RNA–Protein interactions for RNA: ENST00000248151.4

TUBBP1-201, Transcript of tubulin beta pseudogene 1, humanhuman

BASIC

Gene TUBBP1, Length 1,335 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBBP1-201ENST00000248151 FAM9BQ8IZU0 186 aa14.7□□□□□ -0.06
TUBBP1-201ENST00000248151 RUNDC1Q96C34 613 aa14.7□□□□□ -0.06
TUBBP1-201ENST00000248151 THUMPD2Q9BTF0 503 aaKnown RBP14.7□□□□□ -0.06
TUBBP1-201ENST00000248151 SLC52A2Q9HAB3 445 aa14.7□□□□□ -0.06
TUBBP1-201ENST00000248151 LY75O60449 1722 aa14.7□□□□□ -0.06
TUBBP1-201ENST00000248151 NUP188Q5SRE5 1749 aa14.7□□□□□ -0.06
TUBBP1-201ENST00000248151 PSDA5PKW4 1024 aaPredicted RBP14.69□□□□□ -0.06
TUBBP1-201ENST00000248151 TMPOP42166 694 aaKnown RBP14.69□□□□□ -0.06
TUBBP1-201ENST00000248151 RIPK4P57078 832 aa14.69□□□□□ -0.06
TUBBP1-201ENST00000248151 RTF1Q92541 710 aaKnown RBP14.69□□□□□ -0.06
TUBBP1-201ENST00000248151 RBM42Q9BTD8 480 aaKnown RBP14.69□□□□□ -0.06
TUBBP1-201ENST00000248151 RREB1Q92766 1687 aa14.69□□□□□ -0.06
TUBBP1-201ENST00000248151 PTCD1O75127 700 aaKnown RBP14.68□□□□□ -0.06
TUBBP1-201ENST00000248151 CCNL1Q9UK58 526 aaPredicted RBP14.68□□□□□ -0.06
TUBBP1-201ENST00000248151 PALLDQ8WX93 1383 aa14.68□□□□□ -0.06
TUBBP1-201ENST00000248151 APAF1O14727 1248 aa14.67□□□□□ -0.06
TUBBP1-201ENST00000248151 TEFQ10587 303 aa14.67□□□□□ -0.06
TUBBP1-201ENST00000248151 R3HDM1Q15032 1099 aaKnown RBP14.67□□□□□ -0.06
TUBBP1-201ENST00000248151 MIS18AQ9NYP9 233 aa14.67□□□□□ -0.06
TUBBP1-201ENST00000248151 ADAMTS7Q9UKP4 1686 aa14.67□□□□□ -0.06
TUBBP1-201ENST00000248151 RGPD3A6NKT7 1758 aaPredicted RBP14.67□□□□□ -0.06
TUBBP1-201ENST00000248151 SIPA1L3O60292 1781 aaPredicted RBP14.67□□□□□ -0.06
TUBBP1-201ENST00000248151 RGPD4Q7Z3J3 1758 aa14.67□□□□□ -0.06
TUBBP1-201ENST00000248151 KCNQ3O43525 872 aa14.66□□□□□ -0.06
TUBBP1-201ENST00000248151 SMARCC1Q92922 1105 aaPredicted RBP14.66□□□□□ -0.06
TUBBP1-201ENST00000248151 ANO8Q9HCE9 1232 aaPredicted RBP14.66□□□□□ -0.06
TUBBP1-201ENST00000248151 TAF1LQ8IZX4 1826 aa14.66□□□□□ -0.06
TUBBP1-201ENST00000248151 LOC102724428A0A0B4J2F2 783 aa14.66□□□□□ -0.06
TUBBP1-201ENST00000248151 SIK1P57059 783 aa14.66□□□□□ -0.06
TUBBP1-201ENST00000248151 SLC4A9Q96Q91 983 aa14.66□□□□□ -0.06
TUBBP1-201ENST00000248151 HTATSF1O43719 755 aaKnown RBP14.65□□□□□ -0.06
TUBBP1-201ENST00000248151 ATP6V1AP38606 617 aa14.65□□□□□ -0.06
TUBBP1-201ENST00000248151 NBPF14Q5TI25 921 aa14.65□□□□□ -0.06
TUBBP1-201ENST00000248151 SMIM5Q71RC9 77 aa14.65□□□□□ -0.06
TUBBP1-201ENST00000248151 SALL2Q9Y467 1007 aaPredicted RBP14.65□□□□□ -0.06
TUBBP1-201ENST00000248151 BTBD11A6QL63 1104 aa14.64□□□□□ -0.07
TUBBP1-201ENST00000248151 ITPK1Q13572 414 aa14.64□□□□□ -0.07
TUBBP1-201ENST00000248151 SLC27A3Q5K4L6 730 aa14.64□□□□□ -0.07
TUBBP1-201ENST00000248151 TRIM35Q9UPQ4 493 aa14.64□□□□□ -0.07
TUBBP1-201ENST00000248151 CEMIPQ8WUJ3 1361 aa14.63□□□□□ -0.07
TUBBP1-201ENST00000248151 TAF7Q15545 349 aaPredicted RBP14.63□□□□□ -0.07
TUBBP1-201ENST00000248151 ZNF827Q17R98 1081 aa14.63□□□□□ -0.07
TUBBP1-201ENST00000248151 PDGFDQ9GZP0 370 aaPredicted RBP14.63□□□□□ -0.07
TUBBP1-201ENST00000248151 SLC15A2Q16348 729 aa14.62□□□□□ -0.07
TUBBP1-201ENST00000248151 LINC00116Q8NCU8 138 aa14.62□□□□□ -0.07
TUBBP1-201ENST00000248151 STK32BQ9NY57 414 aa14.62□□□□□ -0.07
TUBBP1-201ENST00000248151 C5P01031 1676 aa14.61□□□□□ -0.07
TUBBP1-201ENST00000248151 ZNF790Q6PG37 636 aa14.61□□□□□ -0.07
TUBBP1-201ENST00000248151 AKT1S1Q96B36 256 aa14.61□□□□□ -0.07
TUBBP1-201ENST00000248151 LAS1LQ9Y4W2 734 aaKnown RBP14.61□□□□□ -0.07
TUBBP1-201ENST00000248151 MRC1P22897 1456 aa14.61□□□□□ -0.07
TUBBP1-201ENST00000248151 MYH14Q7Z406 1995 aaKnown RBP14.6□□□□□ -0.07
TUBBP1-201ENST00000248151 TUBGCP6Q96RT7 1819 aa14.6□□□□□ -0.07
TUBBP1-201ENST00000248151 CCER2I3L3R5 266 aa14.6□□□□□ -0.07
TUBBP1-201ENST00000248151 DNAJC10Q8IXB1 793 aa14.6□□□□□ -0.07
TUBBP1-201ENST00000248151 TTC5Q8N0Z6 440 aa14.6□□□□□ -0.07
TUBBP1-201ENST00000248151 ZNF496Q96IT1 587 aaPredicted RBP14.6□□□□□ -0.07
TUBBP1-201ENST00000248151 PAPPAQ13219 1627 aa14.59□□□□□ -0.07
TUBBP1-201ENST00000248151 AMIGO3Q86WK7 504 aa14.59□□□□□ -0.07
TUBBP1-201ENST00000248151 TFCP2L1Q9NZI6 479 aa14.59□□□□□ -0.07
TUBBP1-201ENST00000248151 PRAMEF22A3QJZ6 481 aa14.58□□□□□ -0.08
TUBBP1-201ENST00000248151 UBR2Q8IWV8 1755 aa14.58□□□□□ -0.08
TUBBP1-201ENST00000248151 C4BP0C0L5 1744 aa14.57□□□□□ -0.08
TUBBP1-201ENST00000248151 KCPQ6ZWJ8 1503 aa14.57□□□□□ -0.08
TUBBP1-201ENST00000248151 LMOD3Q0VAK6 560 aa14.57□□□□□ -0.08
TUBBP1-201ENST00000248151 TJP1Q07157 1748 aa14.57□□□□□ -0.08
TUBBP1-201ENST00000248151 MSH5O43196 834 aa14.56□□□□□ -0.08
TUBBP1-201ENST00000248151 PHF14O94880 888 aa14.56□□□□□ -0.08
TUBBP1-201ENST00000248151 AK7Q96M32 723 aa14.56□□□□□ -0.08
TUBBP1-201ENST00000248151 USP16Q9Y5T5 823 aa14.56□□□□□ -0.08
TUBBP1-201ENST00000248151 UBR3Q6ZT12 1888 aa14.55□□□□□ -0.08
TUBBP1-201ENST00000248151 COL5A3P25940 1745 aaPredicted RBP14.55□□□□□ -0.08
TUBBP1-201ENST00000248151 COL23A1Q86Y22 540 aaPredicted RBP14.55□□□□□ -0.08
TUBBP1-201ENST00000248151 FMNL2Q96PY5 1086 aa14.55□□□□□ -0.08
TUBBP1-201ENST00000248151 TSPYL4Q9UJ04 414 aa14.55□□□□□ -0.08
TUBBP1-201ENST00000248151 PNPLA7Q6ZV29 1317 aa14.55□□□□□ -0.08
TUBBP1-201ENST00000248151 KDM3BQ7LBC6 1761 aa14.54□□□□□ -0.08
TUBBP1-201ENST00000248151 GNPATO15228 680 aa14.54□□□□□ -0.08
TUBBP1-201ENST00000248151 ZBTB7AO95365 584 aa14.54□□□□□ -0.08
TUBBP1-201ENST00000248151 CYP19A1P11511 503 aaPredicted RBP14.54□□□□□ -0.08
TUBBP1-201ENST00000248151 CRKLP46109 303 aaKnown RBP14.54□□□□□ -0.08
TUBBP1-201ENST00000248151 INTS5Q6P9B9 1019 aaKnown RBP14.54□□□□□ -0.08
TUBBP1-201ENST00000248151 ATF5Q9Y2D1 282 aaPredicted RBP14.54□□□□□ -0.08
TUBBP1-201ENST00000248151 HEG1Q9ULI3 1381 aa14.54□□□□□ -0.08
TUBBP1-201ENST00000248151 ZNF831Q5JPB2 1677 aa14.53□□□□□ -0.08
TUBBP1-201ENST00000248151 PIP4K2AP48426 406 aaPredicted RBP14.53□□□□□ -0.08
TUBBP1-201ENST00000248151 EIF4A1P60842 406 aaKnown RBP14.53□□□□□ -0.08
TUBBP1-201ENST00000248151 KRT24Q2M2I5 525 aa14.53□□□□□ -0.08
TUBBP1-201ENST00000248151 WWC1Q8IX03 1113 aa14.53□□□□□ -0.08
TUBBP1-201ENST00000248151 CHL1O00533 1208 aa14.52□□□□□ -0.08
TUBBP1-201ENST00000248151 A1BGP04217 495 aa14.52□□□□□ -0.08
TUBBP1-201ENST00000248151 CANXP27824 592 aaKnown RBP14.52□□□□□ -0.08
TUBBP1-201ENST00000248151 VSIG10Q8N0Z9 540 aa14.52□□□□□ -0.08
TUBBP1-201ENST00000248151 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.51□□□□□ -0.09
TUBBP1-201ENST00000248151 SNRPA1P09661 255 aaKnown RBP14.51□□□□□ -0.09
TUBBP1-201ENST00000248151 RC3H1Q5TC82 1133 aaKnown RBP14.51□□□□□ -0.09
TUBBP1-201ENST00000248151 MBIPQ9NS73 344 aa14.51□□□□□ -0.09
TUBBP1-201ENST00000248151 CASZ1Q86V15 1759 aa14.51□□□□□ -0.09
TUBBP1-201ENST00000248151 QSER1Q2KHR3 1735 aa14.5□□□□□ -0.09
TUBBP1-201ENST00000248151 RPS6KA4O75676 772 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms