RNA–Protein interactions for RNA: ENST00000262962.11

CCDC94-201, Transcript of Coiled-coil domain-containing protein 94, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC94, Length 1,434 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC94-201ENST00000262962 PRIM1P49642 420 aaKnown RBP22.15■■□□□ 1.14
CCDC94-201ENST00000262962 TMOD3Q9NYL9 352 aa22.15■■□□□ 1.14
CCDC94-201ENST00000262962 NFATC2IPQ8NCF5 419 aa22.14■■□□□ 1.14
CCDC94-201ENST00000262962 BTAF1O14981 1849 aa22.14■■□□□ 1.13
CCDC94-201ENST00000262962 SF3B2Q13435 895 aaKnown RBP22.14■■□□□ 1.13
CCDC94-201ENST00000262962 TAF7Q15545 349 aaPredicted RBP22.14■■□□□ 1.13
CCDC94-201ENST00000262962 SYTL4Q96C24 671 aaPredicted RBP22.14■■□□□ 1.13
CCDC94-201ENST00000262962 IL16Q14005 1332 aa22.14■■□□□ 1.13
CCDC94-201ENST00000262962 PAPPAQ13219 1627 aa22.13■■□□□ 1.13
CCDC94-201ENST00000262962 KDM3BQ7LBC6 1761 aa22.13■■□□□ 1.13
CCDC94-201ENST00000262962 YTHDC1Q96MU7 727 aaKnown RBP22.13■■□□□ 1.13
CCDC94-201ENST00000262962 TRIM37O94972 964 aa22.12■■□□□ 1.13
CCDC94-201ENST00000262962 PIGBQ92521 554 aa22.12■■□□□ 1.13
CCDC94-201ENST00000262962 BABAM1Q9NWV8 329 aa22.12■■□□□ 1.13
CCDC94-201ENST00000262962 KCNQ2O43526 872 aa22.11■■□□□ 1.13
CCDC94-201ENST00000262962 CFAP44Q96MT7 982 aa22.11■■□□□ 1.13
CCDC94-201ENST00000262962 BCL11BQ9C0K0 894 aaPredicted RBP22.11■■□□□ 1.13
CCDC94-201ENST00000262962 IFT57Q9NWB7 429 aa22.11■■□□□ 1.13
CCDC94-201ENST00000262962 BTBD11A6QL63 1104 aa22.1■■□□□ 1.13
CCDC94-201ENST00000262962 GNAI1P63096 354 aa22.1■■□□□ 1.13
CCDC94-201ENST00000262962 GOLGA2Q08379 1002 aa22.1■■□□□ 1.13
CCDC94-201ENST00000262962 CCDC125Q86Z20 511 aa22.1■■□□□ 1.13
CCDC94-201ENST00000262962 TNS1Q9HBL0 1735 aaKnown RBP22.09■■□□□ 1.13
CCDC94-201ENST00000262962 ZNF853P0CG23 659 aa22.09■■□□□ 1.13
CCDC94-201ENST00000262962 UBR2Q8IWV8 1755 aa22.09■■□□□ 1.13
CCDC94-201ENST00000262962 CHL1O00533 1208 aa22.08■■□□□ 1.13
CCDC94-201ENST00000262962 LAS1LQ9Y4W2 734 aaKnown RBP22.08■■□□□ 1.13
CCDC94-201ENST00000262962 TSPYL4Q9UJ04 414 aa22.06■■□□□ 1.12
CCDC94-201ENST00000262962 E9PSI1 815 aa22.06■■□□□ 1.12
CCDC94-201ENST00000262962 PTF1AQ7RTS3 328 aa22.06■■□□□ 1.12
CCDC94-201ENST00000262962 MIS18AQ9NYP9 233 aa22.06■■□□□ 1.12
CCDC94-201ENST00000262962 ZNF790Q6PG37 636 aa22.05■■□□□ 1.12
CCDC94-201ENST00000262962 MYH16Q9H6N6 1097 aa22.05■■□□□ 1.12
CCDC94-201ENST00000262962 SPINK5Q9NQ38 1064 aaPredicted RBP22.05■■□□□ 1.12
CCDC94-201ENST00000262962 MBIPQ9NS73 344 aa22.05■■□□□ 1.12
CCDC94-201ENST00000262962 LY75O60449 1722 aa22.04■■□□□ 1.12
CCDC94-201ENST00000262962 SLFN5Q08AF3 891 aa22.04■■□□□ 1.12
CCDC94-201ENST00000262962 SLC39A6Q13433 755 aa22.04■■□□□ 1.12
CCDC94-201ENST00000262962 TTC5Q8N0Z6 440 aa22.04■■□□□ 1.12
CCDC94-201ENST00000262962 SMARCC1Q92922 1105 aaPredicted RBP22.04■■□□□ 1.12
CCDC94-201ENST00000262962 ATG3Q9NT62 314 aa22.04■■□□□ 1.12
CCDC94-201ENST00000262962 ASAP1Q9ULH1 1129 aa22.04■■□□□ 1.12
CCDC94-201ENST00000262962 APBA3O96018 575 aa22.03■■□□□ 1.12
CCDC94-201ENST00000262962 BAG6P46379 1132 aa22.03■■□□□ 1.12
CCDC94-201ENST00000262962 RGPD3A6NKT7 1758 aaPredicted RBP22.03■■□□□ 1.12
CCDC94-201ENST00000262962 RGPD4Q7Z3J3 1758 aa22.03■■□□□ 1.12
CCDC94-201ENST00000262962 KCPQ6ZWJ8 1503 aa22.02■■□□□ 1.12
CCDC94-201ENST00000262962 CDCA7LQ96GN5 454 aa22.02■■□□□ 1.12
CCDC94-201ENST00000262962 FANCIQ9NVI1 1328 aa22.02■■□□□ 1.11
CCDC94-201ENST00000262962 PALLDQ8WX93 1383 aa22.01■■□□□ 1.11
CCDC94-201ENST00000262962 DEFB132Q7Z7B7 95 aa22.01■■□□□ 1.11
CCDC94-201ENST00000262962 TSR2Q969E8 191 aaKnown RBP22.01■■□□□ 1.11
CCDC94-201ENST00000262962 ZNF831Q5JPB2 1677 aa22.01■■□□□ 1.11
CCDC94-201ENST00000262962 KCNQ3O43525 872 aa22■■□□□ 1.11
CCDC94-201ENST00000262962 EIF4A1P60842 406 aaKnown RBP21.99■■□□□ 1.11
CCDC94-201ENST00000262962 TRMT2AQ8IZ69 625 aaKnown RBP21.99■■□□□ 1.11
CCDC94-201ENST00000262962 CICQ96RK0 1608 aaPredicted RBP21.99■■□□□ 1.11
CCDC94-201ENST00000262962 EN1Q05925 392 aaPredicted RBP21.98■■□□□ 1.11
CCDC94-201ENST00000262962 FMNL2Q96PY5 1086 aa21.98■■□□□ 1.11
CCDC94-201ENST00000262962 DUSP27Q5VZP5 1158 aa21.97■■□□□ 1.11
CCDC94-201ENST00000262962 PLSCR1O15162 318 aa21.97■■□□□ 1.11
CCDC94-201ENST00000262962 PTCD1O75127 700 aaKnown RBP21.97■■□□□ 1.11
CCDC94-201ENST00000262962 ZNF496Q96IT1 587 aaPredicted RBP21.97■■□□□ 1.11
CCDC94-201ENST00000262962 HEG1Q9ULI3 1381 aa21.96■■□□□ 1.11
CCDC94-201ENST00000262962 LAMB4A4D0S4 1761 aa21.96■■□□□ 1.11
CCDC94-201ENST00000262962 C5P01031 1676 aa21.96■■□□□ 1.11
CCDC94-201ENST00000262962 RBM42Q9BTD8 480 aaKnown RBP21.96■■□□□ 1.11
CCDC94-201ENST00000262962 TJP1Q07157 1748 aa21.95■■□□□ 1.1
CCDC94-201ENST00000262962 VSIG10Q8N0Z9 540 aa21.95■■□□□ 1.1
CCDC94-201ENST00000262962 TAF1LQ8IZX4 1826 aa21.94■■□□□ 1.1
CCDC94-201ENST00000262962 LOC102724428A0A0B4J2F2 783 aa21.94■■□□□ 1.1
CCDC94-201ENST00000262962 SIK1P57059 783 aa21.94■■□□□ 1.1
CCDC94-201ENST00000262962 EZH2Q15910 746 aaKnown RBP21.93■■□□□ 1.1
CCDC94-201ENST00000262962 COL5A3P25940 1745 aaPredicted RBP21.92■■□□□ 1.1
CCDC94-201ENST00000262962 HOXB7P09629 217 aa21.92■■□□□ 1.1
CCDC94-201ENST00000262962 SNRPA1P09661 255 aaKnown RBP21.92■■□□□ 1.1
CCDC94-201ENST00000262962 EXOSC9Q06265 439 aaKnown RBP21.92■■□□□ 1.1
CCDC94-201ENST00000262962 SOS1Q07889 1333 aaPredicted RBP21.92■■□□□ 1.1
CCDC94-201ENST00000262962 GIGYF1O75420 1035 aaPredicted RBP21.91■■□□□ 1.1
CCDC94-201ENST00000262962 KRT24Q2M2I5 525 aa21.91■■□□□ 1.1
CCDC94-201ENST00000262962 C8orf58Q8NAV2 365 aa21.91■■□□□ 1.1
CCDC94-201ENST00000262962 SLC4A9Q96Q91 983 aa21.91■■□□□ 1.1
CCDC94-201ENST00000262962 ATP6V1AP38606 617 aa21.9■■□□□ 1.1
CCDC94-201ENST00000262962 SLC27A3Q5K4L6 730 aa21.9■■□□□ 1.1
CCDC94-201ENST00000262962 TEX13AQ9BXU3 409 aaPredicted RBP21.9■■□□□ 1.1
CCDC94-201ENST00000262962 CCNL1Q9UK58 526 aaPredicted RBP21.9■■□□□ 1.1
CCDC94-201ENST00000262962 RREB1Q92766 1687 aa21.9■■□□□ 1.1
CCDC94-201ENST00000262962 CAMKK2Q96RR4 588 aa21.89■■□□□ 1.1
CCDC94-201ENST00000262962 TWISTNBQ3B726 338 aaPredicted RBP21.89■■□□□ 1.09
CCDC94-201ENST00000262962 TSPYL6Q8N831 410 aa21.89■■□□□ 1.09
CCDC94-201ENST00000262962 CT47B1P0C2W7 299 aaPredicted RBP21.88■■□□□ 1.09
CCDC94-201ENST00000262962 TXNRD1Q16881 649 aa21.88■■□□□ 1.09
CCDC94-201ENST00000262962 PRAMEF22A3QJZ6 481 aa21.87■■□□□ 1.09
CCDC94-201ENST00000262962 ELL2O00472 640 aaPredicted RBP21.87■■□□□ 1.09
CCDC94-201ENST00000262962 HMGB2P26583 209 aaKnown RBP21.87■■□□□ 1.09
CCDC94-201ENST00000262962 DNAJC10Q8IXB1 793 aa21.87■■□□□ 1.09
CCDC94-201ENST00000262962 CACNA1FO60840 1977 aa21.86■■□□□ 1.09
CCDC94-201ENST00000262962 ITPK1Q13572 414 aa21.86■■□□□ 1.09
CCDC94-201ENST00000262962 PROM2Q8N271 834 aa21.86■■□□□ 1.09
CCDC94-201ENST00000262962 CHMP4AQ9BY43 222 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms