RNA–Protein interactions for RNA: ENST00000255304.8

USPL1-201, Transcript of ubiquitin specific peptidase like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USPL1, Length 3,814 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1-201ENST00000255304 AKAP12Q02952 1782 aa9.27□□□□□ -0.93
USPL1-201ENST00000255304 NUTM2BA6NNL0 878 aaPredicted RBP9.27□□□□□ -0.93
USPL1-201ENST00000255304 NUTM2EB1AL46 878 aaPredicted RBP9.27□□□□□ -0.93
USPL1-201ENST00000255304 NUTM2AQ8IVF1 878 aaPredicted RBP9.27□□□□□ -0.93
USPL1-201ENST00000255304 RGPD2P0DJD1 1756 aa9.27□□□□□ -0.93
USPL1-201ENST00000255304 DIP2AQ14689 1571 aa9.26□□□□□ -0.93
USPL1-201ENST00000255304 A0A1W2PP64 1363 aa9.26□□□□□ -0.93
USPL1-201ENST00000255304 NEK4P51957 841 aa9.26□□□□□ -0.93
USPL1-201ENST00000255304 NEXNQ0ZGT2 675 aa9.26□□□□□ -0.93
USPL1-201ENST00000255304 CCDC27Q2M243 656 aa9.26□□□□□ -0.93
USPL1-201ENST00000255304 NUTM1Q86Y26 1132 aa9.26□□□□□ -0.93
USPL1-201ENST00000255304 CABLES1Q8TDN4 633 aa9.26□□□□□ -0.93
USPL1-201ENST00000255304 RBM42Q9BTD8 480 aaKnown RBP9.26□□□□□ -0.93
USPL1-201ENST00000255304 MAP2P11137 1827 aaKnown RBP9.26□□□□□ -0.93
USPL1-201ENST00000255304 VPS37CA5D8V6 355 aaPredicted RBP9.26□□□□□ -0.93
USPL1-201ENST00000255304 CDK11BP21127 795 aaKnown RBP9.26□□□□□ -0.93
USPL1-201ENST00000255304 MCTP1Q6DN14 999 aa9.26□□□□□ -0.93
USPL1-201ENST00000255304 WDR63Q8IWG1 891 aa9.26□□□□□ -0.93
USPL1-201ENST00000255304 UPF3BQ9BZI7 483 aaKnown RBP9.26□□□□□ -0.93
USPL1-201ENST00000255304 PEAK1Q9H792 1746 aa9.26□□□□□ -0.93
USPL1-201ENST00000255304 TECPR2O15040 1411 aa9.26□□□□□ -0.93
USPL1-201ENST00000255304 ACEP12821 1306 aa9.26□□□□□ -0.93
USPL1-201ENST00000255304 FCHSD2O94868 740 aa9.26□□□□□ -0.93
USPL1-201ENST00000255304 DRC7Q8IY82 874 aa9.26□□□□□ -0.93
USPL1-201ENST00000255304 RGPD5Q99666 1765 aa9.25□□□□□ -0.93
USPL1-201ENST00000255304 SHPRHQ149N8 1683 aa9.25□□□□□ -0.93
USPL1-201ENST00000255304 ORAI2Q96SN7 254 aa9.25□□□□□ -0.93
USPL1-201ENST00000255304 FMN2Q9NZ56 1722 aa9.25□□□□□ -0.93
USPL1-201ENST00000255304 GNL2Q13823 731 aaKnown RBP9.25□□□□□ -0.93
USPL1-201ENST00000255304 CHMP4AQ9BY43 222 aa9.25□□□□□ -0.93
USPL1-201ENST00000255304 NPHP4O75161 1426 aaPredicted RBP9.25□□□□□ -0.93
USPL1-201ENST00000255304 PIK3C2AO00443 1686 aa9.25□□□□□ -0.93
USPL1-201ENST00000255304 LRPPRCP42704 1394 aaKnown RBP9.25□□□□□ -0.93
USPL1-201ENST00000255304 ZBTB22O15209 634 aa9.25□□□□□ -0.93
USPL1-201ENST00000255304 CHD1LQ86WJ1 897 aa9.25□□□□□ -0.93
USPL1-201ENST00000255304 C8orf58Q8NAV2 365 aa9.25□□□□□ -0.93
USPL1-201ENST00000255304 DNAJC2Q99543 621 aaKnown RBP9.25□□□□□ -0.93
USPL1-201ENST00000255304 MBIPQ9NS73 344 aa9.25□□□□□ -0.93
USPL1-201ENST00000255304 PRDM4Q9UKN5 801 aa9.25□□□□□ -0.93
USPL1-201ENST00000255304 MON2Q7Z3U7 1717 aa9.24□□□□□ -0.93
USPL1-201ENST00000255304 SRGAP3O43295 1099 aa9.24□□□□□ -0.93
USPL1-201ENST00000255304 APPP05067 770 aa9.24□□□□□ -0.93
USPL1-201ENST00000255304 LRRC59Q96AG4 307 aaKnown RBP9.24□□□□□ -0.93
USPL1-201ENST00000255304 ATAD2Q6PL18 1390 aa9.24□□□□□ -0.93
USPL1-201ENST00000255304 RPGRIP1LQ68CZ1 1315 aa9.24□□□□□ -0.93
USPL1-201ENST00000255304 G3BP1Q13283 466 aaKnown RBP eCLIP9.24□□□□□ -0.93
USPL1-201ENST00000255304 CAVIN1Q6NZI2 390 aaKnown RBP9.24□□□□□ -0.93
USPL1-201ENST00000255304 TOM1L2Q6ZVM7 507 aa9.24□□□□□ -0.93
USPL1-201ENST00000255304 POLKQ9UBT6 870 aa9.24□□□□□ -0.93
USPL1-201ENST00000255304 MTMR7Q9Y216 660 aa9.24□□□□□ -0.93
USPL1-201ENST00000255304 ABCC11Q96J66 1382 aa9.24□□□□□ -0.93
USPL1-201ENST00000255304 KDM2BQ8NHM5 1336 aa9.23□□□□□ -0.93
USPL1-201ENST00000255304 ANKLE2Q86XL3 938 aa9.23□□□□□ -0.93
USPL1-201ENST00000255304 CREBRFQ8IUR6 639 aa9.23□□□□□ -0.93
USPL1-201ENST00000255304 C16orf71Q8IYS4 520 aaPredicted RBP9.23□□□□□ -0.93
USPL1-201ENST00000255304 TRERF1Q96PN7 1200 aa9.23□□□□□ -0.93
USPL1-201ENST00000255304 USP19O94966 1318 aa9.23□□□□□ -0.93
USPL1-201ENST00000255304 GPATCH3Q96I76 525 aa9.23□□□□□ -0.93
USPL1-201ENST00000255304 PRDM11Q9NQV5 511 aa9.23□□□□□ -0.93
USPL1-201ENST00000255304 NWD1Q149M9 1564 aa9.23□□□□□ -0.93
USPL1-201ENST00000255304 GAS2L2Q8NHY3 880 aa9.23□□□□□ -0.93
USPL1-201ENST00000255304 ZNF692Q9BU19 519 aaPredicted RBP9.23□□□□□ -0.93
USPL1-201ENST00000255304 PIP4K2BP78356 416 aa9.22□□□□□ -0.93
USPL1-201ENST00000255304 CCDC30Q5VVM6 783 aa9.22□□□□□ -0.93
USPL1-201ENST00000255304 PARD3Q8TEW0 1356 aa9.22□□□□□ -0.93
USPL1-201ENST00000255304 STK3Q13188 491 aa9.22□□□□□ -0.93
USPL1-201ENST00000255304 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.22□□□□□ -0.93
USPL1-201ENST00000255304 TNPO1Q92973 898 aaKnown RBP9.22□□□□□ -0.93
USPL1-201ENST00000255304 CHAMP1Q96JM3 812 aa9.22□□□□□ -0.93
USPL1-201ENST00000255304 SBNO2Q9Y2G9 1366 aa9.22□□□□□ -0.93
USPL1-201ENST00000255304 REC8O95072 547 aa9.22□□□□□ -0.93
USPL1-201ENST00000255304 SLC39A6Q13433 755 aa9.22□□□□□ -0.93
USPL1-201ENST00000255304 PAXIP1Q6ZW49 1069 aaPredicted RBP9.22□□□□□ -0.93
USPL1-201ENST00000255304 ZSCAN30Q86W11 494 aa9.22□□□□□ -0.93
USPL1-201ENST00000255304 ZNF830Q96NB3 372 aaPredicted RBP9.22□□□□□ -0.93
USPL1-201ENST00000255304 FSD2A1L4K1 749 aa9.21□□□□□ -0.93
USPL1-201ENST00000255304 BTBD11A6QL63 1104 aa9.21□□□□□ -0.93
USPL1-201ENST00000255304 DDX11L8A8MPP1 907 aa9.21□□□□□ -0.93
USPL1-201ENST00000255304 CDC45O75419 566 aa9.21□□□□□ -0.93
USPL1-201ENST00000255304 MEIS3Q99687 375 aa9.21□□□□□ -0.93
USPL1-201ENST00000255304 CGNQ9P2M7 1197 aaKnown RBP9.21□□□□□ -0.93
USPL1-201ENST00000255304 LTBP4Q8N2S1 1624 aa9.21□□□□□ -0.93
USPL1-201ENST00000255304 CEBPZQ03701 1054 aaKnown RBP9.21□□□□□ -0.94
USPL1-201ENST00000255304 TAF7Q15545 349 aaPredicted RBP9.21□□□□□ -0.94
USPL1-201ENST00000255304 INTS3Q68E01 1043 aaKnown RBP9.21□□□□□ -0.94
USPL1-201ENST00000255304 CWC27Q6UX04 472 aaKnown RBP9.21□□□□□ -0.94
USPL1-201ENST00000255304 ADGRB2O60241 1585 aa9.21□□□□□ -0.94
USPL1-201ENST00000255304 GNAI2P04899 355 aa9.21□□□□□ -0.94
USPL1-201ENST00000255304 FSD1Q9BTV5 496 aa9.2□□□□□ -0.94
USPL1-201ENST00000255304 ANTXR1Q9H6X2 564 aa9.2□□□□□ -0.94
USPL1-201ENST00000255304 LRRC7Q96NW7 1537 aa9.2□□□□□ -0.94
USPL1-201ENST00000255304 ZNF771Q7L3S4 317 aaPredicted RBP9.2□□□□□ -0.94
USPL1-201ENST00000255304 CLASRPQ8N2M8 674 aaKnown RBP9.2□□□□□ -0.94
USPL1-201ENST00000255304 RBM27Q9P2N5 1060 aaKnown RBP9.2□□□□□ -0.94
USPL1-201ENST00000255304 PHF8Q9UPP1 1060 aa9.2□□□□□ -0.94
USPL1-201ENST00000255304 KIF20BQ96Q89 1820 aa9.2□□□□□ -0.94
USPL1-201ENST00000255304 ATP5J2-PTCD1G3V325 749 aa9.2□□□□□ -0.94
USPL1-201ENST00000255304 SSFA2P28290 1259 aa9.2□□□□□ -0.94
USPL1-201ENST00000255304 WASHC4Q2M389 1173 aa9.2□□□□□ -0.94
USPL1-201ENST00000255304 LRRFIP2Q9Y608 721 aaKnown RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms