RNA–Protein interactions for RNA: ENST00000257414.12

SEMA6A-201, Transcript of semaphorin 6A, humanhuman

TSL 1 (best) BASIC

Gene SEMA6A, Length 4,256 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-201ENST00000257414 RIC3Q7Z5B4 369 aa12.08□□□□□ -0.48
SEMA6A-201ENST00000257414 UBE2Q2Q8WVN8 375 aa12.08□□□□□ -0.48
SEMA6A-201ENST00000257414 ZNF530Q6P9A1 599 aaPredicted RBP12.07□□□□□ -0.48
SEMA6A-201ENST00000257414 RAB11FIP3O75154 756 aa12.07□□□□□ -0.48
SEMA6A-201ENST00000257414 SPC24Q8NBT2 197 aa12.07□□□□□ -0.48
SEMA6A-201ENST00000257414 PDRG1Q9NUG6 133 aa12.07□□□□□ -0.48
SEMA6A-201ENST00000257414 PDCP20941 246 aa12.07□□□□□ -0.48
SEMA6A-201ENST00000257414 FOSBP53539 338 aa12.07□□□□□ -0.48
SEMA6A-201ENST00000257414 GNL2Q13823 731 aaKnown RBP12.07□□□□□ -0.48
SEMA6A-201ENST00000257414 SASS6Q6UVJ0 657 aa12.07□□□□□ -0.48
SEMA6A-201ENST00000257414 G2E3Q7L622 706 aa12.07□□□□□ -0.48
SEMA6A-201ENST00000257414 ERC1Q8IUD2 1116 aa12.07□□□□□ -0.48
SEMA6A-201ENST00000257414 USHBP1Q8N6Y0 703 aa12.07□□□□□ -0.48
SEMA6A-201ENST00000257414 QRICH2Q9H0J4 1663 aa12.07□□□□□ -0.48
SEMA6A-201ENST00000257414 SF3A1Q15459 793 aaKnown RBP12.06□□□□□ -0.48
SEMA6A-201ENST00000257414 MTERF4Q7Z6M4 381 aaKnown RBP12.06□□□□□ -0.48
SEMA6A-201ENST00000257414 CCDC83Q8IWF9 413 aa12.06□□□□□ -0.48
SEMA6A-201ENST00000257414 MTHFSDQ2M296 383 aaKnown RBP12.06□□□□□ -0.48
SEMA6A-201ENST00000257414 DDX54Q8TDD1 881 aaKnown RBP12.06□□□□□ -0.48
SEMA6A-201ENST00000257414 CHL1O00533 1208 aa12.06□□□□□ -0.48
SEMA6A-201ENST00000257414 AACSQ86V21 672 aa12.06□□□□□ -0.48
SEMA6A-201ENST00000257414 GLRX3O76003 335 aaKnown RBP12.06□□□□□ -0.48
SEMA6A-201ENST00000257414 PLEKHO1Q53GL0 409 aaPredicted RBP12.06□□□□□ -0.48
SEMA6A-201ENST00000257414 LARP1BQ659C4 914 aaKnown RBP12.06□□□□□ -0.48
SEMA6A-201ENST00000257414 PPP1R42Q7Z4L9 355 aa12.06□□□□□ -0.48
SEMA6A-201ENST00000257414 SIL1Q9H173 461 aa12.06□□□□□ -0.48
SEMA6A-201ENST00000257414 USP25Q9UHP3 1055 aa12.06□□□□□ -0.48
SEMA6A-201ENST00000257414 PPP6R1Q9UPN7 881 aa12.06□□□□□ -0.48
SEMA6A-201ENST00000257414 CCDC183Q5T5S1 534 aa12.05□□□□□ -0.48
SEMA6A-201ENST00000257414 SIRT2Q8IXJ6 389 aa12.05□□□□□ -0.48
SEMA6A-201ENST00000257414 SPG7Q9UQ90 795 aa12.05□□□□□ -0.48
SEMA6A-201ENST00000257414 BRPF1P55201 1214 aaPredicted RBP12.05□□□□□ -0.48
SEMA6A-201ENST00000257414 KRT85P78386 507 aa12.05□□□□□ -0.48
SEMA6A-201ENST00000257414 HMGN5P82970 282 aaKnown RBP12.05□□□□□ -0.48
SEMA6A-201ENST00000257414 HIP1O00291 1037 aa12.05□□□□□ -0.48
SEMA6A-201ENST00000257414 CCDC192P0DO97 292 aa12.05□□□□□ -0.48
SEMA6A-201ENST00000257414 ATP8B2P98198 1209 aa12.05□□□□□ -0.48
SEMA6A-201ENST00000257414 PRPF40BQ6NWY9 871 aaKnown RBP12.05□□□□□ -0.48
SEMA6A-201ENST00000257414 ZNF592Q92610 1267 aa12.05□□□□□ -0.48
SEMA6A-201ENST00000257414 RBSNQ9H1K0 784 aa12.05□□□□□ -0.48
SEMA6A-201ENST00000257414 LIMCH1Q9UPQ0 1083 aa12.05□□□□□ -0.48
SEMA6A-201ENST00000257414 ANAPC15P60006 121 aa12.04□□□□□ -0.48
SEMA6A-201ENST00000257414 STK3Q13188 491 aa12.04□□□□□ -0.48
SEMA6A-201ENST00000257414 ADGRB3O60242 1522 aa12.04□□□□□ -0.48
SEMA6A-201ENST00000257414 GLI2P10070 1586 aa12.04□□□□□ -0.48
SEMA6A-201ENST00000257414 FERMT3Q86UX7 667 aa12.04□□□□□ -0.48
SEMA6A-201ENST00000257414 ZSCAN31Q96LW9 406 aaPredicted RBP12.04□□□□□ -0.48
SEMA6A-201ENST00000257414 TTC5Q8N0Z6 440 aa12.04□□□□□ -0.48
SEMA6A-201ENST00000257414 TRIM5Q9C035 493 aa12.04□□□□□ -0.48
SEMA6A-201ENST00000257414 MLH3Q9UHC1 1453 aa12.04□□□□□ -0.48
SEMA6A-201ENST00000257414 IQSEC2Q5JU85 1478 aa12.03□□□□□ -0.48
SEMA6A-201ENST00000257414 BTBD11A6QL63 1104 aa12.03□□□□□ -0.48
SEMA6A-201ENST00000257414 LMBRD1Q9NUN5 540 aa12.03□□□□□ -0.48
SEMA6A-201ENST00000257414 AMOTL2Q9Y2J4 779 aa12.03□□□□□ -0.48
SEMA6A-201ENST00000257414 SETBP1Q9Y6X0 1596 aa12.03□□□□□ -0.48
SEMA6A-201ENST00000257414 TPM3P06753 285 aa12.03□□□□□ -0.48
SEMA6A-201ENST00000257414 TPM4P67936 248 aa12.03□□□□□ -0.48
SEMA6A-201ENST00000257414 PKP1Q13835 747 aa12.03□□□□□ -0.48
SEMA6A-201ENST00000257414 BLOC1S2Q6QNY1 142 aa12.03□□□□□ -0.48
SEMA6A-201ENST00000257414 DNAAF4Q8WXU2 420 aa12.03□□□□□ -0.48
SEMA6A-201ENST00000257414 KIAA1210Q9ULL0 1709 aa12.03□□□□□ -0.48
SEMA6A-201ENST00000257414 CHMLP26374 656 aa12.03□□□□□ -0.48
SEMA6A-201ENST00000257414 ZNF445P59923 1031 aa12.03□□□□□ -0.48
SEMA6A-201ENST00000257414 TAF7LQ5H9L4 462 aa12.03□□□□□ -0.48
SEMA6A-201ENST00000257414 RHPN1Q8TCX5 695 aa12.03□□□□□ -0.48
SEMA6A-201ENST00000257414 PIK3R4Q99570 1358 aa12.03□□□□□ -0.48
SEMA6A-201ENST00000257414 ABCC3O15438 1527 aa12.03□□□□□ -0.48
SEMA6A-201ENST00000257414 STX6O43752 255 aa12.02□□□□□ -0.48
SEMA6A-201ENST00000257414 MCM5P33992 734 aa12.02□□□□□ -0.48
SEMA6A-201ENST00000257414 ZKSCAN5Q9Y2L8 839 aa12.02□□□□□ -0.48
SEMA6A-201ENST00000257414 CCDC73Q6ZRK6 1079 aa12.02□□□□□ -0.49
SEMA6A-201ENST00000257414 PDCL3Q9H2J4 239 aa12.02□□□□□ -0.49
SEMA6A-201ENST00000257414 RTL1A6NKG5 1358 aa12.02□□□□□ -0.49
SEMA6A-201ENST00000257414 KIF24Q5T7B8 1368 aa12.02□□□□□ -0.49
SEMA6A-201ENST00000257414 FAM135BQ49AJ0 1406 aa12.02□□□□□ -0.49
SEMA6A-201ENST00000257414 ESCO1Q5FWF5 840 aa12.02□□□□□ -0.49
SEMA6A-201ENST00000257414 RAPGEF4Q8WZA2 1011 aa12.02□□□□□ -0.49
SEMA6A-201ENST00000257414 FBXW7Q969H0 707 aa12.02□□□□□ -0.49
SEMA6A-201ENST00000257414 DNAJC2Q99543 621 aaKnown RBP12.02□□□□□ -0.49
SEMA6A-201ENST00000257414 OFD1O75665 1012 aa12.01□□□□□ -0.49
SEMA6A-201ENST00000257414 ANXA1P04083 346 aa12.01□□□□□ -0.49
SEMA6A-201ENST00000257414 USP48Q86UV5 1035 aa12.01□□□□□ -0.49
SEMA6A-201ENST00000257414 TNMDQ9H2S6 317 aa12.01□□□□□ -0.49
SEMA6A-201ENST00000257414 MAP3K19Q56UN5 1328 aa12.01□□□□□ -0.49
SEMA6A-201ENST00000257414 PI4KAP2A4QPH2 592 aa12.01□□□□□ -0.49
SEMA6A-201ENST00000257414 ZNF853P0CG23 659 aa12.01□□□□□ -0.49
SEMA6A-201ENST00000257414 TRHP20396 242 aaPredicted RBP12.01□□□□□ -0.49
SEMA6A-201ENST00000257414 PI4KAP1Q8N8J0 262 aa12.01□□□□□ -0.49
SEMA6A-201ENST00000257414 NEUROD6Q96NK8 337 aa12.01□□□□□ -0.49
SEMA6A-201ENST00000257414 TULP4Q9NRJ4 1543 aa12.01□□□□□ -0.49
SEMA6A-201ENST00000257414 HCLS1P14317 486 aaPredicted RBP12.01□□□□□ -0.49
SEMA6A-201ENST00000257414 ANKRD1Q15327 319 aa12.01□□□□□ -0.49
SEMA6A-201ENST00000257414 NUP62CLQ9H1M0 184 aa12.01□□□□□ -0.49
SEMA6A-201ENST00000257414 PPRC1Q5VV67 1664 aaKnown RBP12.01□□□□□ -0.49
SEMA6A-201ENST00000257414 YEATS2Q9ULM3 1422 aa12.01□□□□□ -0.49
SEMA6A-201ENST00000257414 CEBPZQ03701 1054 aaKnown RBP12□□□□□ -0.49
SEMA6A-201ENST00000257414 HS1BP3Q53T59 392 aa12□□□□□ -0.49
SEMA6A-201ENST00000257414 CNPY2Q9Y2B0 182 aa12□□□□□ -0.49
SEMA6A-201ENST00000257414 THEMISQ8N1K5 641 aaPredicted RBP12□□□□□ -0.49
SEMA6A-201ENST00000257414 EYA1Q99502 592 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms