RNA–Protein interactions for RNA: ENST00000263946.7

PKP1-201, Transcript of plakophilin 1, humanhuman

TSL 5 BASIC

Gene PKP1, Length 5,447 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP1-201ENST00000263946 MEIS3Q99687 375 aa13.71□□□□□ -0.21
PKP1-201ENST00000263946 FLT4P35916 1363 aa13.71□□□□□ -0.21
PKP1-201ENST00000263946 MAP3K19Q56UN5 1328 aa13.71□□□□□ -0.21
PKP1-201ENST00000263946 MRPL50Q8N5N7 158 aaKnown RBP13.71□□□□□ -0.21
PKP1-201ENST00000263946 ERCC4Q92889 916 aaPredicted RBP13.71□□□□□ -0.21
PKP1-201ENST00000263946 CAVIN1Q6NZI2 390 aaKnown RBP13.71□□□□□ -0.21
PKP1-201ENST00000263946 CCDC85AQ96PX6 553 aaPredicted RBP13.71□□□□□ -0.21
PKP1-201ENST00000263946 ERICH2A1L162 156 aa13.71□□□□□ -0.22
PKP1-201ENST00000263946 CCDC173Q0VFZ6 552 aa13.71□□□□□ -0.22
PKP1-201ENST00000263946 KRT24Q2M2I5 525 aa13.71□□□□□ -0.22
PKP1-201ENST00000263946 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.71□□□□□ -0.22
PKP1-201ENST00000263946 HYPKQ9NX55 129 aa13.71□□□□□ -0.22
PKP1-201ENST00000263946 ZFYVE9O95405 1425 aa13.71□□□□□ -0.22
PKP1-201ENST00000263946 PDCP20941 246 aa13.7□□□□□ -0.22
PKP1-201ENST00000263946 MTERF4Q7Z6M4 381 aaKnown RBP13.7□□□□□ -0.22
PKP1-201ENST00000263946 HOMER1Q86YM7 354 aa13.7□□□□□ -0.22
PKP1-201ENST00000263946 AMOTL1Q8IY63 956 aa13.7□□□□□ -0.22
PKP1-201ENST00000263946 EYA1Q99502 592 aa13.7□□□□□ -0.22
PKP1-201ENST00000263946 MYD88Q99836 296 aa13.7□□□□□ -0.22
PKP1-201ENST00000263946 MYO6Q9UM54 1294 aa13.7□□□□□ -0.22
PKP1-201ENST00000263946 IFNL2Q8IZJ0 200 aa13.7□□□□□ -0.22
PKP1-201ENST00000263946 MRE11P49959 708 aa13.7□□□□□ -0.22
PKP1-201ENST00000263946 TTC39AQ5SRH9 613 aa13.7□□□□□ -0.22
PKP1-201ENST00000263946 CIZ1Q9ULV3 898 aaPredicted RBP13.7□□□□□ -0.22
PKP1-201ENST00000263946 UPF3BQ9BZI7 483 aaKnown RBP13.69□□□□□ -0.22
PKP1-201ENST00000263946 STARD3NLO95772 234 aa13.69□□□□□ -0.22
PKP1-201ENST00000263946 MCM4P33991 863 aa13.69□□□□□ -0.22
PKP1-201ENST00000263946 ZNF592Q92610 1267 aa13.69□□□□□ -0.22
PKP1-201ENST00000263946 FBXO3Q9UK99 471 aa13.69□□□□□ -0.22
PKP1-201ENST00000263946 CNKSR2Q8WXI2 1034 aa13.69□□□□□ -0.22
PKP1-201ENST00000263946 SBNO2Q9Y2G9 1366 aa13.69□□□□□ -0.22
PKP1-201ENST00000263946 MBD3O95983 291 aa13.69□□□□□ -0.22
PKP1-201ENST00000263946 FKBP4Q02790 459 aaKnown RBP eCLIP13.69□□□□□ -0.22
PKP1-201ENST00000263946 FMNL2Q96PY5 1086 aa13.69□□□□□ -0.22
PKP1-201ENST00000263946 TBC1D2Q9BYX2 928 aa13.69□□□□□ -0.22
PKP1-201ENST00000263946 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.69□□□□□ -0.22
PKP1-201ENST00000263946 TMOD3Q9NYL9 352 aa13.69□□□□□ -0.22
PKP1-201ENST00000263946 ZRSR2Q15696 482 aaKnown RBP13.69□□□□□ -0.22
PKP1-201ENST00000263946 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.68□□□□□ -0.22
PKP1-201ENST00000263946 NUCB1Q02818 461 aa13.68□□□□□ -0.22
PKP1-201ENST00000263946 TBC1D9Q6ZT07 1266 aa13.68□□□□□ -0.22
PKP1-201ENST00000263946 PLA2R1Q13018 1463 aa13.68□□□□□ -0.22
PKP1-201ENST00000263946 PIK3R4Q99570 1358 aa13.68□□□□□ -0.22
PKP1-201ENST00000263946 FIBPO43427 364 aa13.68□□□□□ -0.22
PKP1-201ENST00000263946 BLOC1S2Q6QNY1 142 aa13.68□□□□□ -0.22
PKP1-201ENST00000263946 RNF214Q8ND24 703 aa13.68□□□□□ -0.22
PKP1-201ENST00000263946 MNS1Q8NEH6 495 aa13.68□□□□□ -0.22
PKP1-201ENST00000263946 MPHOSPH8Q99549 860 aa13.68□□□□□ -0.22
PKP1-201ENST00000263946 MAP3K2Q9Y2U5 619 aa13.68□□□□□ -0.22
PKP1-201ENST00000263946 H0YHG0 523 aa13.67□□□□□ -0.22
PKP1-201ENST00000263946 PPP1R42Q7Z4L9 355 aa13.67□□□□□ -0.22
PKP1-201ENST00000263946 IL13P35225 146 aa13.67□□□□□ -0.22
PKP1-201ENST00000263946 ODF2Q5BJF6 829 aa13.67□□□□□ -0.22
PKP1-201ENST00000263946 CCDC73Q6ZRK6 1079 aa13.67□□□□□ -0.22
PKP1-201ENST00000263946 LRRC59Q96AG4 307 aaKnown RBP13.67□□□□□ -0.22
PKP1-201ENST00000263946 JAKMIP1Q96N16 626 aaKnown RBP13.67□□□□□ -0.22
PKP1-201ENST00000263946 BOLA2Q9H3K6 86 aa13.67□□□□□ -0.22
PKP1-201ENST00000263946 PIP4K2BP78356 416 aa13.67□□□□□ -0.22
PKP1-201ENST00000263946 CT47A1Q5JQC4 288 aaPredicted RBP13.66□□□□□ -0.22
PKP1-201ENST00000263946 ERCC6L2Q5T890 1561 aa13.66□□□□□ -0.22
PKP1-201ENST00000263946 CTDP1Q9Y5B0 961 aaPredicted RBP13.66□□□□□ -0.22
PKP1-201ENST00000263946 RNF123Q5XPI4 1314 aa13.66□□□□□ -0.22
PKP1-201ENST00000263946 A0A087WZG4 1122 aa13.66□□□□□ -0.22
PKP1-201ENST00000263946 CCDC66A2RUB6 948 aa13.66□□□□□ -0.22
PKP1-201ENST00000263946 TBC1D32Q96NH3 1257 aa13.66□□□□□ -0.22
PKP1-201ENST00000263946 TRIM35Q9UPQ4 493 aa13.66□□□□□ -0.22
PKP1-201ENST00000263946 MAGI2Q86UL8 1455 aa13.66□□□□□ -0.22
PKP1-201ENST00000263946 GCP02774 474 aa13.66□□□□□ -0.22
PKP1-201ENST00000263946 NASPP49321 788 aaPredicted RBP13.66□□□□□ -0.22
PKP1-201ENST00000263946 SAFBQ15424 915 aaKnown RBP eCLIP13.66□□□□□ -0.22
PKP1-201ENST00000263946 ANKRD44Q8N8A2 993 aa13.66□□□□□ -0.22
PKP1-201ENST00000263946 CCDC8Q9H0W5 538 aaPredicted RBP13.66□□□□□ -0.22
PKP1-201ENST00000263946 ZBTB40Q9NUA8 1239 aa13.66□□□□□ -0.22
PKP1-201ENST00000263946 EDC4Q6P2E9 1401 aaKnown RBP13.66□□□□□ -0.22
PKP1-201ENST00000263946 STK3Q13188 491 aa13.66□□□□□ -0.22
PKP1-201ENST00000263946 C19orf44Q9H6X5 657 aa13.66□□□□□ -0.22
PKP1-201ENST00000263946 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.65□□□□□ -0.22
PKP1-201ENST00000263946 CHPF2Q9P2E5 772 aa13.65□□□□□ -0.22
PKP1-201ENST00000263946 NPHP3Q7Z494 1330 aa13.65□□□□□ -0.22
PKP1-201ENST00000263946 ANKRD1Q15327 319 aa13.65□□□□□ -0.22
PKP1-201ENST00000263946 TSHZ3Q63HK5 1081 aa13.65□□□□□ -0.22
PKP1-201ENST00000263946 INSRP06213 1382 aa13.65□□□□□ -0.22
PKP1-201ENST00000263946 WDR33Q9C0J8 1336 aaKnown RBP13.65□□□□□ -0.22
PKP1-201ENST00000263946 PREX2Q70Z35 1606 aa13.65□□□□□ -0.22
PKP1-201ENST00000263946 SASS6Q6UVJ0 657 aa13.64□□□□□ -0.23
PKP1-201ENST00000263946 LTKP29376 864 aa13.64□□□□□ -0.23
PKP1-201ENST00000263946 C8orf34Q49A92 452 aa13.64□□□□□ -0.23
PKP1-201ENST00000263946 FBXW7Q969H0 707 aa13.64□□□□□ -0.23
PKP1-201ENST00000263946 PDRG1Q9NUG6 133 aa13.64□□□□□ -0.23
PKP1-201ENST00000263946 TRPM2O94759 1503 aa13.64□□□□□ -0.23
PKP1-201ENST00000263946 TMEM2Q9UHN6 1383 aa13.64□□□□□ -0.23
PKP1-201ENST00000263946 HOXC9P31274 260 aa13.64□□□□□ -0.23
PKP1-201ENST00000263946 AKAP4Q5JQC9 854 aa13.64□□□□□ -0.23
PKP1-201ENST00000263946 UGGT1Q9NYU2 1555 aa13.64□□□□□ -0.23
PKP1-201ENST00000263946 BLMP54132 1417 aaPredicted RBP13.64□□□□□ -0.23
PKP1-201ENST00000263946 ADAMTS2O95450 1211 aa13.64□□□□□ -0.23
PKP1-201ENST00000263946 SART3Q15020 963 aaKnown RBP13.64□□□□□ -0.23
PKP1-201ENST00000263946 ZBTB3Q9H5J0 574 aa13.64□□□□□ -0.23
PKP1-201ENST00000263946 MLH3Q9UHC1 1453 aa13.64□□□□□ -0.23
PKP1-201ENST00000263946 SLC39A6Q13433 755 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms