RNA–Protein interactions for RNA: ENST00000233505.12

CENPA-201, Transcript of centromere protein A, humanhuman

TSL 1 (best) BASIC

Gene CENPA, Length 1,299 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPA-201ENST00000233505 NFATC2IPQ8NCF5 419 aa25.43■■□□□ 1.66
CENPA-201ENST00000233505 SCN11AQ9UI33 1791 aa25.43■■□□□ 1.66
CENPA-201ENST00000233505 TMPOP42166 694 aaKnown RBP25.42■■□□□ 1.66
CENPA-201ENST00000233505 CCDC146Q8IYE0 955 aa25.42■■□□□ 1.66
CENPA-201ENST00000233505 ATG3Q9NT62 314 aa25.42■■□□□ 1.66
CENPA-201ENST00000233505 HMGB2P26583 209 aaKnown RBP25.41■■□□□ 1.66
CENPA-201ENST00000233505 ASAP1Q9ULH1 1129 aa25.41■■□□□ 1.66
CENPA-201ENST00000233505 ITGB4P16144 1822 aa25.41■■□□□ 1.66
CENPA-201ENST00000233505 LRP5O75197 1615 aa25.41■■□□□ 1.66
CENPA-201ENST00000233505 LMOD3Q0VAK6 560 aa25.4■■□□□ 1.66
CENPA-201ENST00000233505 TEFQ10587 303 aa25.4■■□□□ 1.66
CENPA-201ENST00000233505 NBPF14Q5TI25 921 aa25.38■■□□□ 1.65
CENPA-201ENST00000233505 RIPK4P57078 832 aa25.37■■□□□ 1.65
CENPA-201ENST00000233505 MCM10Q7L590 875 aa25.37■■□□□ 1.65
CENPA-201ENST00000233505 LRRC4BQ9NT99 713 aa25.37■■□□□ 1.65
CENPA-201ENST00000233505 CCNL1Q9UK58 526 aaPredicted RBP25.37■■□□□ 1.65
CENPA-201ENST00000233505 LY75O60449 1722 aa25.37■■□□□ 1.65
CENPA-201ENST00000233505 ANO8Q9HCE9 1232 aaPredicted RBP25.36■■□□□ 1.65
CENPA-201ENST00000233505 KAT6BQ8WYB5 2073 aa25.35■■□□□ 1.65
CENPA-201ENST00000233505 LOC102724428A0A0B4J2F2 783 aa25.35■■□□□ 1.65
CENPA-201ENST00000233505 SIK1P57059 783 aa25.35■■□□□ 1.65
CENPA-201ENST00000233505 PAPPAQ13219 1627 aa25.34■■□□□ 1.65
CENPA-201ENST00000233505 DCTN1Q14203 1278 aa25.34■■□□□ 1.65
CENPA-201ENST00000233505 APAF1O14727 1248 aa25.33■■□□□ 1.65
CENPA-201ENST00000233505 NCBP3Q53F19 620 aaKnown RBP25.33■■□□□ 1.65
CENPA-201ENST00000233505 RRP7AQ9Y3A4 280 aaKnown RBP25.32■■□□□ 1.64
CENPA-201ENST00000233505 TAF7Q15545 349 aaPredicted RBP25.3■■□□□ 1.64
CENPA-201ENST00000233505 ZNF790Q6PG37 636 aa25.3■■□□□ 1.64
CENPA-201ENST00000233505 TRIM35Q9UPQ4 493 aa25.3■■□□□ 1.64
CENPA-201ENST00000233505 ZNF831Q5JPB2 1677 aa25.29■■□□□ 1.64
CENPA-201ENST00000233505 KCPQ6ZWJ8 1503 aa25.29■■□□□ 1.64
CENPA-201ENST00000233505 BTBD11A6QL63 1104 aa25.29■■□□□ 1.64
CENPA-201ENST00000233505 TTC5Q8N0Z6 440 aa25.29■■□□□ 1.64
CENPA-201ENST00000233505 MIER1Q8N108 512 aa25.29■■□□□ 1.64
CENPA-201ENST00000233505 SLC4A9Q96Q91 983 aa25.29■■□□□ 1.64
CENPA-201ENST00000233505 SIPA1L3O60292 1781 aaPredicted RBP25.28■■□□□ 1.64
CENPA-201ENST00000233505 SLC39A6Q13433 755 aa25.28■■□□□ 1.64
CENPA-201ENST00000233505 NEUROD2Q15784 382 aa25.28■■□□□ 1.64
CENPA-201ENST00000233505 FAM9BQ8IZU0 186 aa25.28■■□□□ 1.64
CENPA-201ENST00000233505 VSIG10Q8N0Z9 540 aa25.28■■□□□ 1.64
CENPA-201ENST00000233505 BABAM1Q9NWV8 329 aa25.28■■□□□ 1.64
CENPA-201ENST00000233505 STK32BQ9NY57 414 aa25.28■■□□□ 1.64
CENPA-201ENST00000233505 ATP6V1AP38606 617 aa25.27■■□□□ 1.64
CENPA-201ENST00000233505 KCNQ4P56696 695 aa25.27■■□□□ 1.64
CENPA-201ENST00000233505 SLC15A2Q16348 729 aa25.27■■□□□ 1.64
CENPA-201ENST00000233505 AKT1S1Q96B36 256 aa25.27■■□□□ 1.64
CENPA-201ENST00000233505 RBM42Q9BTD8 480 aaKnown RBP25.27■■□□□ 1.64
CENPA-201ENST00000233505 THUMPD2Q9BTF0 503 aaKnown RBP25.27■■□□□ 1.64
CENPA-201ENST00000233505 CICQ96RK0 1608 aaPredicted RBP25.26■■□□□ 1.63
CENPA-201ENST00000233505 PTCD1O75127 700 aaKnown RBP25.26■■□□□ 1.63
CENPA-201ENST00000233505 ITPK1Q13572 414 aa25.26■■□□□ 1.63
CENPA-201ENST00000233505 CCDC27Q2M243 656 aa25.26■■□□□ 1.63
CENPA-201ENST00000233505 ZNF827Q17R98 1081 aa25.25■■□□□ 1.63
CENPA-201ENST00000233505 DLG5Q8TDM6 1919 aa25.25■■□□□ 1.63
CENPA-201ENST00000233505 NGEFQ8N5V2 710 aa25.24■■□□□ 1.63
CENPA-201ENST00000233505 PDGFDQ9GZP0 370 aaPredicted RBP25.24■■□□□ 1.63
CENPA-201ENST00000233505 VIRMAQ69YN4 1812 aaKnown RBP25.23■■□□□ 1.63
CENPA-201ENST00000233505 CALD1Q05682 793 aaKnown RBP25.23■■□□□ 1.63
CENPA-201ENST00000233505 LINC00116Q8NCU8 138 aa25.23■■□□□ 1.63
CENPA-201ENST00000233505 ZNF496Q96IT1 587 aaPredicted RBP25.23■■□□□ 1.63
CENPA-201ENST00000233505 FMNL2Q96PY5 1086 aa25.23■■□□□ 1.63
CENPA-201ENST00000233505 HEG1Q9ULI3 1381 aa25.22■■□□□ 1.63
CENPA-201ENST00000233505 UBR2Q8IWV8 1755 aa25.22■■□□□ 1.63
CENPA-201ENST00000233505 C5P01031 1676 aa25.22■■□□□ 1.63
CENPA-201ENST00000233505 CNTNAP4Q9C0A0 1308 aa25.21■■□□□ 1.63
CENPA-201ENST00000233505 RC3H1Q5TC82 1133 aaKnown RBP25.2■■□□□ 1.62
CENPA-201ENST00000233505 KCNQ3O43525 872 aa25.19■■□□□ 1.62
CENPA-201ENST00000233505 TEX13AQ9BXU3 409 aaPredicted RBP25.19■■□□□ 1.62
CENPA-201ENST00000233505 C4BP0C0L5 1744 aa25.18■■□□□ 1.62
CENPA-201ENST00000233505 AK7Q96M32 723 aa25.18■■□□□ 1.62
CENPA-201ENST00000233505 CASZ1Q86V15 1759 aa25.18■■□□□ 1.62
CENPA-201ENST00000233505 CHL1O00533 1208 aa25.17■■□□□ 1.62
CENPA-201ENST00000233505 WWC1Q8IX03 1113 aa25.17■■□□□ 1.62
CENPA-201ENST00000233505 DNAJC10Q8IXB1 793 aa25.17■■□□□ 1.62
CENPA-201ENST00000233505 SPON1Q9HCB6 807 aa25.17■■□□□ 1.62
CENPA-201ENST00000233505 TFCP2L1Q9NZI6 479 aa25.17■■□□□ 1.62
CENPA-201ENST00000233505 TSPYL4Q9UJ04 414 aa25.17■■□□□ 1.62
CENPA-201ENST00000233505 TJP1Q07157 1748 aa25.16■■□□□ 1.62
CENPA-201ENST00000233505 CFAP44Q96MT7 982 aa25.16■■□□□ 1.62
CENPA-201ENST00000233505 IFT57Q9NWB7 429 aa25.16■■□□□ 1.62
CENPA-201ENST00000233505 MIS18AQ9NYP9 233 aa25.16■■□□□ 1.62
CENPA-201ENST00000233505 TAF1LQ8IZX4 1826 aa25.15■■□□□ 1.62
CENPA-201ENST00000233505 ZNF853P0CG23 659 aa25.15■■□□□ 1.62
CENPA-201ENST00000233505 CYP19A1P11511 503 aaPredicted RBP25.15■■□□□ 1.62
CENPA-201ENST00000233505 EIF4A1P60842 406 aaKnown RBP25.15■■□□□ 1.62
CENPA-201ENST00000233505 FLAD1Q8NFF5 587 aa25.15■■□□□ 1.62
CENPA-201ENST00000233505 KDM3BQ7LBC6 1761 aa25.15■■□□□ 1.62
CENPA-201ENST00000233505 PNPLA7Q6ZV29 1317 aa25.14■■□□□ 1.62
CENPA-201ENST00000233505 ZBTB7AO95365 584 aa25.14■■□□□ 1.62
CENPA-201ENST00000233505 STARD3NLO95772 234 aa25.14■■□□□ 1.62
CENPA-201ENST00000233505 SNRPA1P09661 255 aaKnown RBP25.14■■□□□ 1.62
CENPA-201ENST00000233505 SSFA2P28290 1259 aa25.14■■□□□ 1.62
CENPA-201ENST00000233505 CRKLP46109 303 aaKnown RBP25.14■■□□□ 1.62
CENPA-201ENST00000233505 COL5A3P25940 1745 aaPredicted RBP25.14■■□□□ 1.61
CENPA-201ENST00000233505 IL16Q14005 1332 aa25.13■■□□□ 1.61
CENPA-201ENST00000233505 GNPATO15228 680 aa25.12■■□□□ 1.61
CENPA-201ENST00000233505 GNAI1P63096 354 aa25.12■■□□□ 1.61
CENPA-201ENST00000233505 ADRA2BP18089 450 aa25.11■■□□□ 1.61
CENPA-201ENST00000233505 INTS5Q6P9B9 1019 aaKnown RBP25.11■■□□□ 1.61
CENPA-201ENST00000233505 CCDC87Q9NVE4 849 aa25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms