RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 PRDM10Q9NQV6 1147 aa14.92□□□□□ -0.02
CHMP2B-201ENST00000263780 EMILIN1Q9Y6C2 1016 aa14.92□□□□□ -0.02
CHMP2B-201ENST00000263780 PLEKHG5O94827 1062 aa14.92□□□□□ -0.02
CHMP2B-201ENST00000263780 CHMLP26374 656 aa14.92□□□□□ -0.02
CHMP2B-201ENST00000263780 LRRCC1Q9C099 1032 aa14.92□□□□□ -0.02
CHMP2B-201ENST00000263780 PODXL2Q9NZ53 605 aa14.92□□□□□ -0.02
CHMP2B-201ENST00000263780 EDC4Q6P2E9 1401 aaKnown RBP14.92□□□□□ -0.02
CHMP2B-201ENST00000263780 GNAI2P04899 355 aa14.91□□□□□ -0.02
CHMP2B-201ENST00000263780 PPP4R3BQ5MIZ7 849 aa14.91□□□□□ -0.02
CHMP2B-201ENST00000263780 TTC12Q9H892 705 aaPredicted RBP14.91□□□□□ -0.02
CHMP2B-201ENST00000263780 FAM83GA6ND36 823 aa14.9□□□□□ -0.02
CHMP2B-201ENST00000263780 PDCL2Q8N4E4 241 aa14.9□□□□□ -0.02
CHMP2B-201ENST00000263780 ZNF830Q96NB3 372 aaPredicted RBP14.9□□□□□ -0.02
CHMP2B-201ENST00000263780 AOX1Q06278 1338 aa14.9□□□□□ -0.02
CHMP2B-201ENST00000263780 ZSCAN22P10073 491 aaPredicted RBP14.9□□□□□ -0.02
CHMP2B-201ENST00000263780 COG3Q96JB2 828 aa14.9□□□□□ -0.02
CHMP2B-201ENST00000263780 STAP2Q9UGK3 403 aa14.9□□□□□ -0.02
CHMP2B-201ENST00000263780 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.9□□□□□ -0.02
CHMP2B-201ENST00000263780 SALL3Q9BXA9 1300 aa14.89□□□□□ -0.03
CHMP2B-201ENST00000263780 MAP2P11137 1827 aaKnown RBP14.89□□□□□ -0.03
CHMP2B-201ENST00000263780 TRIM6-TRIM34B2RNG4 842 aa14.89□□□□□ -0.03
CHMP2B-201ENST00000263780 FBLN1P23142 703 aa14.89□□□□□ -0.03
CHMP2B-201ENST00000263780 CBX1P83916 185 aa14.89□□□□□ -0.03
CHMP2B-201ENST00000263780 DCTN1Q14203 1278 aa14.89□□□□□ -0.03
CHMP2B-201ENST00000263780 KIAA1524Q8TCG1 905 aa14.89□□□□□ -0.03
CHMP2B-201ENST00000263780 BCL2L12Q9HB09 334 aa14.89□□□□□ -0.03
CHMP2B-201ENST00000263780 GDPD2Q9HCC8 539 aa14.89□□□□□ -0.03
CHMP2B-201ENST00000263780 PALD1Q9ULE6 856 aa14.89□□□□□ -0.03
CHMP2B-201ENST00000263780 RPAP1Q9BWH6 1393 aaPredicted RBP14.89□□□□□ -0.03
CHMP2B-201ENST00000263780 SIGLEC1Q9BZZ2 1709 aa14.88□□□□□ -0.03
CHMP2B-201ENST00000263780 SLC4A2P04920 1241 aa14.88□□□□□ -0.03
CHMP2B-201ENST00000263780 HCLS1P14317 486 aaPredicted RBP14.88□□□□□ -0.03
CHMP2B-201ENST00000263780 NOL8Q76FK4 1167 aaKnown RBP14.88□□□□□ -0.03
CHMP2B-201ENST00000263780 RILPL2Q969X0 211 aa14.88□□□□□ -0.03
CHMP2B-201ENST00000263780 FEZ1Q99689 392 aa14.88□□□□□ -0.03
CHMP2B-201ENST00000263780 ZHX1Q9UKY1 873 aaPredicted RBP14.88□□□□□ -0.03
CHMP2B-201ENST00000263780 GNAI3P08754 354 aa14.88□□□□□ -0.03
CHMP2B-201ENST00000263780 HSPA4P34932 840 aa14.87□□□□□ -0.03
CHMP2B-201ENST00000263780 PDIA4P13667 645 aaKnown RBP14.86□□□□□ -0.03
CHMP2B-201ENST00000263780 FOXD4L6Q3SYB3 417 aaPredicted RBP14.86□□□□□ -0.03
CHMP2B-201ENST00000263780 FOXD4L3Q6VB84 417 aaPredicted RBP14.86□□□□□ -0.03
CHMP2B-201ENST00000263780 DLC1Q96QB1 1528 aa14.86□□□□□ -0.03
CHMP2B-201ENST00000263780 DLG5Q8TDM6 1919 aa14.86□□□□□ -0.03
CHMP2B-201ENST00000263780 STX6O43752 255 aa14.86□□□□□ -0.03
CHMP2B-201ENST00000263780 SYCP1Q15431 976 aa14.86□□□□□ -0.03
CHMP2B-201ENST00000263780 KRT24Q2M2I5 525 aa14.86□□□□□ -0.03
CHMP2B-201ENST00000263780 TAF3Q5VWG9 929 aa14.86□□□□□ -0.03
CHMP2B-201ENST00000263780 ANKRD7Q92527 254 aa14.86□□□□□ -0.03
CHMP2B-201ENST00000263780 UPF3BQ9BZI7 483 aaKnown RBP14.86□□□□□ -0.03
CHMP2B-201ENST00000263780 CNPY2Q9Y2B0 182 aa14.85□□□□□ -0.03
CHMP2B-201ENST00000263780 CTIFO43310 598 aaKnown RBP14.85□□□□□ -0.03
CHMP2B-201ENST00000263780 CCDC192P0DO97 292 aa14.85□□□□□ -0.03
CHMP2B-201ENST00000263780 ATP8B2P98198 1209 aa14.85□□□□□ -0.03
CHMP2B-201ENST00000263780 SLC4A10Q6U841 1118 aa14.85□□□□□ -0.03
CHMP2B-201ENST00000263780 LIMCH1Q9UPQ0 1083 aa14.85□□□□□ -0.03
CHMP2B-201ENST00000263780 SMC3Q9UQE7 1217 aa14.85□□□□□ -0.03
CHMP2B-201ENST00000263780 EXOC6BQ9Y2D4 811 aa14.85□□□□□ -0.03
CHMP2B-201ENST00000263780 ARHGEF10O15013 1369 aa14.85□□□□□ -0.03
CHMP2B-201ENST00000263780 ALKQ9UM73 1620 aa14.84□□□□□ -0.03
CHMP2B-201ENST00000263780 ZBTB7CA1YPR0 619 aa14.84□□□□□ -0.03
CHMP2B-201ENST00000263780 F13A1P00488 732 aa14.84□□□□□ -0.03
CHMP2B-201ENST00000263780 PLCB2Q00722 1185 aa14.84□□□□□ -0.03
CHMP2B-201ENST00000263780 NME9Q86XW9 330 aa14.84□□□□□ -0.03
CHMP2B-201ENST00000263780 AEBP1Q8IUX7 1158 aa14.84□□□□□ -0.03
CHMP2B-201ENST00000263780 MPNDQ8N594 471 aa14.84□□□□□ -0.03
CHMP2B-201ENST00000263780 TSC1Q92574 1164 aa14.84□□□□□ -0.03
CHMP2B-201ENST00000263780 FUCA2Q9BTY2 467 aa14.84□□□□□ -0.03
CHMP2B-201ENST00000263780 RIOK3O14730 519 aaKnown RBP14.83□□□□□ -0.03
CHMP2B-201ENST00000263780 ATP2B3Q16720 1220 aa14.83□□□□□ -0.03
CHMP2B-201ENST00000263780 C17orf53Q8N3J3 647 aaPredicted RBP14.83□□□□□ -0.03
CHMP2B-201ENST00000263780 SYT1P21579 422 aa14.83□□□□□ -0.04
CHMP2B-201ENST00000263780 TMEM131LA2VDJ0 1609 aa14.83□□□□□ -0.04
CHMP2B-201ENST00000263780 RTF1Q92541 710 aaKnown RBP14.82□□□□□ -0.04
CHMP2B-201ENST00000263780 STK31Q9BXU1 1019 aa14.82□□□□□ -0.04
CHMP2B-201ENST00000263780 OGFRQ9NZT2 677 aa14.82□□□□□ -0.04
CHMP2B-201ENST00000263780 NPM1P06748 294 aaKnown RBP eCLIP14.82□□□□□ -0.04
CHMP2B-201ENST00000263780 SULT6B1Q6IMI4 303 aa14.82□□□□□ -0.04
CHMP2B-201ENST00000263780 JARID2Q92833 1246 aaPredicted RBP14.81□□□□□ -0.04
CHMP2B-201ENST00000263780 ZSCAN31Q96LW9 406 aaPredicted RBP14.81□□□□□ -0.04
CHMP2B-201ENST00000263780 RAB11FIP3O75154 756 aa14.81□□□□□ -0.04
CHMP2B-201ENST00000263780 RRS1Q15050 365 aaKnown RBP14.81□□□□□ -0.04
CHMP2B-201ENST00000263780 TSHZ3Q63HK5 1081 aa14.81□□□□□ -0.04
CHMP2B-201ENST00000263780 GIMAP6Q6P9H5 292 aa14.81□□□□□ -0.04
CHMP2B-201ENST00000263780 RAD50Q92878 1312 aa14.81□□□□□ -0.04
CHMP2B-201ENST00000263780 FIBPO43427 364 aa14.8□□□□□ -0.04
CHMP2B-201ENST00000263780 MCM10Q7L590 875 aa14.8□□□□□ -0.04
CHMP2B-201ENST00000263780 TTC14Q96N46 770 aa14.8□□□□□ -0.04
CHMP2B-201ENST00000263780 PYCARDQ9ULZ3 195 aa14.8□□□□□ -0.04
CHMP2B-201ENST00000263780 WASLO00401 505 aaPredicted RBP14.8□□□□□ -0.04
CHMP2B-201ENST00000263780 FAM200AQ8TCP9 573 aa14.8□□□□□ -0.04
CHMP2B-201ENST00000263780 KCNF1Q9H3M0 494 aa14.8□□□□□ -0.04
CHMP2B-201ENST00000263780 SH2B1Q9NRF2 756 aaPredicted RBP14.8□□□□□ -0.04
CHMP2B-201ENST00000263780 SNX14Q9Y5W7 946 aa14.8□□□□□ -0.04
CHMP2B-201ENST00000263780 SMTNL1A8MU46 457 aa14.79□□□□□ -0.04
CHMP2B-201ENST00000263780 EIF4A2Q14240 407 aaKnown RBP14.79□□□□□ -0.04
CHMP2B-201ENST00000263780 SENP3Q9H4L4 574 aaPredicted RBP14.79□□□□□ -0.04
CHMP2B-201ENST00000263780 STAG3Q9UJ98 1225 aa14.79□□□□□ -0.04
CHMP2B-201ENST00000263780 PAXBP1Q9Y5B6 917 aa14.79□□□□□ -0.04
CHMP2B-201ENST00000263780 CRB1P82279 1406 aa14.79□□□□□ -0.04
CHMP2B-201ENST00000263780 F6X3S4 739 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms