RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 THUMPD2Q9BTF0 503 aaKnown RBP24.22■■□□□ 1.47
SDF4-201ENST00000263741 CABP4P57796 275 aa24.21■■□□□ 1.47
SDF4-201ENST00000263741 CCDC125Q86Z20 511 aa24.2■■□□□ 1.47
SDF4-201ENST00000263741 NFATC2IPQ8NCF5 419 aa24.2■■□□□ 1.47
SDF4-201ENST00000263741 NUP188Q5SRE5 1749 aa24.2■■□□□ 1.46
SDF4-201ENST00000263741 ERVV-2B6SEH9 535 aa24.2■■□□□ 1.46
SDF4-201ENST00000263741 BAG6P46379 1132 aa24.2■■□□□ 1.46
SDF4-201ENST00000263741 RIPK4P57078 832 aa24.2■■□□□ 1.46
SDF4-201ENST00000263741 CEMIPQ8WUJ3 1361 aa24.19■■□□□ 1.46
SDF4-201ENST00000263741 EZH2Q15910 746 aaKnown RBP24.19■■□□□ 1.46
SDF4-201ENST00000263741 RTF1Q92541 710 aaKnown RBP24.19■■□□□ 1.46
SDF4-201ENST00000263741 SLC52A2Q9HAB3 445 aa24.18■■□□□ 1.46
SDF4-201ENST00000263741 ASAP1Q9ULH1 1129 aa24.17■■□□□ 1.46
SDF4-201ENST00000263741 UBR2Q8IWV8 1755 aa24.16■■□□□ 1.46
SDF4-201ENST00000263741 PALLDQ8WX93 1383 aa24.15■■□□□ 1.46
SDF4-201ENST00000263741 KCNQ4P56696 695 aa24.15■■□□□ 1.46
SDF4-201ENST00000263741 TEFQ10587 303 aa24.15■■□□□ 1.46
SDF4-201ENST00000263741 TAF1LQ8IZX4 1826 aa24.15■■□□□ 1.46
SDF4-201ENST00000263741 CAMKK2Q96RR4 588 aa24.14■■□□□ 1.46
SDF4-201ENST00000263741 ATG3Q9NT62 314 aa24.14■■□□□ 1.45
SDF4-201ENST00000263741 TRIM35Q9UPQ4 493 aa24.14■■□□□ 1.45
SDF4-201ENST00000263741 KDM3BQ7LBC6 1761 aa24.13■■□□□ 1.45
SDF4-201ENST00000263741 SLC39A6Q13433 755 aa24.13■■□□□ 1.45
SDF4-201ENST00000263741 SALL2Q9Y467 1007 aaPredicted RBP24.13■■□□□ 1.45
SDF4-201ENST00000263741 C5P01031 1676 aa24.13■■□□□ 1.45
SDF4-201ENST00000263741 HTATSF1O43719 755 aaKnown RBP24.12■■□□□ 1.45
SDF4-201ENST00000263741 PROM2Q8N271 834 aa24.12■■□□□ 1.45
SDF4-201ENST00000263741 PLSCR1O15162 318 aa24.11■■□□□ 1.45
SDF4-201ENST00000263741 TXNRD1Q16881 649 aa24.11■■□□□ 1.45
SDF4-201ENST00000263741 KCPQ6ZWJ8 1503 aa24.1■■□□□ 1.45
SDF4-201ENST00000263741 TJP1Q07157 1748 aa24.1■■□□□ 1.45
SDF4-201ENST00000263741 MIS18AQ9NYP9 233 aa24.09■■□□□ 1.45
SDF4-201ENST00000263741 LMOD3Q0VAK6 560 aa24.08■■□□□ 1.45
SDF4-201ENST00000263741 LRRC4BQ9NT99 713 aa24.08■■□□□ 1.45
SDF4-201ENST00000263741 PTCD1O75127 700 aaKnown RBP24.07■■□□□ 1.44
SDF4-201ENST00000263741 COL5A3P25940 1745 aaPredicted RBP24.07■■□□□ 1.44
SDF4-201ENST00000263741 KCNQ3O43525 872 aa24.07■■□□□ 1.44
SDF4-201ENST00000263741 TUBGCP6Q96RT7 1819 aa24.07■■□□□ 1.44
SDF4-201ENST00000263741 SMARCC1Q92922 1105 aaPredicted RBP24.06■■□□□ 1.44
SDF4-201ENST00000263741 RBM42Q9BTD8 480 aaKnown RBP24.06■■□□□ 1.44
SDF4-201ENST00000263741 CCNL1Q9UK58 526 aaPredicted RBP24.06■■□□□ 1.44
SDF4-201ENST00000263741 BTBD11A6QL63 1104 aa24.06■■□□□ 1.44
SDF4-201ENST00000263741 SLC4A9Q96Q91 983 aa24.05■■□□□ 1.44
SDF4-201ENST00000263741 ZNF831Q5JPB2 1677 aa24.04■■□□□ 1.44
SDF4-201ENST00000263741 LOC102724428A0A0B4J2F2 783 aa24.04■■□□□ 1.44
SDF4-201ENST00000263741 SIK1P57059 783 aa24.04■■□□□ 1.44
SDF4-201ENST00000263741 C4BP0C0L5 1744 aa24.03■■□□□ 1.44
SDF4-201ENST00000263741 TAF7Q15545 349 aaPredicted RBP24.03■■□□□ 1.44
SDF4-201ENST00000263741 ZNF790Q6PG37 636 aa24.03■■□□□ 1.44
SDF4-201ENST00000263741 LAS1LQ9Y4W2 734 aaKnown RBP24.03■■□□□ 1.44
SDF4-201ENST00000263741 TTC5Q8N0Z6 440 aa24.02■■□□□ 1.44
SDF4-201ENST00000263741 ANO8Q9HCE9 1232 aaPredicted RBP24.02■■□□□ 1.44
SDF4-201ENST00000263741 CICQ96RK0 1608 aaPredicted RBP24.02■■□□□ 1.44
SDF4-201ENST00000263741 ITPK1Q13572 414 aa24.01■■□□□ 1.43
SDF4-201ENST00000263741 MYH14Q7Z406 1995 aaKnown RBP24.01■■□□□ 1.43
SDF4-201ENST00000263741 ATP6V1AP38606 617 aa24■■□□□ 1.43
SDF4-201ENST00000263741 WWC1Q8IX03 1113 aa24■■□□□ 1.43
SDF4-201ENST00000263741 ZNF496Q96IT1 587 aaPredicted RBP24■■□□□ 1.43
SDF4-201ENST00000263741 SLC27A3Q5K4L6 730 aa23.99■■□□□ 1.43
SDF4-201ENST00000263741 GTF3C3Q9Y5Q9 886 aa23.99■■□□□ 1.43
SDF4-201ENST00000263741 TSPYL4Q9UJ04 414 aa23.98■■□□□ 1.43
SDF4-201ENST00000263741 LAMB4A4D0S4 1761 aa23.98■■□□□ 1.43
SDF4-201ENST00000263741 LINC00116Q8NCU8 138 aa23.98■■□□□ 1.43
SDF4-201ENST00000263741 UBR3Q6ZT12 1888 aa23.98■■□□□ 1.43
SDF4-201ENST00000263741 ZNF827Q17R98 1081 aa23.97■■□□□ 1.43
SDF4-201ENST00000263741 CCDC27Q2M243 656 aa23.96■■□□□ 1.43
SDF4-201ENST00000263741 HEG1Q9ULI3 1381 aa23.95■■□□□ 1.43
SDF4-201ENST00000263741 PRAMEF22A3QJZ6 481 aa23.95■■□□□ 1.42
SDF4-201ENST00000263741 DNAJC10Q8IXB1 793 aa23.95■■□□□ 1.42
SDF4-201ENST00000263741 PSDA5PKW4 1024 aaPredicted RBP23.93■■□□□ 1.42
SDF4-201ENST00000263741 FMNL2Q96PY5 1086 aa23.93■■□□□ 1.42
SDF4-201ENST00000263741 CHL1O00533 1208 aa23.92■■□□□ 1.42
SDF4-201ENST00000263741 QSER1Q2KHR3 1735 aa23.92■■□□□ 1.42
SDF4-201ENST00000263741 KRT24Q2M2I5 525 aa23.92■■□□□ 1.42
SDF4-201ENST00000263741 SMIM5Q71RC9 77 aa23.92■■□□□ 1.42
SDF4-201ENST00000263741 MBIPQ9NS73 344 aa23.92■■□□□ 1.42
SDF4-201ENST00000263741 R3HDM1Q15032 1099 aaKnown RBP23.91■■□□□ 1.42
SDF4-201ENST00000263741 TSR2Q969E8 191 aaKnown RBP23.91■■□□□ 1.42
SDF4-201ENST00000263741 CFAP44Q96MT7 982 aa23.91■■□□□ 1.42
SDF4-201ENST00000263741 EIF4A1P60842 406 aaKnown RBP23.91■■□□□ 1.42
SDF4-201ENST00000263741 IFT57Q9NWB7 429 aa23.91■■□□□ 1.42
SDF4-201ENST00000263741 ZNF853P0CG23 659 aa23.9■■□□□ 1.42
SDF4-201ENST00000263741 HNRNPUQ00839 825 aaKnown RBP eCLIP23.9■■□□□ 1.42
SDF4-201ENST00000263741 CALD1Q05682 793 aaKnown RBP23.9■■□□□ 1.42
SDF4-201ENST00000263741 AMIGO3Q86WK7 504 aa23.9■■□□□ 1.42
SDF4-201ENST00000263741 SPINK5Q9NQ38 1064 aaPredicted RBP23.9■■□□□ 1.42
SDF4-201ENST00000263741 ZNF521Q96K83 1311 aa23.9■■□□□ 1.42
SDF4-201ENST00000263741 AKT1S1Q96B36 256 aa23.9■■□□□ 1.42
SDF4-201ENST00000263741 STK32BQ9NY57 414 aa23.9■■□□□ 1.42
SDF4-201ENST00000263741 NBPF14Q5TI25 921 aa23.89■■□□□ 1.41
SDF4-201ENST00000263741 C4AP0C0L4 1744 aa23.89■■□□□ 1.41
SDF4-201ENST00000263741 GNAI1P63096 354 aa23.88■■□□□ 1.41
SDF4-201ENST00000263741 NCBP3Q53F19 620 aaKnown RBP23.88■■□□□ 1.41
SDF4-201ENST00000263741 CASZ1Q86V15 1759 aa23.88■■□□□ 1.41
SDF4-201ENST00000263741 SLC15A2Q16348 729 aa23.88■■□□□ 1.41
SDF4-201ENST00000263741 VSIG10Q8N0Z9 540 aa23.87■■□□□ 1.41
SDF4-201ENST00000263741 AK7Q96M32 723 aa23.87■■□□□ 1.41
SDF4-201ENST00000263741 PDGFDQ9GZP0 370 aaPredicted RBP23.87■■□□□ 1.41
SDF4-201ENST00000263741 CRKLP46109 303 aaKnown RBP23.87■■□□□ 1.41
SDF4-201ENST00000263741 GNPATO15228 680 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 125.9 ms