RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 MAP4K4O95819 1239 aaPredicted RBP14.63□□□□□ -0.07
LIN28A-201ENST00000254231 RWDD1Q9H446 243 aaPredicted RBP14.63□□□□□ -0.07
LIN28A-201ENST00000254231 IL1RAPL2Q9NP60 686 aa14.63□□□□□ -0.07
LIN28A-201ENST00000254231 AMOTQ4VCS5 1084 aa14.62□□□□□ -0.07
LIN28A-201ENST00000254231 TMOD3Q9NYL9 352 aa14.62□□□□□ -0.07
LIN28A-201ENST00000254231 PHF14O94880 888 aa14.62□□□□□ -0.07
LIN28A-201ENST00000254231 DAXXQ9UER7 740 aaPredicted RBP14.62□□□□□ -0.07
LIN28A-201ENST00000254231 ANKARQ7Z5J8 1434 aa14.62□□□□□ -0.07
LIN28A-201ENST00000254231 C16orf71Q8IYS4 520 aaPredicted RBP14.61□□□□□ -0.07
LIN28A-201ENST00000254231 PHKG2P15735 406 aa14.61□□□□□ -0.07
LIN28A-201ENST00000254231 COPS6Q7L5N1 327 aa14.61□□□□□ -0.07
LIN28A-201ENST00000254231 KCNQ2O43526 872 aa14.61□□□□□ -0.07
LIN28A-201ENST00000254231 PDE3AQ14432 1141 aa14.61□□□□□ -0.07
LIN28A-201ENST00000254231 USP19O94966 1318 aa14.61□□□□□ -0.07
LIN28A-201ENST00000254231 NBR1Q14596 966 aa14.6□□□□□ -0.07
LIN28A-201ENST00000254231 DDB1Q16531 1140 aa14.6□□□□□ -0.07
LIN28A-201ENST00000254231 USP31Q70CQ4 1352 aa14.6□□□□□ -0.07
LIN28A-201ENST00000254231 ZNF790Q6PG37 636 aa14.6□□□□□ -0.07
LIN28A-201ENST00000254231 TBC1D2BQ9UPU7 963 aa14.6□□□□□ -0.07
LIN28A-201ENST00000254231 API5Q9BZZ5 524 aaKnown RBP14.6□□□□□ -0.07
LIN28A-201ENST00000254231 MAP3K2Q9Y2U5 619 aa14.6□□□□□ -0.07
LIN28A-201ENST00000254231 KLHL34Q8N239 644 aa14.59□□□□□ -0.07
LIN28A-201ENST00000254231 XAGE3Q8WTP9 111 aa14.59□□□□□ -0.07
LIN28A-201ENST00000254231 KLHDC4Q8TBB5 520 aa14.59□□□□□ -0.07
LIN28A-201ENST00000254231 MYD88Q99836 296 aa14.59□□□□□ -0.07
LIN28A-201ENST00000254231 CDK12Q9NYV4 1490 aaPredicted RBP14.59□□□□□ -0.07
LIN28A-201ENST00000254231 PDE4AP27815 886 aa14.58□□□□□ -0.07
LIN28A-201ENST00000254231 MFAP1P55081 439 aaKnown RBP14.58□□□□□ -0.07
LIN28A-201ENST00000254231 PTF1AQ7RTS3 328 aa14.58□□□□□ -0.08
LIN28A-201ENST00000254231 LRRFIP2Q9Y608 721 aaKnown RBP14.58□□□□□ -0.08
LIN28A-201ENST00000254231 EIF4A1P60842 406 aaKnown RBP14.58□□□□□ -0.08
LIN28A-201ENST00000254231 SETD1AO15047 1707 aaKnown RBP14.58□□□□□ -0.08
LIN28A-201ENST00000254231 USP21Q9UK80 565 aa14.57□□□□□ -0.08
LIN28A-201ENST00000254231 SSH2Q76I76 1423 aa14.57□□□□□ -0.08
LIN28A-201ENST00000254231 CENPQQ7L2Z9 268 aaPredicted RBP14.57□□□□□ -0.08
LIN28A-201ENST00000254231 UBTFL1P0CB47 393 aaPredicted RBP14.57□□□□□ -0.08
LIN28A-201ENST00000254231 MS4A1P11836 297 aa14.57□□□□□ -0.08
LIN28A-201ENST00000254231 NALCNQ8IZF0 1738 aa14.57□□□□□ -0.08
LIN28A-201ENST00000254231 TNS3Q68CZ2 1445 aa14.56□□□□□ -0.08
LIN28A-201ENST00000254231 ARHGEF10O15013 1369 aa14.56□□□□□ -0.08
LIN28A-201ENST00000254231 NBPF7P0C2Y1 421 aaPredicted RBP14.56□□□□□ -0.08
LIN28A-201ENST00000254231 GTF2E1P29083 439 aaPredicted RBP14.56□□□□□ -0.08
LIN28A-201ENST00000254231 NOL8Q76FK4 1167 aaKnown RBP14.56□□□□□ -0.08
LIN28A-201ENST00000254231 DNAJC10Q8IXB1 793 aa14.56□□□□□ -0.08
LIN28A-201ENST00000254231 SOS2Q07890 1332 aaPredicted RBP14.56□□□□□ -0.08
LIN28A-201ENST00000254231 WDR17Q8IZU2 1322 aa14.56□□□□□ -0.08
LIN28A-201ENST00000254231 USP32Q8NFA0 1604 aa14.56□□□□□ -0.08
LIN28A-201ENST00000254231 SURF6O75683 361 aaKnown RBP14.56□□□□□ -0.08
LIN28A-201ENST00000254231 ZNF853P0CG23 659 aa14.56□□□□□ -0.08
LIN28A-201ENST00000254231 SLC52A2Q9HAB3 445 aa14.56□□□□□ -0.08
LIN28A-201ENST00000254231 FOXD4L1Q9NU39 408 aa14.56□□□□□ -0.08
LIN28A-201ENST00000254231 ANP32AP39687 249 aaKnown RBP14.55□□□□□ -0.08
LIN28A-201ENST00000254231 OTUD7AQ8TE49 926 aaPredicted RBP14.55□□□□□ -0.08
LIN28A-201ENST00000254231 COL3A1P02461 1466 aaPredicted RBP14.55□□□□□ -0.08
LIN28A-201ENST00000254231 DTNBO60941 627 aa14.55□□□□□ -0.08
LIN28A-201ENST00000254231 PPP1R1BQ9UD71 204 aaPredicted RBP14.55□□□□□ -0.08
LIN28A-201ENST00000254231 PA2G4Q9UQ80 394 aaKnown RBP14.55□□□□□ -0.08
LIN28A-201ENST00000254231 TRIM6-TRIM34B2RNG4 842 aa14.54□□□□□ -0.08
LIN28A-201ENST00000254231 ITSN1Q15811 1721 aa14.54□□□□□ -0.08
LIN28A-201ENST00000254231 SRGAP3O43295 1099 aa14.54□□□□□ -0.08
LIN28A-201ENST00000254231 RILPL2Q969X0 211 aa14.54□□□□□ -0.08
LIN28A-201ENST00000254231 SRCIN1Q9C0H9 1055 aa14.54□□□□□ -0.08
LIN28A-201ENST00000254231 RNF123Q5XPI4 1314 aa14.54□□□□□ -0.08
LIN28A-201ENST00000254231 GIGYF1O75420 1035 aaPredicted RBP14.53□□□□□ -0.08
LIN28A-201ENST00000254231 TTLL7Q6ZT98 887 aa14.53□□□□□ -0.08
LIN28A-201ENST00000254231 IL16Q14005 1332 aa14.53□□□□□ -0.08
LIN28A-201ENST00000254231 UBE3BQ7Z3V4 1068 aa14.53□□□□□ -0.08
LIN28A-201ENST00000254231 CERKQ8TCT0 537 aa14.53□□□□□ -0.08
LIN28A-201ENST00000254231 DCAF5Q96JK2 942 aa14.53□□□□□ -0.08
LIN28A-201ENST00000254231 NUTM1Q86Y26 1132 aa14.53□□□□□ -0.08
LIN28A-201ENST00000254231 FMNL2Q96PY5 1086 aa14.53□□□□□ -0.08
LIN28A-201ENST00000254231 CHD2O14647 1828 aaKnown RBP14.52□□□□□ -0.08
LIN28A-201ENST00000254231 NEXNQ0ZGT2 675 aa14.52□□□□□ -0.09
LIN28A-201ENST00000254231 FAM161AQ3B820 660 aa14.52□□□□□ -0.09
LIN28A-201ENST00000254231 ALDH1L2Q3SY69 923 aa14.52□□□□□ -0.09
LIN28A-201ENST00000254231 ERICH6BQ5W0A0 696 aa14.52□□□□□ -0.09
LIN28A-201ENST00000254231 PIGBQ92521 554 aa14.52□□□□□ -0.09
LIN28A-201ENST00000254231 ZBTB7BO15156 539 aaPredicted RBP14.51□□□□□ -0.09
LIN28A-201ENST00000254231 DNAAF4Q8WXU2 420 aa14.51□□□□□ -0.09
LIN28A-201ENST00000254231 DBF4Q9UBU7 674 aaPredicted RBP14.51□□□□□ -0.09
LIN28A-201ENST00000254231 ATP6V1AP38606 617 aa14.51□□□□□ -0.09
LIN28A-201ENST00000254231 SYNE4Q8N205 404 aa14.51□□□□□ -0.09
LIN28A-201ENST00000254231 PNMA6EA0A0J9YXQ4 647 aa14.5□□□□□ -0.09
LIN28A-201ENST00000254231 ZNF219Q9P2Y4 722 aaPredicted RBP14.5□□□□□ -0.09
LIN28A-201ENST00000254231 PXDNQ92626 1479 aa14.5□□□□□ -0.09
LIN28A-201ENST00000254231 ZBTB40Q9NUA8 1239 aa14.5□□□□□ -0.09
LIN28A-201ENST00000254231 SNRPA1P09661 255 aaKnown RBP14.5□□□□□ -0.09
LIN28A-201ENST00000254231 NDUFB9Q9Y6M9 179 aa14.5□□□□□ -0.09
LIN28A-201ENST00000254231 SEC24BO95487 1268 aa14.49□□□□□ -0.09
LIN28A-201ENST00000254231 A0A087WZG4 1122 aa14.49□□□□□ -0.09
LIN28A-201ENST00000254231 ANKRD13DQ6ZTN6 518 aa14.49□□□□□ -0.09
LIN28A-201ENST00000254231 CARD10Q9BWT7 1032 aa14.49□□□□□ -0.09
LIN28A-201ENST00000254231 PIK3C2AO00443 1686 aa14.48□□□□□ -0.09
LIN28A-201ENST00000254231 KIF20BQ96Q89 1820 aa14.48□□□□□ -0.09
LIN28A-201ENST00000254231 GNAI2P04899 355 aa14.48□□□□□ -0.09
LIN28A-201ENST00000254231 CHMP4CQ96CF2 233 aa14.48□□□□□ -0.09
LIN28A-201ENST00000254231 MEGF6O75095 1541 aa14.48□□□□□ -0.09
LIN28A-201ENST00000254231 PPP1R42Q7Z4L9 355 aa14.47□□□□□ -0.09
LIN28A-201ENST00000254231 FAM89AQ96GI7 184 aa14.47□□□□□ -0.09
LIN28A-201ENST00000254231 XRN1Q8IZH2 1706 aaKnown RBP14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms