RNA–Protein interactions for RNA: ENST00000243040.10

PFDN5-201, Transcript of prefoldin subunit 5, humanhuman

TSL 1 (best)

Gene PFDN5, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-201ENST00000243040 PHACTR3Q96KR7 559 aa14.16□□□□□ -0.14
PFDN5-201ENST00000243040 CCNL1Q9UK58 526 aaPredicted RBP14.16□□□□□ -0.14
PFDN5-201ENST00000243040 CEMIPQ8WUJ3 1361 aa14.16□□□□□ -0.14
PFDN5-201ENST00000243040 GNAT3A8MTJ3 354 aa14.15□□□□□ -0.14
PFDN5-201ENST00000243040 HMGB2P26583 209 aaKnown RBP14.15□□□□□ -0.14
PFDN5-201ENST00000243040 CABP4P57796 275 aa14.15□□□□□ -0.14
PFDN5-201ENST00000243040 SLC15A2Q16348 729 aa14.15□□□□□ -0.14
PFDN5-201ENST00000243040 PLEKHF1Q96S99 279 aa14.15□□□□□ -0.14
PFDN5-201ENST00000243040 SLC52A2Q9HAB3 445 aa14.15□□□□□ -0.14
PFDN5-201ENST00000243040 ATG3Q9NT62 314 aa14.15□□□□□ -0.14
PFDN5-201ENST00000243040 STK32BQ9NY57 414 aa14.15□□□□□ -0.14
PFDN5-201ENST00000243040 COL24A1Q17RW2 1714 aa14.15□□□□□ -0.14
PFDN5-201ENST00000243040 AKT1S1Q96B36 256 aa14.14□□□□□ -0.15
PFDN5-201ENST00000243040 PNNQ9H307 717 aaKnown RBP14.14□□□□□ -0.15
PFDN5-201ENST00000243040 LGR6Q9HBX8 967 aa14.14□□□□□ -0.15
PFDN5-201ENST00000243040 ASAP1Q9ULH1 1129 aa14.14□□□□□ -0.15
PFDN5-201ENST00000243040 KCPQ6ZWJ8 1503 aa14.14□□□□□ -0.15
PFDN5-201ENST00000243040 LOC102724428A0A0B4J2F2 783 aa14.13□□□□□ -0.15
PFDN5-201ENST00000243040 SIK1P57059 783 aa14.13□□□□□ -0.15
PFDN5-201ENST00000243040 ZNF827Q17R98 1081 aa14.13□□□□□ -0.15
PFDN5-201ENST00000243040 NEFMP07197 916 aa14.12□□□□□ -0.15
PFDN5-201ENST00000243040 NFATC2IPQ8NCF5 419 aa14.12□□□□□ -0.15
PFDN5-201ENST00000243040 KDM3BQ7LBC6 1761 aa14.11□□□□□ -0.15
PFDN5-201ENST00000243040 ANP32CO43423 234 aa14.11□□□□□ -0.15
PFDN5-201ENST00000243040 HTATSF1O43719 755 aaKnown RBP14.11□□□□□ -0.15
PFDN5-201ENST00000243040 KCNQ4P56696 695 aa14.11□□□□□ -0.15
PFDN5-201ENST00000243040 IL17REQ8NFR9 667 aa14.11□□□□□ -0.15
PFDN5-201ENST00000243040 MAPK8IP3Q9UPT6 1336 aa14.11□□□□□ -0.15
PFDN5-201ENST00000243040 WDR43Q15061 677 aaKnown RBP eCLIP14.1□□□□□ -0.15
PFDN5-201ENST00000243040 MYH14Q7Z406 1995 aaKnown RBP14.1□□□□□ -0.15
PFDN5-201ENST00000243040 SRCAPQ6ZRS2 3230 aa14.09□□□□□ -0.15
PFDN5-201ENST00000243040 TEFQ10587 303 aa14.09□□□□□ -0.15
PFDN5-201ENST00000243040 NFE2L2Q16236 605 aa14.09□□□□□ -0.15
PFDN5-201ENST00000243040 SLC4A9Q96Q91 983 aa14.09□□□□□ -0.15
PFDN5-201ENST00000243040 C4AP0C0L4 1744 aa14.08□□□□□ -0.16
PFDN5-201ENST00000243040 ATP6V1AP38606 617 aa14.08□□□□□ -0.16
PFDN5-201ENST00000243040 ITPK1Q13572 414 aa14.08□□□□□ -0.16
PFDN5-201ENST00000243040 RTF1Q92541 710 aaKnown RBP14.08□□□□□ -0.16
PFDN5-201ENST00000243040 PNPLA7Q6ZV29 1317 aa14.08□□□□□ -0.16
PFDN5-201ENST00000243040 LINC00116Q8NCU8 138 aa14.07□□□□□ -0.16
PFDN5-201ENST00000243040 LAMB4A4D0S4 1761 aa14.06□□□□□ -0.16
PFDN5-201ENST00000243040 RUNDC1Q96C34 613 aa14.06□□□□□ -0.16
PFDN5-201ENST00000243040 RBM42Q9BTD8 480 aaKnown RBP14.06□□□□□ -0.16
PFDN5-201ENST00000243040 PDGFDQ9GZP0 370 aaPredicted RBP14.06□□□□□ -0.16
PFDN5-201ENST00000243040 TFCP2L1Q9NZI6 479 aa14.06□□□□□ -0.16
PFDN5-201ENST00000243040 ADAMTS8Q9UP79 889 aa14.06□□□□□ -0.16
PFDN5-201ENST00000243040 CNTNAP4Q9C0A0 1308 aa14.06□□□□□ -0.16
PFDN5-201ENST00000243040 SLC39A6Q13433 755 aa14.05□□□□□ -0.16
PFDN5-201ENST00000243040 CCDC184Q52MB2 194 aa14.05□□□□□ -0.16
PFDN5-201ENST00000243040 MCM10Q7L590 875 aa14.05□□□□□ -0.16
PFDN5-201ENST00000243040 VSIG10Q8N0Z9 540 aa14.05□□□□□ -0.16
PFDN5-201ENST00000243040 AK7Q96M32 723 aa14.05□□□□□ -0.16
PFDN5-201ENST00000243040 PTCD1O75127 700 aaKnown RBP14.04□□□□□ -0.16
PFDN5-201ENST00000243040 TMPOP42166 694 aaKnown RBP14.04□□□□□ -0.16
PFDN5-201ENST00000243040 DCTN1Q14203 1278 aa14.04□□□□□ -0.16
PFDN5-201ENST00000243040 RC3H1Q5TC82 1133 aaKnown RBP14.04□□□□□ -0.16
PFDN5-201ENST00000243040 ZNF790Q6PG37 636 aa14.04□□□□□ -0.16
PFDN5-201ENST00000243040 TTC5Q8N0Z6 440 aa14.04□□□□□ -0.16
PFDN5-201ENST00000243040 SLC16A10Q8TF71 515 aa14.04□□□□□ -0.16
PFDN5-201ENST00000243040 SPON1Q9HCB6 807 aa14.04□□□□□ -0.16
PFDN5-201ENST00000243040 SSFA2P28290 1259 aa14.03□□□□□ -0.16
PFDN5-201ENST00000243040 LMOD3Q0VAK6 560 aa14.03□□□□□ -0.16
PFDN5-201ENST00000243040 CCDC146Q8IYE0 955 aa14.03□□□□□ -0.16
PFDN5-201ENST00000243040 FLAD1Q8NFF5 587 aa14.03□□□□□ -0.16
PFDN5-201ENST00000243040 MTFR1LQ9H019 292 aa14.03□□□□□ -0.16
PFDN5-201ENST00000243040 HEG1Q9ULI3 1381 aa14.03□□□□□ -0.16
PFDN5-201ENST00000243040 BTBD11A6QL63 1104 aa14.02□□□□□ -0.17
PFDN5-201ENST00000243040 COL23A1Q86Y22 540 aaPredicted RBP14.02□□□□□ -0.17
PFDN5-201ENST00000243040 MRS2Q9HD23 443 aa14.02□□□□□ -0.17
PFDN5-201ENST00000243040 ZBTB7AO95365 584 aa14.01□□□□□ -0.17
PFDN5-201ENST00000243040 RIPK4P57078 832 aa14.01□□□□□ -0.17
PFDN5-201ENST00000243040 AMIGO3Q86WK7 504 aa14.01□□□□□ -0.17
PFDN5-201ENST00000243040 ZNF496Q96IT1 587 aaPredicted RBP14.01□□□□□ -0.17
PFDN5-201ENST00000243040 SGIP1Q9BQI5 828 aa14.01□□□□□ -0.17
PFDN5-201ENST00000243040 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14□□□□□ -0.17
PFDN5-201ENST00000243040 GNPATO15228 680 aa14□□□□□ -0.17
PFDN5-201ENST00000243040 TAF7Q15545 349 aaPredicted RBP14□□□□□ -0.17
PFDN5-201ENST00000243040 DNAJC10Q8IXB1 793 aa14□□□□□ -0.17
PFDN5-201ENST00000243040 PNISRQ8TF01 805 aaKnown RBP14□□□□□ -0.17
PFDN5-201ENST00000243040 FMNL2Q96PY5 1086 aa14□□□□□ -0.17
PFDN5-201ENST00000243040 RPS6KA4O75676 772 aa13.99□□□□□ -0.17
PFDN5-201ENST00000243040 CYP19A1P11511 503 aaPredicted RBP13.99□□□□□ -0.17
PFDN5-201ENST00000243040 ADRA2BP18089 450 aa13.99□□□□□ -0.17
PFDN5-201ENST00000243040 PTGER2P43116 358 aa13.99□□□□□ -0.17
PFDN5-201ENST00000243040 CRKLP46109 303 aaKnown RBP13.99□□□□□ -0.17
PFDN5-201ENST00000243040 RTCBQ9Y3I0 505 aaKnown RBP13.99□□□□□ -0.17
PFDN5-201ENST00000243040 SCN7AQ01118 1682 aa13.98□□□□□ -0.17
PFDN5-201ENST00000243040 KCNQ3O43525 872 aa13.98□□□□□ -0.17
PFDN5-201ENST00000243040 THUMPD2Q9BTF0 503 aaKnown RBP13.98□□□□□ -0.17
PFDN5-201ENST00000243040 TEX13AQ9BXU3 409 aaPredicted RBP13.98□□□□□ -0.17
PFDN5-201ENST00000243040 TRIM35Q9UPQ4 493 aa13.98□□□□□ -0.17
PFDN5-201ENST00000243040 BCORQ6W2J9 1755 aa13.98□□□□□ -0.17
PFDN5-201ENST00000243040 PHF14O94880 888 aa13.97□□□□□ -0.17
PFDN5-201ENST00000243040 INTS5Q6P9B9 1019 aaKnown RBP13.97□□□□□ -0.17
PFDN5-201ENST00000243040 CCDC87Q9NVE4 849 aa13.97□□□□□ -0.17
PFDN5-201ENST00000243040 BABAM1Q9NWV8 329 aa13.97□□□□□ -0.17
PFDN5-201ENST00000243040 ATF5Q9Y2D1 282 aaPredicted RBP13.97□□□□□ -0.17
PFDN5-201ENST00000243040 RRP7AQ9Y3A4 280 aaKnown RBP13.97□□□□□ -0.17
PFDN5-201ENST00000243040 SOS1Q07889 1333 aaPredicted RBP13.96□□□□□ -0.17
PFDN5-201ENST00000243040 APAF1O14727 1248 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms