RNA–Protein interactions for RNA: ENST00000263102.6

CCDC6-201, Transcript of coiled-coil domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC6, Length 5,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-201ENST00000263102 UBE4AQ14139 1066 aa17.39■□□□□ 0.37
CCDC6-201ENST00000263102 ZNF397Q8NF99 534 aaPredicted RBP17.39■□□□□ 0.37
CCDC6-201ENST00000263102 MMRN2Q9H8L6 949 aa17.38■□□□□ 0.37
CCDC6-201ENST00000263102 GOLGA6L10A0A0M3HER8 536 aa17.38■□□□□ 0.37
CCDC6-201ENST00000263102 ST5P78524 1137 aa17.38■□□□□ 0.37
CCDC6-201ENST00000263102 SLF2Q8IX21 1173 aa17.38■□□□□ 0.37
CCDC6-201ENST00000263102 EXOC5O00471 708 aa17.38■□□□□ 0.37
CCDC6-201ENST00000263102 CBFA2T2O43439 604 aa17.38■□□□□ 0.37
CCDC6-201ENST00000263102 DYDC1Q8WWB3 177 aa17.38■□□□□ 0.37
CCDC6-201ENST00000263102 ZNF692Q9BU19 519 aaPredicted RBP17.38■□□□□ 0.37
CCDC6-201ENST00000263102 SLC5A1P13866 664 aa17.38■□□□□ 0.37
CCDC6-201ENST00000263102 AEBP1Q8IUX7 1158 aa17.38■□□□□ 0.37
CCDC6-201ENST00000263102 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.38■□□□□ 0.37
CCDC6-201ENST00000263102 RSPH6AQ9H0K4 717 aa17.38■□□□□ 0.37
CCDC6-201ENST00000263102 NF2P35240 595 aa17.37■□□□□ 0.37
CCDC6-201ENST00000263102 NAPBQ9H115 298 aa17.37■□□□□ 0.37
CCDC6-201ENST00000263102 CEP131Q9UPN4 1083 aa17.37■□□□□ 0.37
CCDC6-201ENST00000263102 POGZQ7Z3K3 1410 aa17.37■□□□□ 0.37
CCDC6-201ENST00000263102 KLHL10Q6JEL2 608 aa17.37■□□□□ 0.37
CCDC6-201ENST00000263102 SPATA32Q96LK8 384 aa17.37■□□□□ 0.37
CCDC6-201ENST00000263102 LMAN1P49257 510 aa17.37■□□□□ 0.37
CCDC6-201ENST00000263102 CBX1P83916 185 aa17.37■□□□□ 0.37
CCDC6-201ENST00000263102 CACNA2D4Q7Z3S7 1137 aa17.37■□□□□ 0.37
CCDC6-201ENST00000263102 ADAMTS8Q9UP79 889 aa17.37■□□□□ 0.37
CCDC6-201ENST00000263102 RRBP1Q9P2E9 1410 aaKnown RBP17.37■□□□□ 0.37
CCDC6-201ENST00000263102 TMEM266Q2M3C6 531 aa17.36■□□□□ 0.37
CCDC6-201ENST00000263102 AKAP2Q9Y2D5 859 aa17.36■□□□□ 0.37
CCDC6-201ENST00000263102 HOOK3Q86VS8 718 aa17.36■□□□□ 0.37
CCDC6-201ENST00000263102 TSHZ2Q9NRE2 1034 aa17.36■□□□□ 0.37
CCDC6-201ENST00000263102 TAF12Q16514 161 aa17.36■□□□□ 0.37
CCDC6-201ENST00000263102 UBAP1LF5GYI3 381 aa17.35■□□□□ 0.37
CCDC6-201ENST00000263102 CTCFLQ8NI51 663 aaPredicted RBP17.35■□□□□ 0.37
CCDC6-201ENST00000263102 DDX46Q7L014 1031 aaKnown RBP17.35■□□□□ 0.37
CCDC6-201ENST00000263102 SYCP3Q8IZU3 236 aa17.34■□□□□ 0.37
CCDC6-201ENST00000263102 BAG4O95429 457 aaKnown RBP17.34■□□□□ 0.37
CCDC6-201ENST00000263102 ATF7IPQ6VMQ6 1270 aa17.34■□□□□ 0.37
CCDC6-201ENST00000263102 MAP2K1Q02750 393 aaPredicted RBP17.34■□□□□ 0.37
CCDC6-201ENST00000263102 IFIT5Q13325 482 aaKnown RBP17.34■□□□□ 0.37
CCDC6-201ENST00000263102 IQCEQ6IPM2 695 aa17.34■□□□□ 0.37
CCDC6-201ENST00000263102 OTUD6BQ8N6M0 293 aa17.34■□□□□ 0.37
CCDC6-201ENST00000263102 CEP63Q96MT8 703 aa17.34■□□□□ 0.37
CCDC6-201ENST00000263102 POLD1P28340 1107 aa17.34■□□□□ 0.37
CCDC6-201ENST00000263102 GNAT3A8MTJ3 354 aa17.34■□□□□ 0.37
CCDC6-201ENST00000263102 RAPGEF3O95398 923 aa17.34■□□□□ 0.37
CCDC6-201ENST00000263102 NLRP5P59047 1200 aa17.34■□□□□ 0.37
CCDC6-201ENST00000263102 ACSBG1Q96GR2 724 aa17.34■□□□□ 0.37
CCDC6-201ENST00000263102 PDZRN3Q9UPQ7 1066 aa17.34■□□□□ 0.37
CCDC6-201ENST00000263102 CCDC192P0DO97 292 aa17.33■□□□□ 0.37
CCDC6-201ENST00000263102 FKBP15Q5T1M5 1219 aa17.33■□□□□ 0.36
CCDC6-201ENST00000263102 DPH6Q7L8W6 267 aa17.33■□□□□ 0.36
CCDC6-201ENST00000263102 ZNF408Q9H9D4 720 aa17.33■□□□□ 0.36
CCDC6-201ENST00000263102 SERPINA10Q9UK55 444 aa17.33■□□□□ 0.36
CCDC6-201ENST00000263102 FANCD2Q9BXW9 1451 aa17.33■□□□□ 0.36
CCDC6-201ENST00000263102 MAP3K12Q12852 859 aa17.33■□□□□ 0.36
CCDC6-201ENST00000263102 SMC1AQ14683 1233 aaKnown RBP17.33■□□□□ 0.36
CCDC6-201ENST00000263102 SLC12A5Q9H2X9 1139 aa17.33■□□□□ 0.36
CCDC6-201ENST00000263102 ZBED9Q6R2W3 1325 aa17.33■□□□□ 0.36
CCDC6-201ENST00000263102 HLA-DOAP06340 250 aa17.32■□□□□ 0.36
CCDC6-201ENST00000263102 KRT85P78386 507 aa17.32■□□□□ 0.36
CCDC6-201ENST00000263102 DDX23Q9BUQ8 820 aaKnown RBP17.32■□□□□ 0.36
CCDC6-201ENST00000263102 SPA17Q15506 151 aa17.32■□□□□ 0.36
CCDC6-201ENST00000263102 TCERG1LQ5VWI1 586 aa17.32■□□□□ 0.36
CCDC6-201ENST00000263102 C8orf37Q96NL8 207 aa17.32■□□□□ 0.36
CCDC6-201ENST00000263102 VEZTQ9HBM0 779 aa17.32■□□□□ 0.36
CCDC6-201ENST00000263102 ANKRD18BA2A2Z9 1011 aa17.32■□□□□ 0.36
CCDC6-201ENST00000263102 INCENPQ9NQS7 918 aa17.32■□□□□ 0.36
CCDC6-201ENST00000263102 FYCO1Q9BQS8 1478 aa17.32■□□□□ 0.36
CCDC6-201ENST00000263102 PRC1O43663 620 aa17.32■□□□□ 0.36
CCDC6-201ENST00000263102 MCM2P49736 904 aa17.31■□□□□ 0.36
CCDC6-201ENST00000263102 BEGAINQ9BUH8 593 aa17.31■□□□□ 0.36
CCDC6-201ENST00000263102 UTP14AQ9BVJ6 771 aaKnown RBP17.31■□□□□ 0.36
CCDC6-201ENST00000263102 EP400NLQ6ZTU2 488 aa17.31■□□□□ 0.36
CCDC6-201ENST00000263102 SYNCQ9H7C4 482 aa17.31■□□□□ 0.36
CCDC6-201ENST00000263102 CCDC102AQ96A19 550 aa17.31■□□□□ 0.36
CCDC6-201ENST00000263102 GCC1Q96CN9 775 aa17.31■□□□□ 0.36
CCDC6-201ENST00000263102 ZBTB3Q9H5J0 574 aa17.31■□□□□ 0.36
CCDC6-201ENST00000263102 CCDC144CPQ8IYA2 1237 aa17.31■□□□□ 0.36
CCDC6-201ENST00000263102 UPF3BQ9BZI7 483 aaKnown RBP17.31■□□□□ 0.36
CCDC6-201ENST00000263102 CASTP20810 708 aaKnown RBP17.3■□□□□ 0.36
CCDC6-201ENST00000263102 GUCY1B3Q02153 619 aa17.3■□□□□ 0.36
CCDC6-201ENST00000263102 HDAC9Q9UKV0 1011 aa17.3■□□□□ 0.36
CCDC6-201ENST00000263102 CCDC194A0A1B0GVG4 234 aa17.3■□□□□ 0.36
CCDC6-201ENST00000263102 CAMK4Q16566 473 aa17.3■□□□□ 0.36
CCDC6-201ENST00000263102 KCNH5Q8NCM2 988 aa17.3■□□□□ 0.36
CCDC6-201ENST00000263102 TSNARE1Q96NA8 513 aa17.3■□□□□ 0.36
CCDC6-201ENST00000263102 BOLA2Q9H3K6 86 aa17.3■□□□□ 0.36
CCDC6-201ENST00000263102 BCCIPQ9P287 314 aaKnown RBP eCLIP17.3■□□□□ 0.36
CCDC6-201ENST00000263102 PICALMQ13492 652 aa17.29■□□□□ 0.36
CCDC6-201ENST00000263102 IQCA1Q86XH1 822 aa17.29■□□□□ 0.36
CCDC6-201ENST00000263102 RAB34Q9BZG1 259 aa17.29■□□□□ 0.36
CCDC6-201ENST00000263102 SLC12A7Q9Y666 1083 aa17.29■□□□□ 0.36
CCDC6-201ENST00000263102 MBD3O95983 291 aa17.29■□□□□ 0.36
CCDC6-201ENST00000263102 ERLIN1O75477 346 aa17.29■□□□□ 0.36
CCDC6-201ENST00000263102 FERP16591 822 aa17.29■□□□□ 0.36
CCDC6-201ENST00000263102 VPS36Q86VN1 386 aa17.29■□□□□ 0.36
CCDC6-201ENST00000263102 TMX1Q9H3N1 280 aa17.29■□□□□ 0.36
CCDC6-201ENST00000263102 CFAP45Q9UL16 551 aa17.29■□□□□ 0.36
CCDC6-201ENST00000263102 TDRD12Q587J7 1177 aaKnown RBP17.29■□□□□ 0.36
CCDC6-201ENST00000263102 ARHGAP29Q52LW3 1261 aa17.29■□□□□ 0.36
CCDC6-201ENST00000263102 CFAP100Q494V2 611 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms