RNA–Protein interactions for RNA: ENST00000259803.7

GCM1-201, Transcript of glial cells missing homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCM1, Length 2,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1-201ENST00000259803 MINK1Q8N4C8 1332 aaPredicted RBP13.06□□□□□ -0.32
GCM1-201ENST00000259803 ERBB3P21860 1342 aa13.06□□□□□ -0.32
GCM1-201ENST00000259803 RALGAPBQ86X10 1494 aa13.06□□□□□ -0.32
GCM1-201ENST00000259803 LONRF3Q496Y0 759 aa13.06□□□□□ -0.32
GCM1-201ENST00000259803 TBX22Q9Y458 520 aa13.06□□□□□ -0.32
GCM1-201ENST00000259803 KDM5AP29375 1690 aaKnown RBP13.06□□□□□ -0.32
GCM1-201ENST00000259803 FRAT2O75474 233 aaPredicted RBP13.05□□□□□ -0.32
GCM1-201ENST00000259803 ACRBPQ8NEB7 543 aa13.05□□□□□ -0.32
GCM1-201ENST00000259803 YTHDC2Q9H6S0 1430 aaKnown RBP13.05□□□□□ -0.32
GCM1-201ENST00000259803 KCNV2Q8TDN2 545 aa13.05□□□□□ -0.32
GCM1-201ENST00000259803 PAXBP1Q9Y5B6 917 aa13.05□□□□□ -0.32
GCM1-201ENST00000259803 NINLQ9Y2I6 1382 aa13.04□□□□□ -0.32
GCM1-201ENST00000259803 EIF4G2P78344 907 aaKnown RBP eCLIP13.04□□□□□ -0.32
GCM1-201ENST00000259803 DNAJC21Q5F1R6 531 aaKnown RBP13.04□□□□□ -0.32
GCM1-201ENST00000259803 POGKQ9P215 609 aa13.04□□□□□ -0.32
GCM1-201ENST00000259803 SUFUQ9UMX1 484 aa13.04□□□□□ -0.32
GCM1-201ENST00000259803 MED14O60244 1454 aa13.04□□□□□ -0.32
GCM1-201ENST00000259803 GABPB1Q06547 395 aaPredicted RBP13.03□□□□□ -0.32
GCM1-201ENST00000259803 NEXNQ0ZGT2 675 aa13.03□□□□□ -0.32
GCM1-201ENST00000259803 B4GALNT3Q6L9W6 998 aa13.03□□□□□ -0.32
GCM1-201ENST00000259803 GZF1Q9H116 711 aaPredicted RBP13.03□□□□□ -0.32
GCM1-201ENST00000259803 RANBP17Q9H2T7 1088 aaKnown RBP13.03□□□□□ -0.32
GCM1-201ENST00000259803 SETBP1Q9Y6X0 1596 aa13.03□□□□□ -0.32
GCM1-201ENST00000259803 NOL10Q9BSC4 688 aaKnown RBP13.03□□□□□ -0.32
GCM1-201ENST00000259803 POLR1AO95602 1720 aaPredicted RBP13.03□□□□□ -0.32
GCM1-201ENST00000259803 RPAINQ86UA6 219 aa13.03□□□□□ -0.32
GCM1-201ENST00000259803 CACTIN-AS1Q8N1I8 211 aa13.03□□□□□ -0.32
GCM1-201ENST00000259803 PPFIA4O75335 1185 aa13.02□□□□□ -0.32
GCM1-201ENST00000259803 ERCC4Q92889 916 aaPredicted RBP13.02□□□□□ -0.32
GCM1-201ENST00000259803 RAD50Q92878 1312 aa13.02□□□□□ -0.33
GCM1-201ENST00000259803 SETD1AO15047 1707 aaKnown RBP13.02□□□□□ -0.33
GCM1-201ENST00000259803 PUS10Q3MIT2 529 aaKnown RBP13.02□□□□□ -0.33
GCM1-201ENST00000259803 WDR78Q5VTH9 848 aa13.02□□□□□ -0.33
GCM1-201ENST00000259803 SYNPO2Q9UMS6 1093 aa13.02□□□□□ -0.33
GCM1-201ENST00000259803 MRE11P49959 708 aa13.01□□□□□ -0.33
GCM1-201ENST00000259803 GPRASP1Q5JY77 1395 aa13.01□□□□□ -0.33
GCM1-201ENST00000259803 ABCD1P33897 745 aa13.01□□□□□ -0.33
GCM1-201ENST00000259803 TESK2Q96S53 571 aa13.01□□□□□ -0.33
GCM1-201ENST00000259803 PROSER2Q86WR7 435 aaPredicted RBP13□□□□□ -0.33
GCM1-201ENST00000259803 PHF8Q9UPP1 1060 aa13□□□□□ -0.33
GCM1-201ENST00000259803 KIF4AO95239 1232 aa13□□□□□ -0.33
GCM1-201ENST00000259803 TRDNQ13061 729 aa13□□□□□ -0.33
GCM1-201ENST00000259803 ISY1Q9ULR0 285 aaKnown RBP13□□□□□ -0.33
GCM1-201ENST00000259803 DDX49Q9Y6V7 483 aaKnown RBP13□□□□□ -0.33
GCM1-201ENST00000259803 RIOK3O14730 519 aaKnown RBP12.99□□□□□ -0.33
GCM1-201ENST00000259803 RBM5P52756 815 aaKnown RBP eCLIP12.99□□□□□ -0.33
GCM1-201ENST00000259803 MAF1Q9H063 256 aa12.99□□□□□ -0.33
GCM1-201ENST00000259803 CABP2Q9NPB3 220 aa12.99□□□□□ -0.33
GCM1-201ENST00000259803 DISP3Q9P2K9 1392 aa12.99□□□□□ -0.33
GCM1-201ENST00000259803 CDC37Q16543 378 aaPredicted RBP12.99□□□□□ -0.33
GCM1-201ENST00000259803 R3HCC1Q9Y3T6 440 aaKnown RBP12.99□□□□□ -0.33
GCM1-201ENST00000259803 STRCP1A6NGW2 1772 aa12.99□□□□□ -0.33
GCM1-201ENST00000259803 LRPPRCP42704 1394 aaKnown RBP12.99□□□□□ -0.33
GCM1-201ENST00000259803 H0YHG0 523 aa12.98□□□□□ -0.33
GCM1-201ENST00000259803 SARNPP82979 210 aaKnown RBP12.98□□□□□ -0.33
GCM1-201ENST00000259803 EXOC5O00471 708 aa12.98□□□□□ -0.33
GCM1-201ENST00000259803 PAX3P23760 479 aa12.98□□□□□ -0.33
GCM1-201ENST00000259803 NAP1L1P55209 391 aaKnown RBP12.98□□□□□ -0.33
GCM1-201ENST00000259803 SNRNP27Q8WVK2 155 aaKnown RBP12.98□□□□□ -0.33
GCM1-201ENST00000259803 CXorf56Q9H5V9 222 aa12.98□□□□□ -0.33
GCM1-201ENST00000259803 STK24Q9Y6E0 443 aa12.98□□□□□ -0.33
GCM1-201ENST00000259803 PES1O00541 588 aaKnown RBP12.98□□□□□ -0.33
GCM1-201ENST00000259803 TNNT1P13805 278 aa12.98□□□□□ -0.33
GCM1-201ENST00000259803 RSPH14Q9UHP6 348 aa12.98□□□□□ -0.33
GCM1-201ENST00000259803 TMEM94Q12767 1356 aa12.97□□□□□ -0.33
GCM1-201ENST00000259803 PNMA2Q9UL42 364 aa12.97□□□□□ -0.33
GCM1-201ENST00000259803 ABCC11Q96J66 1382 aa12.97□□□□□ -0.33
GCM1-201ENST00000259803 SMAPO00193 183 aa12.97□□□□□ -0.33
GCM1-201ENST00000259803 KLHL23Q8NBE8 558 aa12.97□□□□□ -0.33
GCM1-201ENST00000259803 ARPC5LQ9BPX5 153 aa12.97□□□□□ -0.33
GCM1-201ENST00000259803 ANKRD33BA6NCL7 494 aa12.96□□□□□ -0.33
GCM1-201ENST00000259803 NAT1P18440 290 aa12.96□□□□□ -0.33
GCM1-201ENST00000259803 ZFYVE27Q5T4F4 411 aa12.96□□□□□ -0.34
GCM1-201ENST00000259803 MAMSTRQ6ZN01 415 aa12.96□□□□□ -0.34
GCM1-201ENST00000259803 ZSCAN30Q86W11 494 aa12.96□□□□□ -0.34
GCM1-201ENST00000259803 TNPO1Q92973 898 aaKnown RBP12.96□□□□□ -0.34
GCM1-201ENST00000259803 CCDC196A0A1B0GTZ2 297 aa12.95□□□□□ -0.34
GCM1-201ENST00000259803 PANK2Q9BZ23 570 aa12.95□□□□□ -0.34
GCM1-201ENST00000259803 TMX4Q9H1E5 349 aaPredicted RBP12.95□□□□□ -0.34
GCM1-201ENST00000259803 SYNRGQ9UMZ2 1314 aa12.95□□□□□ -0.34
GCM1-201ENST00000259803 SRPK2P78362 688 aaKnown RBP12.95□□□□□ -0.34
GCM1-201ENST00000259803 FAM184AQ8NB25 1140 aa12.95□□□□□ -0.34
GCM1-201ENST00000259803 SPATA32Q96LK8 384 aa12.95□□□□□ -0.34
GCM1-201ENST00000259803 UBA5Q9GZZ9 404 aa12.95□□□□□ -0.34
GCM1-201ENST00000259803 HMGN5P82970 282 aaKnown RBP12.94□□□□□ -0.34
GCM1-201ENST00000259803 MFSD4BQ5TF39 518 aa12.94□□□□□ -0.34
GCM1-201ENST00000259803 PEX14O75381 377 aa12.94□□□□□ -0.34
GCM1-201ENST00000259803 TEX13AQ9BXU3 409 aaPredicted RBP12.94□□□□□ -0.34
GCM1-201ENST00000259803 GPBP1L1Q9HC44 474 aaPredicted RBP12.94□□□□□ -0.34
GCM1-201ENST00000259803 ATP2B3Q16720 1220 aa12.93□□□□□ -0.34
GCM1-201ENST00000259803 NUTM2GQ5VZR2 741 aa12.93□□□□□ -0.34
GCM1-201ENST00000259803 CADPS2Q86UW7 1296 aa12.93□□□□□ -0.34
GCM1-201ENST00000259803 DDX17Q92841 729 aaKnown RBP12.93□□□□□ -0.34
GCM1-201ENST00000259803 DMRT2Q9Y5R5 561 aa12.93□□□□□ -0.34
GCM1-201ENST00000259803 SKILP12757 684 aa12.93□□□□□ -0.34
GCM1-201ENST00000259803 DDX10Q13206 875 aaKnown RBP12.93□□□□□ -0.34
GCM1-201ENST00000259803 SASS6Q6UVJ0 657 aa12.93□□□□□ -0.34
GCM1-201ENST00000259803 CCDC91Q7Z6B0 441 aa12.93□□□□□ -0.34
GCM1-201ENST00000259803 CDK19Q9BWU1 502 aa12.93□□□□□ -0.34
GCM1-201ENST00000259803 ARHGEF28Q8N1W1 1705 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms