RNA–Protein interactions for RNA: ENST00000243662.10

RAB38-201, Transcript of RAB38, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB38, Length 1,465 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38-201ENST00000243662 HTATSF1O43719 755 aaKnown RBP20.55■□□□□ 0.88
RAB38-201ENST00000243662 TMPOP42166 694 aaKnown RBP20.55■□□□□ 0.88
RAB38-201ENST00000243662 TMOD3Q9NYL9 352 aa20.55■□□□□ 0.88
RAB38-201ENST00000243662 EZH2Q15910 746 aaKnown RBP20.54■□□□□ 0.88
RAB38-201ENST00000243662 SLC52A2Q9HAB3 445 aa20.54■□□□□ 0.88
RAB38-201ENST00000243662 CABP4P57796 275 aa20.53■□□□□ 0.88
RAB38-201ENST00000243662 PROM2Q8N271 834 aa20.52■□□□□ 0.88
RAB38-201ENST00000243662 NFATC2IPQ8NCF5 419 aa20.52■□□□□ 0.88
RAB38-201ENST00000243662 ZNF831Q5JPB2 1677 aa20.52■□□□□ 0.87
RAB38-201ENST00000243662 UBR2Q8IWV8 1755 aa20.51■□□□□ 0.87
RAB38-201ENST00000243662 TAF1LQ8IZX4 1826 aa20.51■□□□□ 0.87
RAB38-201ENST00000243662 MCM10Q7L590 875 aa20.5■□□□□ 0.87
RAB38-201ENST00000243662 ASAP1Q9ULH1 1129 aa20.5■□□□□ 0.87
RAB38-201ENST00000243662 PALLDQ8WX93 1383 aa20.5■□□□□ 0.87
RAB38-201ENST00000243662 APAF1O14727 1248 aa20.5■□□□□ 0.87
RAB38-201ENST00000243662 RIPK4P57078 832 aa20.5■□□□□ 0.87
RAB38-201ENST00000243662 DCTN1Q14203 1278 aa20.5■□□□□ 0.87
RAB38-201ENST00000243662 RTF1Q92541 710 aaKnown RBP20.5■□□□□ 0.87
RAB38-201ENST00000243662 ATG3Q9NT62 314 aa20.5■□□□□ 0.87
RAB38-201ENST00000243662 TXNRD1Q16881 649 aa20.49■□□□□ 0.87
RAB38-201ENST00000243662 FAM9BQ8IZU0 186 aa20.49■□□□□ 0.87
RAB38-201ENST00000243662 SMARCC1Q92922 1105 aaPredicted RBP20.49■□□□□ 0.87
RAB38-201ENST00000243662 RRP7AQ9Y3A4 280 aaKnown RBP20.49■□□□□ 0.87
RAB38-201ENST00000243662 CICQ96RK0 1608 aaPredicted RBP20.48■□□□□ 0.87
RAB38-201ENST00000243662 TRIM35Q9UPQ4 493 aa20.48■□□□□ 0.87
RAB38-201ENST00000243662 KDM3BQ7LBC6 1761 aa20.47■□□□□ 0.87
RAB38-201ENST00000243662 TEFQ10587 303 aa20.47■□□□□ 0.87
RAB38-201ENST00000243662 C5P01031 1676 aa20.46■□□□□ 0.87
RAB38-201ENST00000243662 LRRC4BQ9NT99 713 aa20.46■□□□□ 0.87
RAB38-201ENST00000243662 KCPQ6ZWJ8 1503 aa20.46■□□□□ 0.87
RAB38-201ENST00000243662 LMOD3Q0VAK6 560 aa20.45■□□□□ 0.86
RAB38-201ENST00000243662 NEUROD2Q15784 382 aa20.45■□□□□ 0.86
RAB38-201ENST00000243662 THUMPD2Q9BTF0 503 aaKnown RBP20.45■□□□□ 0.86
RAB38-201ENST00000243662 SLC27A3Q5K4L6 730 aa20.44■□□□□ 0.86
RAB38-201ENST00000243662 COL5A3P25940 1745 aaPredicted RBP20.44■□□□□ 0.86
RAB38-201ENST00000243662 TJP1Q07157 1748 aa20.44■□□□□ 0.86
RAB38-201ENST00000243662 SLC39A6Q13433 755 aa20.43■□□□□ 0.86
RAB38-201ENST00000243662 NCBP3Q53F19 620 aaKnown RBP20.43■□□□□ 0.86
RAB38-201ENST00000243662 LOC102724428A0A0B4J2F2 783 aa20.42■□□□□ 0.86
RAB38-201ENST00000243662 SIK1P57059 783 aa20.42■□□□□ 0.86
RAB38-201ENST00000243662 SLC4A9Q96Q91 983 aa20.42■□□□□ 0.86
RAB38-201ENST00000243662 CCNL1Q9UK58 526 aaPredicted RBP20.42■□□□□ 0.86
RAB38-201ENST00000243662 KCNQ4P56696 695 aa20.41■□□□□ 0.86
RAB38-201ENST00000243662 TAF7Q15545 349 aaPredicted RBP20.41■□□□□ 0.86
RAB38-201ENST00000243662 TUBGCP6Q96RT7 1819 aa20.41■□□□□ 0.86
RAB38-201ENST00000243662 ZNF790Q6PG37 636 aa20.4■□□□□ 0.86
RAB38-201ENST00000243662 C4BP0C0L5 1744 aa20.39■□□□□ 0.86
RAB38-201ENST00000243662 QSER1Q2KHR3 1735 aa20.39■□□□□ 0.86
RAB38-201ENST00000243662 BTBD11A6QL63 1104 aa20.39■□□□□ 0.85
RAB38-201ENST00000243662 CCDC27Q2M243 656 aa20.39■□□□□ 0.85
RAB38-201ENST00000243662 SUPT16HQ9Y5B9 1047 aaKnown RBP20.39■□□□□ 0.85
RAB38-201ENST00000243662 ANO8Q9HCE9 1232 aaPredicted RBP20.38■□□□□ 0.85
RAB38-201ENST00000243662 MYH14Q7Z406 1995 aaKnown RBP20.38■□□□□ 0.85
RAB38-201ENST00000243662 KCNQ3O43525 872 aa20.37■□□□□ 0.85
RAB38-201ENST00000243662 PTCD1O75127 700 aaKnown RBP20.37■□□□□ 0.85
RAB38-201ENST00000243662 ITPK1Q13572 414 aa20.37■□□□□ 0.85
RAB38-201ENST00000243662 RBM42Q9BTD8 480 aaKnown RBP20.37■□□□□ 0.85
RAB38-201ENST00000243662 UBR3Q6ZT12 1888 aa20.37■□□□□ 0.85
RAB38-201ENST00000243662 SENP3-EIF4A1A0A087X0R7 540 aa20.36■□□□□ 0.85
RAB38-201ENST00000243662 ATP6V1AP38606 617 aa20.36■□□□□ 0.85
RAB38-201ENST00000243662 TTC5Q8N0Z6 440 aa20.36■□□□□ 0.85
RAB38-201ENST00000243662 ZNF496Q96IT1 587 aaPredicted RBP20.36■□□□□ 0.85
RAB38-201ENST00000243662 BABAM1Q9NWV8 329 aa20.36■□□□□ 0.85
RAB38-201ENST00000243662 WWC1Q8IX03 1113 aa20.35■□□□□ 0.85
RAB38-201ENST00000243662 VSIG10Q8N0Z9 540 aa20.35■□□□□ 0.85
RAB38-201ENST00000243662 AKT1S1Q96B36 256 aa20.35■□□□□ 0.85
RAB38-201ENST00000243662 MIS18AQ9NYP9 233 aa20.35■□□□□ 0.85
RAB38-201ENST00000243662 HEG1Q9ULI3 1381 aa20.34■□□□□ 0.85
RAB38-201ENST00000243662 NGEFQ8N5V2 710 aa20.34■□□□□ 0.85
RAB38-201ENST00000243662 LINC00116Q8NCU8 138 aa20.34■□□□□ 0.85
RAB38-201ENST00000243662 CHL1O00533 1208 aa20.33■□□□□ 0.85
RAB38-201ENST00000243662 ZNF827Q17R98 1081 aa20.33■□□□□ 0.85
RAB38-201ENST00000243662 NBPF14Q5TI25 921 aa20.33■□□□□ 0.85
RAB38-201ENST00000243662 LAMB4A4D0S4 1761 aa20.33■□□□□ 0.84
RAB38-201ENST00000243662 ZNF853P0CG23 659 aa20.32■□□□□ 0.84
RAB38-201ENST00000243662 HMGB2P26583 209 aaKnown RBP20.32■□□□□ 0.84
RAB38-201ENST00000243662 SLC15A2Q16348 729 aa20.32■□□□□ 0.84
RAB38-201ENST00000243662 FMNL2Q96PY5 1086 aa20.32■□□□□ 0.84
RAB38-201ENST00000243662 CASZ1Q86V15 1759 aa20.32■□□□□ 0.84
RAB38-201ENST00000243662 CFAP44Q96MT7 982 aa20.31■□□□□ 0.84
RAB38-201ENST00000243662 EIF4A1P60842 406 aaKnown RBP20.3■□□□□ 0.84
RAB38-201ENST00000243662 CALD1Q05682 793 aaKnown RBP20.3■□□□□ 0.84
RAB38-201ENST00000243662 DNAJC10Q8IXB1 793 aa20.3■□□□□ 0.84
RAB38-201ENST00000243662 STK32BQ9NY57 414 aa20.3■□□□□ 0.84
RAB38-201ENST00000243662 TSPYL4Q9UJ04 414 aa20.3■□□□□ 0.84
RAB38-201ENST00000243662 IFT57Q9NWB7 429 aa20.3■□□□□ 0.84
RAB38-201ENST00000243662 ZNF521Q96K83 1311 aa20.3■□□□□ 0.84
RAB38-201ENST00000243662 CNTNAP4Q9C0A0 1308 aa20.3■□□□□ 0.84
RAB38-201ENST00000243662 SALL2Q9Y467 1007 aaPredicted RBP20.29■□□□□ 0.84
RAB38-201ENST00000243662 CYP19A1P11511 503 aaPredicted RBP20.28■□□□□ 0.84
RAB38-201ENST00000243662 IL16Q14005 1332 aa20.28■□□□□ 0.84
RAB38-201ENST00000243662 R3HDM1Q15032 1099 aaKnown RBP20.28■□□□□ 0.84
RAB38-201ENST00000243662 RC3H1Q5TC82 1133 aaKnown RBP20.28■□□□□ 0.84
RAB38-201ENST00000243662 GNAI1P63096 354 aa20.27■□□□□ 0.84
RAB38-201ENST00000243662 WDR63Q8IWG1 891 aa20.27■□□□□ 0.84
RAB38-201ENST00000243662 PRAMEF22A3QJZ6 481 aa20.26■□□□□ 0.83
RAB38-201ENST00000243662 PSDA5PKW4 1024 aaPredicted RBP20.26■□□□□ 0.83
RAB38-201ENST00000243662 SNRPA1P09661 255 aaKnown RBP20.26■□□□□ 0.83
RAB38-201ENST00000243662 CRKLP46109 303 aaKnown RBP20.26■□□□□ 0.83
RAB38-201ENST00000243662 AMIGO3Q86WK7 504 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms