RNA–Protein interactions for RNA: ENST00000261427.9

UBE2K-201, Transcript of ubiquitin conjugating enzyme E2 K, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2K, Length 5,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2K-201ENST00000261427 PHF8Q9UPP1 1060 aa23.29■■□□□ 1.32
UBE2K-201ENST00000261427 CC2D2AQ9P2K1 1620 aa23.29■■□□□ 1.32
UBE2K-201ENST00000261427 ZRSR2Q15696 482 aaKnown RBP23.29■■□□□ 1.32
UBE2K-201ENST00000261427 ANKRD18AQ8IVF6 992 aa23.29■■□□□ 1.32
UBE2K-201ENST00000261427 RARSP54136 660 aaKnown RBP23.29■■□□□ 1.32
UBE2K-201ENST00000261427 PIP4K2BP78356 416 aa23.29■■□□□ 1.32
UBE2K-201ENST00000261427 HMGB1P09429 215 aaKnown RBP23.28■■□□□ 1.32
UBE2K-201ENST00000261427 SSH1Q8WYL5 1049 aa23.28■■□□□ 1.32
UBE2K-201ENST00000261427 CCDC66A2RUB6 948 aa23.28■■□□□ 1.32
UBE2K-201ENST00000261427 THUMPD2Q9BTF0 503 aaKnown RBP23.28■■□□□ 1.32
UBE2K-201ENST00000261427 NEFHP12036 1026 aa23.28■■□□□ 1.32
UBE2K-201ENST00000261427 DESP17661 470 aa23.28■■□□□ 1.32
UBE2K-201ENST00000261427 MAP3K11Q16584 847 aa23.28■■□□□ 1.32
UBE2K-201ENST00000261427 SH2B1Q9NRF2 756 aaPredicted RBP23.28■■□□□ 1.32
UBE2K-201ENST00000261427 LEKR1Q6ZMV7 388 aa23.27■■□□□ 1.32
UBE2K-201ENST00000261427 MYD88Q99836 296 aa23.27■■□□□ 1.32
UBE2K-201ENST00000261427 IQGAP2Q13576 1575 aa23.27■■□□□ 1.32
UBE2K-201ENST00000261427 IFIT5Q13325 482 aaKnown RBP23.27■■□□□ 1.32
UBE2K-201ENST00000261427 HYPKQ9NX55 129 aa23.27■■□□□ 1.32
UBE2K-201ENST00000261427 SEC63Q9UGP8 760 aaKnown RBP23.27■■□□□ 1.32
UBE2K-201ENST00000261427 MAP3K12Q12852 859 aa23.27■■□□□ 1.32
UBE2K-201ENST00000261427 CCDC184Q52MB2 194 aa23.27■■□□□ 1.32
UBE2K-201ENST00000261427 USP5P45974 858 aa23.26■■□□□ 1.31
UBE2K-201ENST00000261427 SKIDA1Q1XH10 827 aa23.26■■□□□ 1.31
UBE2K-201ENST00000261427 DNAAF4Q8WXU2 420 aa23.26■■□□□ 1.31
UBE2K-201ENST00000261427 NAPBQ9H115 298 aa23.26■■□□□ 1.31
UBE2K-201ENST00000261427 DBF4Q9UBU7 674 aaPredicted RBP23.26■■□□□ 1.31
UBE2K-201ENST00000261427 SPINK5Q9NQ38 1064 aaPredicted RBP23.26■■□□□ 1.31
UBE2K-201ENST00000261427 WDR97A6NE52 1622 aa23.26■■□□□ 1.31
UBE2K-201ENST00000261427 WASLO00401 505 aaPredicted RBP23.26■■□□□ 1.31
UBE2K-201ENST00000261427 NME9Q86XW9 330 aa23.26■■□□□ 1.31
UBE2K-201ENST00000261427 DDX11Q96FC9 970 aa23.26■■□□□ 1.31
UBE2K-201ENST00000261427 CAMSAP2Q08AD1 1489 aa23.25■■□□□ 1.31
UBE2K-201ENST00000261427 POLR3DP05423 398 aaPredicted RBP23.25■■□□□ 1.31
UBE2K-201ENST00000261427 EIF5P55010 431 aaKnown RBP23.25■■□□□ 1.31
UBE2K-201ENST00000261427 PRPF40BQ6NWY9 871 aaKnown RBP23.25■■□□□ 1.31
UBE2K-201ENST00000261427 PPP1R12BO60237 982 aaPredicted RBP23.25■■□□□ 1.31
UBE2K-201ENST00000261427 SCAND2PQ9GZW5 306 aaPredicted RBP23.25■■□□□ 1.31
UBE2K-201ENST00000261427 TNIP1Q15025 636 aa23.25■■□□□ 1.31
UBE2K-201ENST00000261427 PHAXQ9H814 394 aaKnown RBP23.25■■□□□ 1.31
UBE2K-201ENST00000261427 MKNK2Q9HBH9 465 aa23.25■■□□□ 1.31
UBE2K-201ENST00000261427 EIF3JO75822 258 aaKnown RBP23.24■■□□□ 1.31
UBE2K-201ENST00000261427 NKTRP30414 1462 aaKnown RBP23.24■■□□□ 1.31
UBE2K-201ENST00000261427 ADGRL1O94910 1474 aa23.24■■□□□ 1.31
UBE2K-201ENST00000261427 NSD2O96028 1365 aa23.24■■□□□ 1.31
UBE2K-201ENST00000261427 SEPT7Q16181 437 aaKnown RBP23.24■■□□□ 1.31
UBE2K-201ENST00000261427 ABCA10Q8WWZ4 1543 aa23.24■■□□□ 1.31
UBE2K-201ENST00000261427 PLEKHH1Q9ULM0 1364 aa23.23■■□□□ 1.31
UBE2K-201ENST00000261427 TSPYL1Q9H0U9 437 aa23.23■■□□□ 1.31
UBE2K-201ENST00000261427 BOLA2Q9H3K6 86 aa23.23■■□□□ 1.31
UBE2K-201ENST00000261427 TTC21BQ7Z4L5 1316 aa23.23■■□□□ 1.31
UBE2K-201ENST00000261427 SLC5A1P13866 664 aa23.23■■□□□ 1.31
UBE2K-201ENST00000261427 CTCFLQ8NI51 663 aaPredicted RBP23.23■■□□□ 1.31
UBE2K-201ENST00000261427 PTPRCP08575 1304 aa23.23■■□□□ 1.31
UBE2K-201ENST00000261427 EPB41L2O43491 1005 aaKnown RBP23.23■■□□□ 1.31
UBE2K-201ENST00000261427 CRACR2BQ8N4Y2 399 aaPredicted RBP23.23■■□□□ 1.31
UBE2K-201ENST00000261427 RNF41Q9H4P4 317 aaPredicted RBP23.23■■□□□ 1.31
UBE2K-201ENST00000261427 AMOTL2Q9Y2J4 779 aa23.22■■□□□ 1.31
UBE2K-201ENST00000261427 CCDC83Q8IWF9 413 aa23.22■■□□□ 1.31
UBE2K-201ENST00000261427 ZNF397Q8NF99 534 aaPredicted RBP23.22■■□□□ 1.31
UBE2K-201ENST00000261427 SEPT11Q9NVA2 429 aaKnown RBP23.22■■□□□ 1.31
UBE2K-201ENST00000261427 MINDY4BA8MYZ0 360 aa23.21■■□□□ 1.31
UBE2K-201ENST00000261427 FILIP1Q7Z7B0 1213 aa23.21■■□□□ 1.31
UBE2K-201ENST00000261427 IQCA1Q86XH1 822 aa23.21■■□□□ 1.31
UBE2K-201ENST00000261427 DZIP1Q86YF9 867 aaKnown RBP23.21■■□□□ 1.31
UBE2K-201ENST00000261427 SLF2Q8IX21 1173 aa23.21■■□□□ 1.31
UBE2K-201ENST00000261427 LRPPRCP42704 1394 aaKnown RBP23.21■■□□□ 1.31
UBE2K-201ENST00000261427 TEX13AQ9BXU3 409 aaPredicted RBP23.21■■□□□ 1.31
UBE2K-201ENST00000261427 TRMT112Q9UI30 125 aaKnown RBP23.21■■□□□ 1.31
UBE2K-201ENST00000261427 PIBF1Q8WXW3 757 aa23.2■■□□□ 1.31
UBE2K-201ENST00000261427 TAF4BQ92750 862 aa23.2■■□□□ 1.31
UBE2K-201ENST00000261427 ANKRD18BA2A2Z9 1011 aa23.2■■□□□ 1.3
UBE2K-201ENST00000261427 EMILIN1Q9Y6C2 1016 aa23.2■■□□□ 1.3
UBE2K-201ENST00000261427 POTEJP0CG39 1038 aa23.2■■□□□ 1.3
UBE2K-201ENST00000261427 TRIM21P19474 475 aaKnown RBP23.2■■□□□ 1.3
UBE2K-201ENST00000261427 CFAP100Q494V2 611 aa23.2■■□□□ 1.3
UBE2K-201ENST00000261427 RAB34Q9BZG1 259 aa23.2■■□□□ 1.3
UBE2K-201ENST00000261427 ARHGAP29Q52LW3 1261 aa23.19■■□□□ 1.3
UBE2K-201ENST00000261427 KIF14Q15058 1648 aa23.19■■□□□ 1.3
UBE2K-201ENST00000261427 ABCC5O15440 1437 aa23.19■■□□□ 1.3
UBE2K-201ENST00000261427 FAM177A1Q8N128 213 aaPredicted RBP23.19■■□□□ 1.3
UBE2K-201ENST00000261427 C8orf76Q96K31 380 aa23.19■■□□□ 1.3
UBE2K-201ENST00000261427 ANKIB1Q9P2G1 1089 aa23.19■■□□□ 1.3
UBE2K-201ENST00000261427 BRPF3Q9ULD4 1205 aa23.19■■□□□ 1.3
UBE2K-201ENST00000261427 SMARCA5O60264 1052 aaPredicted RBP23.18■■□□□ 1.3
UBE2K-201ENST00000261427 MATR3P43243 847 aaKnown RBP eCLIP23.18■■□□□ 1.32e-7■■■□□ 15.8
UBE2K-201ENST00000261427 ANO10Q9NW15 660 aa23.18■■□□□ 1.3
UBE2K-201ENST00000261427 FAM135AQ9P2D6 1515 aa23.18■■□□□ 1.3
UBE2K-201ENST00000261427 KIF2AO00139 706 aaPredicted RBP23.18■■□□□ 1.3
UBE2K-201ENST00000261427 MPRIPQ6WCQ1 1025 aa23.18■■□□□ 1.3
UBE2K-201ENST00000261427 KIAA1328Q86T90 577 aa23.18■■□□□ 1.3
UBE2K-201ENST00000261427 FERMT3Q86UX7 667 aa23.18■■□□□ 1.3
UBE2K-201ENST00000261427 ZNF213O14771 459 aa23.17■■□□□ 1.3
UBE2K-201ENST00000261427 USHBP1Q8N6Y0 703 aa23.17■■□□□ 1.3
UBE2K-201ENST00000261427 JAKMIP3Q5VZ66 844 aa23.17■■□□□ 1.3
UBE2K-201ENST00000261427 ZNF444Q8N0Y2 327 aaPredicted RBP23.17■■□□□ 1.3
UBE2K-201ENST00000261427 DNAI2Q9GZS0 605 aa23.17■■□□□ 1.3
UBE2K-201ENST00000261427 FOXO3O43524 673 aa23.17■■□□□ 1.3
UBE2K-201ENST00000261427 LRRFIP2Q9Y608 721 aaKnown RBP23.17■■□□□ 1.3
UBE2K-201ENST00000261427 CETN2P41208 172 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms