RNA–Protein interactions for RNA: ENST00000259254.8

GYPC-201, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GYPC, Length 1,246 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-201ENST00000259254 TEFQ10587 303 aa20.31■□□□□ 0.84
GYPC-201ENST00000259254 DCAF5Q96JK2 942 aa20.31■□□□□ 0.84
GYPC-201ENST00000259254 SLFN5Q08AF3 891 aa20.3■□□□□ 0.84
GYPC-201ENST00000259254 SPINK5Q9NQ38 1064 aaPredicted RBP20.3■□□□□ 0.84
GYPC-201ENST00000259254 LRP5O75197 1615 aa20.29■□□□□ 0.84
GYPC-201ENST00000259254 GNAI1P63096 354 aa20.29■□□□□ 0.84
GYPC-201ENST00000259254 MARCH10Q8NA82 808 aaPredicted RBP20.29■□□□□ 0.84
GYPC-201ENST00000259254 IFT57Q9NWB7 429 aa20.29■□□□□ 0.84
GYPC-201ENST00000259254 CEMIPQ8WUJ3 1361 aa20.27■□□□□ 0.84
GYPC-201ENST00000259254 TSR2Q969E8 191 aaKnown RBP20.27■□□□□ 0.84
GYPC-201ENST00000259254 KDM6AO15550 1401 aaPredicted RBP20.27■□□□□ 0.83
GYPC-201ENST00000259254 NHSQ6T4R5 1651 aa20.26■□□□□ 0.83
GYPC-201ENST00000259254 PSDA5PKW4 1024 aaPredicted RBP20.26■□□□□ 0.83
GYPC-201ENST00000259254 NKX1-1Q15270 411 aaPredicted RBP20.26■□□□□ 0.83
GYPC-201ENST00000259254 CFAP44Q96MT7 982 aa20.26■□□□□ 0.83
GYPC-201ENST00000259254 CABP4P57796 275 aa20.25■□□□□ 0.83
GYPC-201ENST00000259254 TAF7Q15545 349 aaPredicted RBP20.25■□□□□ 0.83
GYPC-201ENST00000259254 TSPYL4Q9UJ04 414 aa20.25■□□□□ 0.83
GYPC-201ENST00000259254 FANCIQ9NVI1 1328 aa20.25■□□□□ 0.83
GYPC-201ENST00000259254 DUSP27Q5VZP5 1158 aa20.24■□□□□ 0.83
GYPC-201ENST00000259254 BCL11BQ9C0K0 894 aaPredicted RBP20.24■□□□□ 0.83
GYPC-201ENST00000259254 SLC52A2Q9HAB3 445 aa20.24■□□□□ 0.83
GYPC-201ENST00000259254 MIS18AQ9NYP9 233 aa20.24■□□□□ 0.83
GYPC-201ENST00000259254 DLG5Q8TDM6 1919 aa20.23■□□□□ 0.83
GYPC-201ENST00000259254 ZNF853P0CG23 659 aa20.23■□□□□ 0.83
GYPC-201ENST00000259254 MBIPQ9NS73 344 aa20.23■□□□□ 0.83
GYPC-201ENST00000259254 BTBD11A6QL63 1104 aa20.22■□□□□ 0.83
GYPC-201ENST00000259254 ERVV-2B6SEH9 535 aa20.22■□□□□ 0.83
GYPC-201ENST00000259254 CHL1O00533 1208 aa20.22■□□□□ 0.83
GYPC-201ENST00000259254 R3HDM1Q15032 1099 aaKnown RBP20.22■□□□□ 0.83
GYPC-201ENST00000259254 TRMT2AQ8IZ69 625 aaKnown RBP20.22■□□□□ 0.83
GYPC-201ENST00000259254 NFATC2IPQ8NCF5 419 aa20.21■□□□□ 0.83
GYPC-201ENST00000259254 SHANK3Q9BYB0 1731 aa20.21■□□□□ 0.83
GYPC-201ENST00000259254 PLSCR1O15162 318 aa20.2■□□□□ 0.82
GYPC-201ENST00000259254 PTF1AQ7RTS3 328 aa20.2■□□□□ 0.82
GYPC-201ENST00000259254 SYTL4Q96C24 671 aaPredicted RBP20.2■□□□□ 0.82
GYPC-201ENST00000259254 BABAM1Q9NWV8 329 aa20.2■□□□□ 0.82
GYPC-201ENST00000259254 TMOD3Q9NYL9 352 aa20.2■□□□□ 0.82
GYPC-201ENST00000259254 EXOSC9Q06265 439 aaKnown RBP20.19■□□□□ 0.82
GYPC-201ENST00000259254 SRCAPQ6ZRS2 3230 aa20.19■□□□□ 0.82
GYPC-201ENST00000259254 BTAF1O14981 1849 aa20.18■□□□□ 0.82
GYPC-201ENST00000259254 ACSBG1Q96GR2 724 aa20.18■□□□□ 0.82
GYPC-201ENST00000259254 MRC1P22897 1456 aa20.18■□□□□ 0.82
GYPC-201ENST00000259254 ADAMTS7Q9UKP4 1686 aa20.17■□□□□ 0.82
GYPC-201ENST00000259254 KAT6BQ8WYB5 2073 aa20.16■□□□□ 0.82
GYPC-201ENST00000259254 PRIM1P49642 420 aaKnown RBP20.16■□□□□ 0.82
GYPC-201ENST00000259254 NBPF14Q5TI25 921 aa20.16■□□□□ 0.82
GYPC-201ENST00000259254 TTC5Q8N0Z6 440 aa20.16■□□□□ 0.82
GYPC-201ENST00000259254 SLC39A6Q13433 755 aa20.15■□□□□ 0.82
GYPC-201ENST00000259254 DOT1LQ8TEK3 1739 aa20.14■□□□□ 0.81
GYPC-201ENST00000259254 ELL2O00472 640 aaPredicted RBP20.14■□□□□ 0.81
GYPC-201ENST00000259254 KCNQ3O43525 872 aa20.14■□□□□ 0.81
GYPC-201ENST00000259254 KCNQ2O43526 872 aa20.13■□□□□ 0.81
GYPC-201ENST00000259254 ZNF790Q6PG37 636 aa20.13■□□□□ 0.81
GYPC-201ENST00000259254 PIGBQ92521 554 aa20.13■□□□□ 0.81
GYPC-201ENST00000259254 SCN11AQ9UI33 1791 aa20.13■□□□□ 0.81
GYPC-201ENST00000259254 KRT24Q2M2I5 525 aa20.12■□□□□ 0.81
GYPC-201ENST00000259254 TWISTNBQ3B726 338 aaPredicted RBP20.12■□□□□ 0.81
GYPC-201ENST00000259254 C8orf58Q8NAV2 365 aa20.12■□□□□ 0.81
GYPC-201ENST00000259254 EIF4A1P60842 406 aaKnown RBP20.11■□□□□ 0.81
GYPC-201ENST00000259254 PROM2Q8N271 834 aa20.11■□□□□ 0.81
GYPC-201ENST00000259254 RCAN3Q9UKA8 241 aa20.11■□□□□ 0.81
GYPC-201ENST00000259254 TOGARAM1Q9Y4F4 1720 aa20.1■□□□□ 0.81
GYPC-201ENST00000259254 TSPYL6Q8N831 410 aa20.1■□□□□ 0.81
GYPC-201ENST00000259254 CASZ1Q86V15 1759 aa20.1■□□□□ 0.81
GYPC-201ENST00000259254 CT47B1P0C2W7 299 aaPredicted RBP20.09■□□□□ 0.81
GYPC-201ENST00000259254 TXNRD1Q16881 649 aa20.08■□□□□ 0.81
GYPC-201ENST00000259254 FMNL2Q96PY5 1086 aa20.08■□□□□ 0.81
GYPC-201ENST00000259254 ANO8Q9HCE9 1232 aaPredicted RBP20.08■□□□□ 0.81
GYPC-201ENST00000259254 ASAP1Q9ULH1 1129 aa20.08■□□□□ 0.81
GYPC-201ENST00000259254 PAPPAQ13219 1627 aa20.08■□□□□ 0.8
GYPC-201ENST00000259254 PTCD1O75127 700 aaKnown RBP20.07■□□□□ 0.8
GYPC-201ENST00000259254 ZNF496Q96IT1 587 aaPredicted RBP20.07■□□□□ 0.8
GYPC-201ENST00000259254 ATG3Q9NT62 314 aa20.07■□□□□ 0.8
GYPC-201ENST00000259254 VAMP4O75379 141 aa20.06■□□□□ 0.8
GYPC-201ENST00000259254 RBM42Q9BTD8 480 aaKnown RBP20.06■□□□□ 0.8
GYPC-201ENST00000259254 SIPA1L3O60292 1781 aaPredicted RBP20.05■□□□□ 0.8
GYPC-201ENST00000259254 LY75O60449 1722 aa20.05■□□□□ 0.8
GYPC-201ENST00000259254 SOS1Q07889 1333 aaPredicted RBP20.04■□□□□ 0.8
GYPC-201ENST00000259254 KDM3BQ7LBC6 1761 aa20.04■□□□□ 0.8
GYPC-201ENST00000259254 TCERG1O14776 1098 aaKnown RBP20.04■□□□□ 0.8
GYPC-201ENST00000259254 SMARCC1Q92922 1105 aaPredicted RBP20.04■□□□□ 0.8
GYPC-201ENST00000259254 ZNF428Q96B54 188 aa20.04■□□□□ 0.8
GYPC-201ENST00000259254 BCL2L13Q9BXK5 485 aa20.04■□□□□ 0.8
GYPC-201ENST00000259254 GIGYF1O75420 1035 aaPredicted RBP20.03■□□□□ 0.8
GYPC-201ENST00000259254 HOXB7P09629 217 aa20.03■□□□□ 0.8
GYPC-201ENST00000259254 SNRPA1P09661 255 aaKnown RBP20.03■□□□□ 0.8
GYPC-201ENST00000259254 EIF2S2P20042 333 aaKnown RBP20.03■□□□□ 0.8
GYPC-201ENST00000259254 RARSP54136 660 aaKnown RBP20.03■□□□□ 0.8
GYPC-201ENST00000259254 HDGFL1Q5TGJ6 251 aa20.03■□□□□ 0.8
GYPC-201ENST00000259254 NECTIN2Q92692 538 aa20.03■□□□□ 0.8
GYPC-201ENST00000259254 SMC4Q9NTJ3 1288 aa20.03■□□□□ 0.8
GYPC-201ENST00000259254 CHMP4AQ9BY43 222 aa20.02■□□□□ 0.8
GYPC-201ENST00000259254 SUPT16HQ9Y5B9 1047 aaKnown RBP20.02■□□□□ 0.8
GYPC-201ENST00000259254 HEG1Q9ULI3 1381 aa20.02■□□□□ 0.8
GYPC-201ENST00000259254 PALLDQ8WX93 1383 aa20.01■□□□□ 0.79
GYPC-201ENST00000259254 CCDC30Q5VVM6 783 aa20.01■□□□□ 0.79
GYPC-201ENST00000259254 SSH1Q8WYL5 1049 aa20.01■□□□□ 0.79
GYPC-201ENST00000259254 STK32BQ9NY57 414 aa20.01■□□□□ 0.79
GYPC-201ENST00000259254 VIRMAQ69YN4 1812 aaKnown RBP20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms