RNA–Protein interactions for RNA: ENST00000262395.9

TRAF4-201, Transcript of TNF receptor associated factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF4, Length 2,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-201ENST00000262395 PDCL3Q9H2J4 239 aa21.86■■□□□ 1.09
TRAF4-201ENST00000262395 IL1RAPL2Q9NP60 686 aa21.86■■□□□ 1.09
TRAF4-201ENST00000262395 MX1P20591 662 aa21.86■■□□□ 1.09
TRAF4-201ENST00000262395 MTHFSDQ2M296 383 aaKnown RBP21.86■■□□□ 1.09
TRAF4-201ENST00000262395 LRRCC1Q9C099 1032 aa21.86■■□□□ 1.09
TRAF4-201ENST00000262395 IL25Q9H293 177 aa21.86■■□□□ 1.09
TRAF4-201ENST00000262395 UQCRHLA0A096LP55 91 aa21.85■■□□□ 1.09
TRAF4-201ENST00000262395 BRD1O95696 1058 aa21.85■■□□□ 1.09
TRAF4-201ENST00000262395 UQCRHP07919 91 aa21.85■■□□□ 1.09
TRAF4-201ENST00000262395 RTF1Q92541 710 aaKnown RBP21.85■■□□□ 1.09
TRAF4-201ENST00000262395 FKBP5Q13451 457 aaPredicted RBP21.85■■□□□ 1.09
TRAF4-201ENST00000262395 A2ML1A8K2U0 1454 aa21.85■■□□□ 1.09
TRAF4-201ENST00000262395 ZNF500O60304 480 aaPredicted RBP21.84■■□□□ 1.09
TRAF4-201ENST00000262395 CHMLP26374 656 aa21.84■■□□□ 1.09
TRAF4-201ENST00000262395 OSBPL3Q9H4L5 887 aa21.84■■□□□ 1.09
TRAF4-201ENST00000262395 RICTORQ6R327 1708 aa21.84■■□□□ 1.09
TRAF4-201ENST00000262395 KIAA0232Q92628 1395 aa21.83■■□□□ 1.09
TRAF4-201ENST00000262395 HS1BP3Q53T59 392 aa21.83■■□□□ 1.09
TRAF4-201ENST00000262395 TTC21BQ7Z4L5 1316 aa21.83■■□□□ 1.08
TRAF4-201ENST00000262395 CCT4P50991 539 aaKnown RBP21.83■■□□□ 1.08
TRAF4-201ENST00000262395 MAP3K19Q56UN5 1328 aa21.82■■□□□ 1.08
TRAF4-201ENST00000262395 MCCP23508 829 aa21.82■■□□□ 1.08
TRAF4-201ENST00000262395 NUTM1Q86Y26 1132 aa21.82■■□□□ 1.08
TRAF4-201ENST00000262395 ZNF830Q96NB3 372 aaPredicted RBP21.82■■□□□ 1.08
TRAF4-201ENST00000262395 ACEP12821 1306 aa21.82■■□□□ 1.08
TRAF4-201ENST00000262395 MBD3O95983 291 aa21.82■■□□□ 1.08
TRAF4-201ENST00000262395 TSPY26PQ9H489 355 aa21.82■■□□□ 1.08
TRAF4-201ENST00000262395 LRRFIP2Q9Y608 721 aaKnown RBP21.81■■□□□ 1.08
TRAF4-201ENST00000262395 CRB1P82279 1406 aa21.81■■□□□ 1.08
TRAF4-201ENST00000262395 STK31Q9BXU1 1019 aa21.81■■□□□ 1.08
TRAF4-201ENST00000262395 CCDC39Q9UFE4 941 aa21.8■■□□□ 1.08
TRAF4-201ENST00000262395 RIMBP3CA6NJZ7 1639 aa21.8■■□□□ 1.08
TRAF4-201ENST00000262395 RIMBP3BA6NNM3 1639 aa21.8■■□□□ 1.08
TRAF4-201ENST00000262395 RIMBP3Q9UFD9 1639 aa21.8■■□□□ 1.08
TRAF4-201ENST00000262395 DLC1Q96QB1 1528 aa21.8■■□□□ 1.08
TRAF4-201ENST00000262395 USP48Q86UV5 1035 aa21.8■■□□□ 1.08
TRAF4-201ENST00000262395 CUL4AQ13619 759 aa21.79■■□□□ 1.08
TRAF4-201ENST00000262395 FLIIQ13045 1269 aa21.79■■□□□ 1.08
TRAF4-201ENST00000262395 JARID2Q92833 1246 aaPredicted RBP21.79■■□□□ 1.08
TRAF4-201ENST00000262395 SALL3Q9BXA9 1300 aa21.79■■□□□ 1.08
TRAF4-201ENST00000262395 MCM2P49736 904 aa21.76■■□□□ 1.07
TRAF4-201ENST00000262395 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.76■■□□□ 1.07
TRAF4-201ENST00000262395 RIMS1Q86UR5 1692 aaKnown RBP21.76■■□□□ 1.07
TRAF4-201ENST00000262395 ATP8B2P98198 1209 aa21.76■■□□□ 1.07
TRAF4-201ENST00000262395 C17orf53Q8N3J3 647 aaPredicted RBP21.76■■□□□ 1.07
TRAF4-201ENST00000262395 DNTTIP2Q5QJE6 756 aaKnown RBP21.75■■□□□ 1.07
TRAF4-201ENST00000262395 USP25Q9UHP3 1055 aa21.75■■□□□ 1.07
TRAF4-201ENST00000262395 CNPY2Q9Y2B0 182 aa21.75■■□□□ 1.07
TRAF4-201ENST00000262395 CPA1P15085 419 aa21.75■■□□□ 1.07
TRAF4-201ENST00000262395 PLCB2Q00722 1185 aa21.75■■□□□ 1.07
TRAF4-201ENST00000262395 TSC1Q92574 1164 aa21.74■■□□□ 1.07
TRAF4-201ENST00000262395 SRCIN1Q9C0H9 1055 aa21.74■■□□□ 1.07
TRAF4-201ENST00000262395 GNAI3P08754 354 aa21.73■■□□□ 1.07
TRAF4-201ENST00000262395 ROBO2Q9HCK4 1378 aa21.73■■□□□ 1.07
TRAF4-201ENST00000262395 NUTM2GQ5VZR2 741 aa21.73■■□□□ 1.07
TRAF4-201ENST00000262395 SETD1AO15047 1707 aaKnown RBP21.72■■□□□ 1.07
TRAF4-201ENST00000262395 SYAP1Q96A49 352 aaPredicted RBP21.72■■□□□ 1.07
TRAF4-201ENST00000262395 INTS4Q96HW7 963 aaKnown RBP21.72■■□□□ 1.07
TRAF4-201ENST00000262395 EYA1Q99502 592 aa21.72■■□□□ 1.07
TRAF4-201ENST00000262395 PODXL2Q9NZ53 605 aa21.72■■□□□ 1.07
TRAF4-201ENST00000262395 LTV1Q96GA3 475 aaPredicted RBP21.72■■□□□ 1.07
TRAF4-201ENST00000262395 MON2Q7Z3U7 1717 aa21.72■■□□□ 1.07
TRAF4-201ENST00000262395 TCHHQ07283 1943 aa21.71■■□□□ 1.07
TRAF4-201ENST00000262395 C3P01024 1663 aa21.71■■□□□ 1.07
TRAF4-201ENST00000262395 SURF6O75683 361 aaKnown RBP21.71■■□□□ 1.07
TRAF4-201ENST00000262395 AMPHP49418 695 aa21.71■■□□□ 1.07
TRAF4-201ENST00000262395 FAM69CQ0P6D2 419 aa21.71■■□□□ 1.07
TRAF4-201ENST00000262395 CSPP1Q1MSJ5 1256 aa21.71■■□□□ 1.07
TRAF4-201ENST00000262395 TERF1P54274 439 aa21.71■■□□□ 1.07
TRAF4-201ENST00000262395 DDX54Q8TDD1 881 aaKnown RBP21.71■■□□□ 1.07
TRAF4-201ENST00000262395 USP44Q9H0E7 712 aa21.71■■□□□ 1.07
TRAF4-201ENST00000262395 PHAXQ9H814 394 aaKnown RBP21.71■■□□□ 1.07
TRAF4-201ENST00000262395 TTC12Q9H892 705 aaPredicted RBP21.71■■□□□ 1.07
TRAF4-201ENST00000262395 HCLS1P14317 486 aaPredicted RBP21.7■■□□□ 1.06
TRAF4-201ENST00000262395 ANAPC15P60006 121 aa21.7■■□□□ 1.06
TRAF4-201ENST00000262395 CYB5RLQ6IPT4 315 aa21.7■■□□□ 1.06
TRAF4-201ENST00000262395 PEAK1Q9H792 1746 aa21.7■■□□□ 1.06
TRAF4-201ENST00000262395 UBTFL1P0CB47 393 aaPredicted RBP21.7■■□□□ 1.06
TRAF4-201ENST00000262395 CCDC30Q5VVM6 783 aa21.7■■□□□ 1.06
TRAF4-201ENST00000262395 SPG7Q9UQ90 795 aa21.7■■□□□ 1.06
TRAF4-201ENST00000262395 WDR33Q9C0J8 1336 aaKnown RBP21.7■■□□□ 1.06
TRAF4-201ENST00000262395 FIBPO43427 364 aa21.69■■□□□ 1.06
TRAF4-201ENST00000262395 KIAA2012Q0VF49 1180 aa21.69■■□□□ 1.06
TRAF4-201ENST00000262395 RASEFQ8IZ41 740 aa21.69■■□□□ 1.06
TRAF4-201ENST00000262395 FAM177BA6PVY3 158 aa21.69■■□□□ 1.06
TRAF4-201ENST00000262395 MCM5P33992 734 aa21.69■■□□□ 1.06
TRAF4-201ENST00000262395 SASS6Q6UVJ0 657 aa21.68■■□□□ 1.06
TRAF4-201ENST00000262395 NRXN3Q9Y4C0 1643 aa21.68■■□□□ 1.06
TRAF4-201ENST00000262395 CWC27Q6UX04 472 aaKnown RBP21.68■■□□□ 1.06
TRAF4-201ENST00000262395 PPP1R42Q7Z4L9 355 aa21.68■■□□□ 1.06
TRAF4-201ENST00000262395 STAP2Q9UGK3 403 aa21.68■■□□□ 1.06
TRAF4-201ENST00000262395 ITSN1Q15811 1721 aa21.68■■□□□ 1.06
TRAF4-201ENST00000262395 EIF2S2P20042 333 aaKnown RBP21.67■■□□□ 1.06
TRAF4-201ENST00000262395 HSPA4P34932 840 aa21.67■■□□□ 1.06
TRAF4-201ENST00000262395 OVOS2A0A0J9YW53 1432 aa21.67■■□□□ 1.06
TRAF4-201ENST00000262395 OVOS2Q6IE36 1432 aa21.67■■□□□ 1.06
TRAF4-201ENST00000262395 RPAP1Q9BWH6 1393 aaPredicted RBP21.67■■□□□ 1.06
TRAF4-201ENST00000262395 AK2P54819 239 aa21.67■■□□□ 1.06
TRAF4-201ENST00000262395 SNX14Q9Y5W7 946 aa21.67■■□□□ 1.06
TRAF4-201ENST00000262395 NRKQ7Z2Y5 1582 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms