RNA–Protein interactions for RNA: ENST00000255622.10

PDE6B-201, Transcript of phosphodiesterase 6B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDE6B, Length 3,280 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-201ENST00000255622 FAM43BQ6ZT52 329 aaPredicted RBP13.89□□□□□ -0.19
PDE6B-201ENST00000255622 PLEKHG3A1L390 1219 aa13.89□□□□□ -0.19
PDE6B-201ENST00000255622 F6X3S4 739 aa13.89□□□□□ -0.19
PDE6B-201ENST00000255622 CCDC9Q9Y3X0 531 aaKnown RBP13.89□□□□□ -0.19
PDE6B-201ENST00000255622 ESPNB1AK53 854 aa13.88□□□□□ -0.19
PDE6B-201ENST00000255622 G2E3Q7L622 706 aa13.88□□□□□ -0.19
PDE6B-201ENST00000255622 ANKRD44Q8N8A2 993 aa13.88□□□□□ -0.19
PDE6B-201ENST00000255622 RGPD1P0DJD0 1748 aa13.88□□□□□ -0.19
PDE6B-201ENST00000255622 CRB1P82279 1406 aa13.88□□□□□ -0.19
PDE6B-201ENST00000255622 XRCC6P12956 609 aaKnown RBP eCLIP13.88□□□□□ -0.19
PDE6B-201ENST00000255622 SLC4A10Q6U841 1118 aa13.88□□□□□ -0.19
PDE6B-201ENST00000255622 MAP7D2Q96T17 732 aa13.88□□□□□ -0.19
PDE6B-201ENST00000255622 RTL1A6NKG5 1358 aa13.88□□□□□ -0.19
PDE6B-201ENST00000255622 NALCNQ8IZF0 1738 aa13.88□□□□□ -0.19
PDE6B-201ENST00000255622 TTC22Q5TAA0 569 aa13.88□□□□□ -0.19
PDE6B-201ENST00000255622 GOLGA6L3A6NEY3 463 aa13.87□□□□□ -0.19
PDE6B-201ENST00000255622 NUTM2GQ5VZR2 741 aa13.87□□□□□ -0.19
PDE6B-201ENST00000255622 GAS2L2Q8NHY3 880 aa13.87□□□□□ -0.19
PDE6B-201ENST00000255622 TRIM44Q96DX7 344 aaPredicted RBP13.87□□□□□ -0.19
PDE6B-201ENST00000255622 AMOTL2Q9Y2J4 779 aa13.86□□□□□ -0.19
PDE6B-201ENST00000255622 KIF24Q5T7B8 1368 aa13.86□□□□□ -0.19
PDE6B-201ENST00000255622 PLEKHG1Q9ULL1 1385 aa13.86□□□□□ -0.19
PDE6B-201ENST00000255622 K7ELQ4 463 aaPredicted RBP13.86□□□□□ -0.19
PDE6B-201ENST00000255622 TSPYL4Q9UJ04 414 aa13.86□□□□□ -0.19
PDE6B-201ENST00000255622 USP31Q70CQ4 1352 aa13.86□□□□□ -0.19
PDE6B-201ENST00000255622 FSD2A1L4K1 749 aa13.86□□□□□ -0.19
PDE6B-201ENST00000255622 UTP14CQ5TAP6 766 aaKnown RBP13.86□□□□□ -0.19
PDE6B-201ENST00000255622 KIAA0232Q92628 1395 aa13.86□□□□□ -0.19
PDE6B-201ENST00000255622 RGPD8O14715 1765 aaPredicted RBP13.85□□□□□ -0.19
PDE6B-201ENST00000255622 NECTIN2Q92692 538 aa13.85□□□□□ -0.19
PDE6B-201ENST00000255622 CEP170BQ9Y4F5 1589 aaPredicted RBP13.85□□□□□ -0.19
PDE6B-201ENST00000255622 SSH2Q76I76 1423 aa13.85□□□□□ -0.19
PDE6B-201ENST00000255622 CLGNO14967 610 aa13.84□□□□□ -0.19
PDE6B-201ENST00000255622 SDSP20132 328 aa13.84□□□□□ -0.19
PDE6B-201ENST00000255622 RAB3GAP1Q15042 981 aa13.84□□□□□ -0.19
PDE6B-201ENST00000255622 NGDNQ8NEJ9 315 aaKnown RBP13.84□□□□□ -0.19
PDE6B-201ENST00000255622 EYA1Q99502 592 aa13.84□□□□□ -0.19
PDE6B-201ENST00000255622 PTPRCP08575 1304 aa13.84□□□□□ -0.19
PDE6B-201ENST00000255622 RTF1Q92541 710 aaKnown RBP13.84□□□□□ -0.19
PDE6B-201ENST00000255622 DDX11L8A8MPP1 907 aa13.84□□□□□ -0.19
PDE6B-201ENST00000255622 AMPHP49418 695 aa13.84□□□□□ -0.19
PDE6B-201ENST00000255622 RPAP2Q8IXW5 612 aaPredicted RBP13.84□□□□□ -0.19
PDE6B-201ENST00000255622 FMN2Q9NZ56 1722 aa13.84□□□□□ -0.19
PDE6B-201ENST00000255622 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.83□□□□□ -0.2
PDE6B-201ENST00000255622 TSHZ3Q63HK5 1081 aa13.83□□□□□ -0.2
PDE6B-201ENST00000255622 SSFA2P28290 1259 aa13.83□□□□□ -0.2
PDE6B-201ENST00000255622 ARHGEF10O15013 1369 aa13.83□□□□□ -0.2
PDE6B-201ENST00000255622 AK9Q5TCS8 1911 aa13.82□□□□□ -0.2
PDE6B-201ENST00000255622 FLT4P35916 1363 aa13.82□□□□□ -0.2
PDE6B-201ENST00000255622 USP26Q9BXU7 913 aa13.82□□□□□ -0.2
PDE6B-201ENST00000255622 ZSCAN20P17040 1043 aaPredicted RBP13.81□□□□□ -0.2
PDE6B-201ENST00000255622 EID1Q9Y6B2 187 aa13.81□□□□□ -0.2
PDE6B-201ENST00000255622 SBNO1A3KN83 1393 aa13.81□□□□□ -0.2
PDE6B-201ENST00000255622 LTV1Q96GA3 475 aaPredicted RBP13.81□□□□□ -0.2
PDE6B-201ENST00000255622 EXOC6BQ9Y2D4 811 aa13.81□□□□□ -0.2
PDE6B-201ENST00000255622 IGSF3O75054 1194 aa13.81□□□□□ -0.2
PDE6B-201ENST00000255622 CIZ1Q9ULV3 898 aaPredicted RBP13.81□□□□□ -0.2
PDE6B-201ENST00000255622 NLRP6P59044 892 aa13.8□□□□□ -0.2
PDE6B-201ENST00000255622 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.8□□□□□ -0.2
PDE6B-201ENST00000255622 PIK3C2AO00443 1686 aa13.8□□□□□ -0.2
PDE6B-201ENST00000255622 DIP2AQ14689 1571 aa13.8□□□□□ -0.2
PDE6B-201ENST00000255622 PTMAP06454 111 aaKnown RBP13.8□□□□□ -0.2
PDE6B-201ENST00000255622 TTC21AQ8NDW8 1320 aa13.79□□□□□ -0.2
PDE6B-201ENST00000255622 KIF20AO95235 890 aa13.79□□□□□ -0.2
PDE6B-201ENST00000255622 ZNF592Q92610 1267 aa13.79□□□□□ -0.2
PDE6B-201ENST00000255622 GBP4Q96PP9 640 aa13.79□□□□□ -0.2
PDE6B-201ENST00000255622 KDRP35968 1356 aa13.79□□□□□ -0.2
PDE6B-201ENST00000255622 IGSF1Q8N6C5 1336 aa13.79□□□□□ -0.2
PDE6B-201ENST00000255622 R3HCC1Q9Y3T6 440 aaKnown RBP13.79□□□□□ -0.2
PDE6B-201ENST00000255622 ERBB4Q15303 1308 aa13.79□□□□□ -0.2
PDE6B-201ENST00000255622 CBX1P83916 185 aa13.78□□□□□ -0.2
PDE6B-201ENST00000255622 PKP1Q13835 747 aa13.78□□□□□ -0.2
PDE6B-201ENST00000255622 GAS2L3Q86XJ1 694 aa13.78□□□□□ -0.2
PDE6B-201ENST00000255622 USHBP1Q8N6Y0 703 aa13.78□□□□□ -0.2
PDE6B-201ENST00000255622 FKBP5Q13451 457 aaPredicted RBP13.77□□□□□ -0.2
PDE6B-201ENST00000255622 RABEP1Q15276 862 aa13.77□□□□□ -0.2
PDE6B-201ENST00000255622 PNMA6EA0A0J9YXQ4 647 aa13.77□□□□□ -0.21
PDE6B-201ENST00000255622 GRPEL1Q9HAV7 217 aa13.77□□□□□ -0.21
PDE6B-201ENST00000255622 FLIIQ13045 1269 aa13.77□□□□□ -0.21
PDE6B-201ENST00000255622 CCT4P50991 539 aaKnown RBP13.76□□□□□ -0.21
PDE6B-201ENST00000255622 PDE1AP54750 535 aa13.76□□□□□ -0.21
PDE6B-201ENST00000255622 EP400NLQ6ZTU2 488 aa13.76□□□□□ -0.21
PDE6B-201ENST00000255622 RBM33Q96EV2 1170 aaKnown RBP13.76□□□□□ -0.21
PDE6B-201ENST00000255622 STK31Q9BXU1 1019 aa13.76□□□□□ -0.21
PDE6B-201ENST00000255622 HMMRO75330 724 aa13.76□□□□□ -0.21
PDE6B-201ENST00000255622 HOXC9P31274 260 aa13.76□□□□□ -0.21
PDE6B-201ENST00000255622 KCNJ4P48050 445 aa13.76□□□□□ -0.21
PDE6B-201ENST00000255622 GNAI2P04899 355 aa13.75□□□□□ -0.21
PDE6B-201ENST00000255622 PRR29P0C7W0 189 aa13.75□□□□□ -0.21
PDE6B-201ENST00000255622 KCNA6P17658 529 aa13.75□□□□□ -0.21
PDE6B-201ENST00000255622 MRE11P49959 708 aa13.75□□□□□ -0.21
PDE6B-201ENST00000255622 ZGPATQ8N5A5 531 aaKnown RBP13.75□□□□□ -0.21
PDE6B-201ENST00000255622 IL17REQ8NFR9 667 aa13.75□□□□□ -0.21
PDE6B-201ENST00000255622 GNAT3A8MTJ3 354 aa13.75□□□□□ -0.21
PDE6B-201ENST00000255622 CASC1Q6TDU7 716 aa13.75□□□□□ -0.21
PDE6B-201ENST00000255622 ZNF526Q8TF50 670 aaPredicted RBP13.75□□□□□ -0.21
PDE6B-201ENST00000255622 PTMSP20962 102 aa13.75□□□□□ -0.21
PDE6B-201ENST00000255622 FBXO3Q9UK99 471 aa13.75□□□□□ -0.21
PDE6B-201ENST00000255622 TBX22Q9Y458 520 aa13.75□□□□□ -0.21
PDE6B-201ENST00000255622 LETM1O95202 739 aaPredicted RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms