RNA–Protein interactions for RNA: ENST00000265598.7

LAMP3-201, Transcript of lysosomal associated membrane protein 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene LAMP3, Length 3,375 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP3-201ENST00000265598 NFAT5O94916 1531 aa13.77□□□□□ -0.2
LAMP3-201ENST00000265598 C16orf71Q8IYS4 520 aaPredicted RBP13.77□□□□□ -0.21
LAMP3-201ENST00000265598 EIF4A1P60842 406 aaKnown RBP13.76□□□□□ -0.21
LAMP3-201ENST00000265598 CCT4P50991 539 aaKnown RBP13.76□□□□□ -0.21
LAMP3-201ENST00000265598 EVA1CP58658 441 aa13.76□□□□□ -0.21
LAMP3-201ENST00000265598 NFATC2IPQ8NCF5 419 aa13.76□□□□□ -0.21
LAMP3-201ENST00000265598 SPRYD3Q8NCJ5 442 aa13.76□□□□□ -0.21
LAMP3-201ENST00000265598 EXOC6BQ9Y2D4 811 aa13.75□□□□□ -0.21
LAMP3-201ENST00000265598 NWD1Q149M9 1564 aa13.75□□□□□ -0.21
LAMP3-201ENST00000265598 PIP4K2AP48426 406 aaPredicted RBP13.75□□□□□ -0.21
LAMP3-201ENST00000265598 SPATA31A3Q5VYP0 1347 aa13.75□□□□□ -0.21
LAMP3-201ENST00000265598 CEP85Q6P2H3 762 aa13.75□□□□□ -0.21
LAMP3-201ENST00000265598 A0A0G2JS52 829 aa13.74□□□□□ -0.21
LAMP3-201ENST00000265598 PI4KAP2A4QPH2 592 aa13.74□□□□□ -0.21
LAMP3-201ENST00000265598 PI4KAP1Q8N8J0 262 aa13.74□□□□□ -0.21
LAMP3-201ENST00000265598 DDX54Q8TDD1 881 aaKnown RBP13.74□□□□□ -0.21
LAMP3-201ENST00000265598 MARF1Q9Y4F3 1742 aaKnown RBP13.74□□□□□ -0.21
LAMP3-201ENST00000265598 RGPD2P0DJD1 1756 aa13.74□□□□□ -0.21
LAMP3-201ENST00000265598 MYL6BP14649 208 aa13.74□□□□□ -0.21
LAMP3-201ENST00000265598 SPG7Q9UQ90 795 aa13.74□□□□□ -0.21
LAMP3-201ENST00000265598 GNAI2P04899 355 aa13.74□□□□□ -0.21
LAMP3-201ENST00000265598 HMMRO75330 724 aa13.73□□□□□ -0.21
LAMP3-201ENST00000265598 ANKRD44Q8N8A2 993 aa13.73□□□□□ -0.21
LAMP3-201ENST00000265598 OTUD7AQ8TE49 926 aaPredicted RBP13.73□□□□□ -0.21
LAMP3-201ENST00000265598 LRRFIP2Q9Y608 721 aaKnown RBP13.73□□□□□ -0.21
LAMP3-201ENST00000265598 RPAP2Q8IXW5 612 aaPredicted RBP13.73□□□□□ -0.21
LAMP3-201ENST00000265598 PXDNQ92626 1479 aa13.73□□□□□ -0.21
LAMP3-201ENST00000265598 UBTFL1P0CB47 393 aaPredicted RBP13.72□□□□□ -0.21
LAMP3-201ENST00000265598 RTL5Q5HYW3 569 aaPredicted RBP13.72□□□□□ -0.21
LAMP3-201ENST00000265598 KAT6BQ8WYB5 2073 aa13.72□□□□□ -0.21
LAMP3-201ENST00000265598 PROSER3Q2NL68 480 aa13.72□□□□□ -0.21
LAMP3-201ENST00000265598 TTC5Q8N0Z6 440 aa13.72□□□□□ -0.21
LAMP3-201ENST00000265598 SRCIN1Q9C0H9 1055 aa13.71□□□□□ -0.21
LAMP3-201ENST00000265598 SLKQ9H2G2 1235 aaPredicted RBP13.71□□□□□ -0.21
LAMP3-201ENST00000265598 TNS3Q68CZ2 1445 aa13.71□□□□□ -0.21
LAMP3-201ENST00000265598 STRCP1A6NGW2 1772 aa13.71□□□□□ -0.21
LAMP3-201ENST00000265598 RGS12O14924 1447 aa13.71□□□□□ -0.21
LAMP3-201ENST00000265598 TSHZ3Q63HK5 1081 aa13.71□□□□□ -0.21
LAMP3-201ENST00000265598 IFNL2Q8IZJ0 200 aa13.71□□□□□ -0.21
LAMP3-201ENST00000265598 DCTPP1Q9H773 170 aa13.71□□□□□ -0.21
LAMP3-201ENST00000265598 GNAI3P08754 354 aa13.71□□□□□ -0.22
LAMP3-201ENST00000265598 CEMIPQ8WUJ3 1361 aa13.7□□□□□ -0.22
LAMP3-201ENST00000265598 CABP4P57796 275 aa13.7□□□□□ -0.22
LAMP3-201ENST00000265598 C22orf23Q9BZE7 217 aa13.7□□□□□ -0.22
LAMP3-201ENST00000265598 ZNF330Q9Y3S2 320 aaPredicted RBP13.7□□□□□ -0.22
LAMP3-201ENST00000265598 PNMA6EA0A0J9YXQ4 647 aa13.69□□□□□ -0.22
LAMP3-201ENST00000265598 ARXQ96QS3 562 aa13.69□□□□□ -0.22
LAMP3-201ENST00000265598 PHKG2P15735 406 aa13.69□□□□□ -0.22
LAMP3-201ENST00000265598 DNAAF4Q8WXU2 420 aa13.69□□□□□ -0.22
LAMP3-201ENST00000265598 C9orf78Q9NZ63 289 aaPredicted RBP13.69□□□□□ -0.22
LAMP3-201ENST00000265598 DBF4Q9UBU7 674 aaPredicted RBP13.69□□□□□ -0.22
LAMP3-201ENST00000265598 GIGYF1O75420 1035 aaPredicted RBP13.69□□□□□ -0.22
LAMP3-201ENST00000265598 BABAM1Q9NWV8 329 aa13.69□□□□□ -0.22
LAMP3-201ENST00000265598 LMTK3Q96Q04 1460 aa13.69□□□□□ -0.22
LAMP3-201ENST00000265598 CYP27B1O15528 508 aa13.68□□□□□ -0.22
LAMP3-201ENST00000265598 ZNF790Q6PG37 636 aa13.68□□□□□ -0.22
LAMP3-201ENST00000265598 MAP3K2Q9Y2U5 619 aa13.68□□□□□ -0.22
LAMP3-201ENST00000265598 OS9Q13438 667 aaPredicted RBP13.68□□□□□ -0.22
LAMP3-201ENST00000265598 IL1RAPL2Q9NP60 686 aa13.68□□□□□ -0.22
LAMP3-201ENST00000265598 RGPD5Q99666 1765 aa13.68□□□□□ -0.22
LAMP3-201ENST00000265598 MED1Q15648 1581 aaPredicted RBP13.68□□□□□ -0.22
LAMP3-201ENST00000265598 PTCD1O75127 700 aaKnown RBP13.68□□□□□ -0.22
LAMP3-201ENST00000265598 NBPF7P0C2Y1 421 aaPredicted RBP13.68□□□□□ -0.22
LAMP3-201ENST00000265598 BECN1Q14457 450 aa13.68□□□□□ -0.22
LAMP3-201ENST00000265598 CWF19L2Q2TBE0 894 aaKnown RBP13.68□□□□□ -0.22
LAMP3-201ENST00000265598 USP44Q9H0E7 712 aa13.68□□□□□ -0.22
LAMP3-201ENST00000265598 RIC3Q7Z5B4 369 aa13.67□□□□□ -0.22
LAMP3-201ENST00000265598 ZNF496Q96IT1 587 aaPredicted RBP13.67□□□□□ -0.22
LAMP3-201ENST00000265598 SLC52A2Q9HAB3 445 aa13.67□□□□□ -0.22
LAMP3-201ENST00000265598 LARP1Q6PKG0 1096 aaKnown RBP13.67□□□□□ -0.22
LAMP3-201ENST00000265598 PLEKHM2Q8IWE5 1019 aa13.67□□□□□ -0.22
LAMP3-201ENST00000265598 SLIT3O75094 1523 aa13.67□□□□□ -0.22
LAMP3-201ENST00000265598 DCCP43146 1447 aa13.67□□□□□ -0.22
LAMP3-201ENST00000265598 SURF6O75683 361 aaKnown RBP13.66□□□□□ -0.22
LAMP3-201ENST00000265598 SRGAP3O43295 1099 aa13.66□□□□□ -0.22
LAMP3-201ENST00000265598 JARID2Q92833 1246 aaPredicted RBP13.66□□□□□ -0.22
LAMP3-201ENST00000265598 TBC1D32Q96NH3 1257 aa13.66□□□□□ -0.22
LAMP3-201ENST00000265598 KIF1AQ12756 1690 aa13.66□□□□□ -0.22
LAMP3-201ENST00000265598 BMP2KLQ5H9B9 411 aa13.65□□□□□ -0.22
LAMP3-201ENST00000265598 CHMP4AQ9BY43 222 aa13.65□□□□□ -0.22
LAMP3-201ENST00000265598 MEGF6O75095 1541 aa13.65□□□□□ -0.22
LAMP3-201ENST00000265598 TBC1D9Q6ZT07 1266 aa13.65□□□□□ -0.22
LAMP3-201ENST00000265598 PPP1R42Q7Z4L9 355 aa13.65□□□□□ -0.22
LAMP3-201ENST00000265598 ZCRB1Q8TBF4 217 aaKnown RBP13.65□□□□□ -0.22
LAMP3-201ENST00000265598 USP16Q9Y5T5 823 aa13.65□□□□□ -0.22
LAMP3-201ENST00000265598 ATP10DQ9P241 1426 aa13.65□□□□□ -0.23
LAMP3-201ENST00000265598 PIP4K2BP78356 416 aa13.65□□□□□ -0.23
LAMP3-201ENST00000265598 TRIM6-TRIM34B2RNG4 842 aa13.64□□□□□ -0.23
LAMP3-201ENST00000265598 DCAF5Q96JK2 942 aa13.64□□□□□ -0.23
LAMP3-201ENST00000265598 BTG4Q9NY30 223 aa13.64□□□□□ -0.23
LAMP3-201ENST00000265598 TRPM3Q9HCF6 1732 aaPredicted RBP13.64□□□□□ -0.23
LAMP3-201ENST00000265598 ADAMTS2O95450 1211 aa13.64□□□□□ -0.23
LAMP3-201ENST00000265598 GSPT1P15170 499 aaKnown RBP13.64□□□□□ -0.23
LAMP3-201ENST00000265598 RILPL2Q969X0 211 aa13.64□□□□□ -0.23
LAMP3-201ENST00000265598 SYTL4Q96C24 671 aaPredicted RBP13.63□□□□□ -0.23
LAMP3-201ENST00000265598 LRRCC1Q9C099 1032 aa13.63□□□□□ -0.23
LAMP3-201ENST00000265598 ATP8B2P98198 1209 aa13.63□□□□□ -0.23
LAMP3-201ENST00000265598 COPS6Q7L5N1 327 aa13.63□□□□□ -0.23
LAMP3-201ENST00000265598 NCOA3Q9Y6Q9 1424 aa13.63□□□□□ -0.23
LAMP3-201ENST00000265598 NUTM2BA6NNL0 878 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms