201ENST00000265732 SIK1P57059 783 aa12.85□□□□□ -0.35
RBM48-201ENST00000265732 ZNF790Q6PG37 636 aa12.85□□□□□ -0.35
RBM48-201ENST00000265732 LAS1LQ9Y4W2 734 aaKnown RBP12.85□□□□□ -0.35
RBM48-201ENST00000265732 NUP188Q5SRE5 1749 aa12.84□□□□□ -0.35
RBM48-201ENST00000265732 ATP6V1AP38606 617 aa12.84□□□□□ -0.35
RBM48-201ENST00000265732 MIS18AQ9NYP9 233 aa12.84□□□□□ -0.35
RBM48-201ENST00000265732 PAPPAQ13219 1627 aa12.83□□□□□ -0.35
RBM48-201ENST00000265732 LRRC4BQ9NT99 713 aa12.83□□□□□ -0.36
RBM48-201ENST00000265732 C5P01031 1676 aa12.83□□□□□ -0.36
RBM48-201ENST00000265732 UBR2Q8IWV8 1755 aa12.83□□□□□ -0.36
RBM48-201ENST00000265732 CALD1Q05682 793 aaKnown RBP12.82□□□□□ -0.36
RBM48-201ENST00000265732 NBPF14Q5TI25 921 aa12.82□□□□□ -0.36
RBM48-201ENST00000265732 HMGB2P26583 209 aaKnown RBP12.82□□□□□ -0.36
RBM48-201ENST00000265732 WWC1Q8IX03 1113 aa12.82□□□□□ -0.36
RBM48-201ENST00000265732 TSPYL4Q9UJ04 414 aa12.82□□□□□ -0.36
RBM48-201ENST00000265732 KDM3BQ7LBC6 1761 aa12.81□□□□□ -0.36
RBM48-201ENST00000265732 KCNQ3O43525 872 aa12.81□□□□□ -0.36
RBM48-201ENST00000265732 CCDC27Q2M243 656 aa12.81□□□□□ -0.36
RBM48-201ENST00000265732 FMNL2Q96PY5 1086 aa12.81□□□□□ -0.36
RBM48-201ENST00000265732 NGEFQ8N5V2 710 aa12.8□□□□□ -0.36
RBM48-201ENST00000265732 ZNF496Q96IT1 587 aaPredicted RBP12.8□□□□□ -0.36
RBM48-201ENST00000265732 ZNF831Q5JPB2 1677 aa12.8□□□□□ -0.36
RBM48-201ENST00000265732 SLC4A9Q96Q91 983 aa12.79□□□□□ -0.36
RBM48-201ENST00000265732 MYH14Q7Z406 1995 aaKnown RBP12.79□□□□□ -0.36
RBM48-201ENST00000265732 KCPQ6ZWJ8 1503 aa12.79□□□□□ -0.36
RBM48-201ENST00000265732 ADRA2BP18089 450 aa12.79□□□□□ -0.36
RBM48-201ENST00000265732 ITPK1Q13572 414 aa12.79□□□□□ -0.36
RBM48-201ENST00000265732 NCBP3Q53F19 620 aaKnown RBP12.79□□□□□ -0.36
RBM48-201ENST00000265732 CFAP44Q96MT7 982 aa12.79□□□□□ -0.36
RBM48-201ENST00000265732 STK32BQ9NY57 414 aa12.79□□□□□ -0.36
RBM48-201ENST00000265732 C4BP0C0L5 1744 aa12.78□□□□□ -0.36
RBM48-201ENST00000265732 COL5A3P25940 1745 aaPredicted RBP12.78□□□□□ -0.36
RBM48-201ENST00000265732 GNAI1P63096 354 aa12.78□□□□□ -0.36
RBM48-201ENST00000265732 VSIG10Q8N0Z9 540 aa12.78□□□□□ -0.36
RBM48-201ENST00000265732 BABAM1Q9NWV8 329 aa12.78□□□□□ -0.36
RBM48-201ENST00000265732 TFCP2L1Q9NZI6 479 aa12.78□□□□□ -0.36
RBM48-201ENST00000265732 TJP1Q07157 1748 aa12.78□□□□□ -0.36
RBM48-201ENST00000265732 HEG1Q9ULI3 1381 aa12.78□□□□□ -0.36
RBM48-201ENST00000265732 CHL1O00533 1208 aa12.77□□□□□ -0.36
RBM48-201ENST00000265732 DNAJC10Q8IXB1 793 aa12.77□□□□□ -0.36
RBM48-201ENST00000265732 LINC00116Q8NCU8 138 aa12.77□□□□□ -0.36
RBM48-201ENST00000265732 AK7Q96M32 723 aa12.77□□□□□ -0.36
RBM48-201ENST00000265732 ANO8Q9HCE9 1232 aaPredicted RBP12.77□□□□□ -0.36
RBM48-201ENST00000265732 IFT57Q9NWB7 429 aa12.77□□□□□ -0.36
RBM48-201ENST00000265732 TUBGCP6Q96RT7 1819 aa12.76□□□□□ -0.37
RBM48-201ENST00000265732 PSDA5PKW4 1024 aaPredicted RBP12.76□□□□□ -0.37
RBM48-201ENST00000265732 STARD3NLO95772 234 aa12.76□□□□□ -0.37
RBM48-201ENST00000265732 SNRPA1P09661 255 aaKnown RBP12.76□□□□□ -0.37
RBM48-201ENST00000265732 R3HDM1Q15032 1099 aaKnown RBP12.76□□□□□ -0.37
RBM48-201ENST00000265732 SLC15A2Q16348 729 aa12.76□□□□□ -0.37
RBM48-201ENST00000265732 TEX13AQ9BXU3 409 aaPredicted RBP12.76□□□□□ -0.37
RBM48-201ENST00000265732 EIF4A1P60842 406 aaKnown RBP12.76□□□□□ -0.37
RBM48-201ENST00000265732 HNRNPUQ00839 825 aaKnown RBP eCLIP12.76□□□□□ -0.37
RBM48-201ENST00000265732 ZNF827Q17R98 1081 aa12.76□□□□□ -0.37
RBM48-201ENST00000265732 WDR63Q8IWG1 891 aa12.76□□□□□ -0.37
RBM48-201ENST00000265732 MBIPQ9NS73 344 aa12.76□□□□□ -0.37
RBM48-201ENST00000265732 UBR3Q6ZT12 1888 aa12.76□□□□□ -0.37
RBM48-201ENST00000265732 GNPATO15228 680 aa12.75□□□□□ -0.37
RBM48-201ENST00000265732 CRKLP46109 303 aaKnown RBP12.75□□□□□ -0.37
RBM48-201ENST00000265732 CICQ96RK0 1608 aaPredicted RBP12.75□□□□□ -0.37
RBM48-201ENST00000265732 PRAMEF22A3QJZ6 481 aa12.74□□□□□ -0.37
RBM48-201ENST00000265732 ZNF853P0CG23 659 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms