RNA–Protein interactions for RNA: ENST00000261692.6

CDK2AP1-201, Transcript of cyclin dependent kinase 2 associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK2AP1, Length 1,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK2AP1-201ENST00000261692 SYTL4Q96C24 671 aaPredicted RBP31.25■■■□□ 2.59
CDK2AP1-201ENST00000261692 TOGARAM1Q9Y4F4 1720 aa31.25■■■□□ 2.59
CDK2AP1-201ENST00000261692 ACSBG1Q96GR2 724 aa31.24■■■□□ 2.59
CDK2AP1-201ENST00000261692 E9PSI1 815 aa31.24■■■□□ 2.59
CDK2AP1-201ENST00000261692 DOT1LQ8TEK3 1739 aa31.23■■■□□ 2.59
CDK2AP1-201ENST00000261692 VIRMAQ69YN4 1812 aaKnown RBP31.22■■■□□ 2.59
CDK2AP1-201ENST00000261692 BTBD11A6QL63 1104 aa31.22■■■□□ 2.59
CDK2AP1-201ENST00000261692 LAS1LQ9Y4W2 734 aaKnown RBP31.22■■■□□ 2.59
CDK2AP1-201ENST00000261692 ZNF853P0CG23 659 aa31.21■■■□□ 2.59
CDK2AP1-201ENST00000261692 MYH16Q9H6N6 1097 aa31.21■■■□□ 2.59
CDK2AP1-201ENST00000261692 CHL1O00533 1208 aa31.2■■■□□ 2.59
CDK2AP1-201ENST00000261692 ILDR2Q71H61 639 aa31.2■■■□□ 2.59
CDK2AP1-201ENST00000261692 EP400Q96L91 3159 aa31.2■■■□□ 2.59
CDK2AP1-201ENST00000261692 PIGBQ92521 554 aa31.2■■■□□ 2.58
CDK2AP1-201ENST00000261692 TSPYL4Q9UJ04 414 aa31.2■■■□□ 2.58
CDK2AP1-201ENST00000261692 GTF3C3Q9Y5Q9 886 aa31.18■■■□□ 2.58
CDK2AP1-201ENST00000261692 KCNQ2O43526 872 aa31.17■■■□□ 2.58
CDK2AP1-201ENST00000261692 SLFN5Q08AF3 891 aa31.17■■■□□ 2.58
CDK2AP1-201ENST00000261692 BCL11BQ9C0K0 894 aaPredicted RBP31.17■■■□□ 2.58
CDK2AP1-201ENST00000261692 SIPA1L3O60292 1781 aaPredicted RBP31.17■■■□□ 2.58
CDK2AP1-201ENST00000261692 NHSQ6T4R5 1651 aa31.16■■■□□ 2.58
CDK2AP1-201ENST00000261692 SPINK5Q9NQ38 1064 aaPredicted RBP31.16■■■□□ 2.58
CDK2AP1-201ENST00000261692 KAT6BQ8WYB5 2073 aa31.15■■■□□ 2.58
CDK2AP1-201ENST00000261692 TTC5Q8N0Z6 440 aa31.15■■■□□ 2.58
CDK2AP1-201ENST00000261692 CDCA7LQ96GN5 454 aa31.15■■■□□ 2.58
CDK2AP1-201ENST00000261692 MBIPQ9NS73 344 aa31.15■■■□□ 2.58
CDK2AP1-201ENST00000261692 ITGB4P16144 1822 aa31.15■■■□□ 2.58
CDK2AP1-201ENST00000261692 ZNF790Q6PG37 636 aa31.14■■■□□ 2.58
CDK2AP1-201ENST00000261692 MIS18AQ9NYP9 233 aa31.14■■■□□ 2.58
CDK2AP1-201ENST00000261692 FANCIQ9NVI1 1328 aa31.12■■■□□ 2.57
CDK2AP1-201ENST00000261692 SBF2Q86WG5 1849 aa31.11■■■□□ 2.57
CDK2AP1-201ENST00000261692 TRIM37O94972 964 aa31.11■■■□□ 2.57
CDK2AP1-201ENST00000261692 SLC39A6Q13433 755 aa31.11■■■□□ 2.57
CDK2AP1-201ENST00000261692 TRMT2AQ8IZ69 625 aaKnown RBP31.11■■■□□ 2.57
CDK2AP1-201ENST00000261692 SMARCC1Q92922 1105 aaPredicted RBP31.11■■■□□ 2.57
CDK2AP1-201ENST00000261692 TSR2Q969E8 191 aaKnown RBP31.11■■■□□ 2.57
CDK2AP1-201ENST00000261692 ATG3Q9NT62 314 aa31.09■■■□□ 2.57
CDK2AP1-201ENST00000261692 ASAP1Q9ULH1 1129 aa31.09■■■□□ 2.57
CDK2AP1-201ENST00000261692 DUSP27Q5VZP5 1158 aa31.09■■■□□ 2.57
CDK2AP1-201ENST00000261692 KDM3BQ7LBC6 1761 aa31.07■■■□□ 2.56
CDK2AP1-201ENST00000261692 PAPPAQ13219 1627 aa31.06■■■□□ 2.56
CDK2AP1-201ENST00000261692 EIF4A1P60842 406 aaKnown RBP31.06■■■□□ 2.56
CDK2AP1-201ENST00000261692 PTF1AQ7RTS3 328 aa31.06■■■□□ 2.56
CDK2AP1-201ENST00000261692 FMNL2Q96PY5 1086 aa31.06■■■□□ 2.56
CDK2AP1-201ENST00000261692 KCNQ3O43525 872 aa31.05■■■□□ 2.56
CDK2AP1-201ENST00000261692 PALLDQ8WX93 1383 aa31.04■■■□□ 2.56
CDK2AP1-201ENST00000261692 BTAF1O14981 1849 aa31.03■■■□□ 2.56
CDK2AP1-201ENST00000261692 ZNF496Q96IT1 587 aaPredicted RBP31.02■■■□□ 2.56
CDK2AP1-201ENST00000261692 PTCD1O75127 700 aaKnown RBP31.01■■■□□ 2.55
CDK2AP1-201ENST00000261692 KCPQ6ZWJ8 1503 aa31■■■□□ 2.55
CDK2AP1-201ENST00000261692 SOS1Q07889 1333 aaPredicted RBP31■■■□□ 2.55
CDK2AP1-201ENST00000261692 EXOSC9Q06265 439 aaKnown RBP31■■■□□ 2.55
CDK2AP1-201ENST00000261692 VSIG10Q8N0Z9 540 aa31■■■□□ 2.55
CDK2AP1-201ENST00000261692 HEG1Q9ULI3 1381 aa30.99■■■□□ 2.55
CDK2AP1-201ENST00000261692 UBR2Q8IWV8 1755 aa30.99■■■□□ 2.55
CDK2AP1-201ENST00000261692 HOXB7P09629 217 aa30.98■■■□□ 2.55
CDK2AP1-201ENST00000261692 RBM42Q9BTD8 480 aaKnown RBP30.98■■■□□ 2.55
CDK2AP1-201ENST00000261692 APBA3O96018 575 aa30.98■■■□□ 2.55
CDK2AP1-201ENST00000261692 SNRPA1P09661 255 aaKnown RBP30.98■■■□□ 2.55
CDK2AP1-201ENST00000261692 SF3B2Q13435 895 aaKnown RBP30.98■■■□□ 2.55
CDK2AP1-201ENST00000261692 LOC102724428A0A0B4J2F2 783 aa30.97■■■□□ 2.55
CDK2AP1-201ENST00000261692 CT47B1P0C2W7 299 aaPredicted RBP30.97■■■□□ 2.55
CDK2AP1-201ENST00000261692 SIK1P57059 783 aa30.97■■■□□ 2.55
CDK2AP1-201ENST00000261692 CCDC125Q86Z20 511 aa30.97■■■□□ 2.55
CDK2AP1-201ENST00000261692 PLSCR1O15162 318 aa30.96■■■□□ 2.55
CDK2AP1-201ENST00000261692 GIGYF1O75420 1035 aaPredicted RBP30.96■■■□□ 2.55
CDK2AP1-201ENST00000261692 C8orf58Q8NAV2 365 aa30.96■■■□□ 2.55
CDK2AP1-201ENST00000261692 CHMP4AQ9BY43 222 aa30.96■■■□□ 2.55
CDK2AP1-201ENST00000261692 TWISTNBQ3B726 338 aaPredicted RBP30.95■■■□□ 2.55
CDK2AP1-201ENST00000261692 KRT24Q2M2I5 525 aa30.95■■■□□ 2.54
CDK2AP1-201ENST00000261692 TEX13AQ9BXU3 409 aaPredicted RBP30.95■■■□□ 2.54
CDK2AP1-201ENST00000261692 TNS1Q9HBL0 1735 aaKnown RBP30.92■■■□□ 2.54
CDK2AP1-201ENST00000261692 ELL2O00472 640 aaPredicted RBP30.92■■■□□ 2.54
CDK2AP1-201ENST00000261692 HMGB2P26583 209 aaKnown RBP30.92■■■□□ 2.54
CDK2AP1-201ENST00000261692 TSPYL6Q8N831 410 aa30.92■■■□□ 2.54
CDK2AP1-201ENST00000261692 ATP6V1AP38606 617 aa30.91■■■□□ 2.54
CDK2AP1-201ENST00000261692 ZNF428Q96B54 188 aa30.91■■■□□ 2.54
CDK2AP1-201ENST00000261692 SLC27A3Q5K4L6 730 aa30.91■■■□□ 2.54
CDK2AP1-201ENST00000261692 SLC4A9Q96Q91 983 aa30.9■■■□□ 2.54
CDK2AP1-201ENST00000261692 VAMP4O75379 141 aa30.89■■■□□ 2.54
CDK2AP1-201ENST00000261692 BAG6P46379 1132 aa30.89■■■□□ 2.54
CDK2AP1-201ENST00000261692 CCNL1Q9UK58 526 aaPredicted RBP30.89■■■□□ 2.54
CDK2AP1-201ENST00000261692 ZNF831Q5JPB2 1677 aa30.88■■■□□ 2.53
CDK2AP1-201ENST00000261692 STARD3NLO95772 234 aa30.87■■■□□ 2.53
CDK2AP1-201ENST00000261692 LY75O60449 1722 aa30.87■■■□□ 2.53
CDK2AP1-201ENST00000261692 HDGFL1Q5TGJ6 251 aa30.86■■■□□ 2.53
CDK2AP1-201ENST00000261692 PRAMEF22A3QJZ6 481 aa30.85■■■□□ 2.53
CDK2AP1-201ENST00000261692 DNAJC10Q8IXB1 793 aa30.85■■■□□ 2.53
CDK2AP1-201ENST00000261692 CICQ96RK0 1608 aaPredicted RBP30.85■■■□□ 2.53
CDK2AP1-201ENST00000261692 RGPD3A6NKT7 1758 aaPredicted RBP30.85■■■□□ 2.53
CDK2AP1-201ENST00000261692 RGPD4Q7Z3J3 1758 aa30.85■■■□□ 2.53
CDK2AP1-201ENST00000261692 SOCS7O14512 581 aa30.84■■■□□ 2.53
CDK2AP1-201ENST00000261692 EIF2S2P20042 333 aaKnown RBP30.84■■■□□ 2.53
CDK2AP1-201ENST00000261692 TXNRD1Q16881 649 aa30.84■■■□□ 2.53
CDK2AP1-201ENST00000261692 CCDC30Q5VVM6 783 aa30.84■■■□□ 2.53
CDK2AP1-201ENST00000261692 USP16Q9Y5T5 823 aa30.84■■■□□ 2.53
CDK2AP1-201ENST00000261692 ITPK1Q13572 414 aa30.82■■■□□ 2.52
CDK2AP1-201ENST00000261692 ERBB4Q15303 1308 aa30.81■■■□□ 2.52
CDK2AP1-201ENST00000261692 C5P01031 1676 aa30.81■■■□□ 2.52
CDK2AP1-201ENST00000261692 CYP19A1P11511 503 aaPredicted RBP30.8■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms