RNA–Protein interactions for RNA: ENST00000229387.6

RFX4-201, Transcript of regulatory factor X4, humanhuman

TSL 1 (best) BASIC

Gene RFX4, Length 3,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-201ENST00000229387 CYP2C19P33261 490 aa6.87□□□□□ -1.31
RFX4-201ENST00000229387 DDIT3P35638 169 aa6.87□□□□□ -1.31
RFX4-201ENST00000229387 PLSCR2Q9NRY7 297 aa6.87□□□□□ -1.31
RFX4-201ENST00000229387 MRVI1Q9Y6F6 885 aa6.87□□□□□ -1.31
RFX4-201ENST00000229387 MAST1Q9Y2H9 1570 aa6.87□□□□□ -1.31
RFX4-201ENST00000229387 U2AF1L5P0DN76 240 aaPredicted RBP6.86□□□□□ -1.31
RFX4-201ENST00000229387 U2AF1Q01081 240 aaKnown RBP eCLIP6.86□□□□□ -1.31
RFX4-201ENST00000229387 DUSP27Q5VZP5 1158 aa6.86□□□□□ -1.31
RFX4-201ENST00000229387 WAPLQ7Z5K2 1190 aa6.86□□□□□ -1.31
RFX4-201ENST00000229387 ATP7AQ04656 1500 aa6.86□□□□□ -1.31
RFX4-201ENST00000229387 ZFYVE16Q7Z3T8 1539 aa6.86□□□□□ -1.31
RFX4-201ENST00000229387 TRPM1Q7Z4N2 1603 aa6.86□□□□□ -1.31
RFX4-201ENST00000229387 GOLGA6L6A8MZA4 724 aa6.86□□□□□ -1.31
RFX4-201ENST00000229387 KDM4AO75164 1064 aa6.86□□□□□ -1.31
RFX4-201ENST00000229387 LRCH2Q5VUJ6 765 aa6.86□□□□□ -1.31
RFX4-201ENST00000229387 SERPINA10Q9UK55 444 aa6.86□□□□□ -1.31
RFX4-201ENST00000229387 NCKAP5LQ9HCH0 1330 aa6.86□□□□□ -1.31
RFX4-201ENST00000229387 SCAF11Q99590 1463 aaKnown RBP6.86□□□□□ -1.31
RFX4-201ENST00000229387 PRDM15P57071 1507 aaPredicted RBP6.86□□□□□ -1.31
RFX4-201ENST00000229387 HNRNPH2P55795 449 aaKnown RBP6.86□□□□□ -1.31
RFX4-201ENST00000229387 PANK1Q8TE04 598 aa6.86□□□□□ -1.31
RFX4-201ENST00000229387 PRAM1Q96QH2 718 aa6.86□□□□□ -1.31
RFX4-201ENST00000229387 SPTLC3Q9NUV7 552 aa6.86□□□□□ -1.31
RFX4-201ENST00000229387 LIG1P18858 919 aa6.85□□□□□ -1.31
RFX4-201ENST00000229387 SETDB1Q15047 1291 aa6.85□□□□□ -1.31
RFX4-201ENST00000229387 ZC3H12AQ5D1E8 599 aaKnown RBP6.85□□□□□ -1.31
RFX4-201ENST00000229387 KRT222Q8N1A0 295 aa6.85□□□□□ -1.31
RFX4-201ENST00000229387 PIBF1Q8WXW3 757 aa6.85□□□□□ -1.31
RFX4-201ENST00000229387 GBP4Q96PP9 640 aa6.85□□□□□ -1.31
RFX4-201ENST00000229387 RYDENQ9NUL5 291 aaKnown RBP6.85□□□□□ -1.31
RFX4-201ENST00000229387 NPATQ14207 1427 aa6.85□□□□□ -1.31
RFX4-201ENST00000229387 ATP2B1P20020 1258 aa6.85□□□□□ -1.31
RFX4-201ENST00000229387 CHAF1AQ13111 956 aaPredicted RBP6.85□□□□□ -1.31
RFX4-201ENST00000229387 CCDC27Q2M243 656 aa6.85□□□□□ -1.31
RFX4-201ENST00000229387 CLEC17AQ6ZS10 378 aa6.85□□□□□ -1.31
RFX4-201ENST00000229387 TBC1D32Q96NH3 1257 aa6.85□□□□□ -1.31
RFX4-201ENST00000229387 DIAPH3Q9NSV4 1193 aa6.85□□□□□ -1.31
RFX4-201ENST00000229387 COG6Q9Y2V7 657 aa6.85□□□□□ -1.31
RFX4-201ENST00000229387 YEATS2Q9ULM3 1422 aa6.85□□□□□ -1.31
RFX4-201ENST00000229387 ANKRD33BA6NCL7 494 aa6.85□□□□□ -1.31
RFX4-201ENST00000229387 RFX1P22670 979 aa6.85□□□□□ -1.31
RFX4-201ENST00000229387 FKBP5Q13451 457 aaPredicted RBP6.85□□□□□ -1.31
RFX4-201ENST00000229387 TSHZ1Q6ZSZ6 1077 aa6.85□□□□□ -1.31
RFX4-201ENST00000229387 TBC1D22AQ8WUA7 517 aa6.85□□□□□ -1.31
RFX4-201ENST00000229387 JRKLQ9Y4A0 524 aa6.85□□□□□ -1.31
RFX4-201ENST00000229387 CLTCL1P53675 1640 aa6.84□□□□□ -1.31
RFX4-201ENST00000229387 CTAGE5O15320 804 aa6.84□□□□□ -1.31
RFX4-201ENST00000229387 SUGP1Q8IWZ8 645 aaKnown RBP6.84□□□□□ -1.31
RFX4-201ENST00000229387 MFRPQ9BY79 579 aa6.84□□□□□ -1.31
RFX4-201ENST00000229387 ARIH1Q9Y4X5 557 aaPredicted RBP6.84□□□□□ -1.31
RFX4-201ENST00000229387 PAXBP1Q9Y5B6 917 aa6.84□□□□□ -1.31
RFX4-201ENST00000229387 NSD3Q9BZ95 1437 aa6.84□□□□□ -1.31
RFX4-201ENST00000229387 UHRF1BP1LA0JNW5 1464 aa6.84□□□□□ -1.31
RFX4-201ENST00000229387 UNC13BO14795 1591 aa6.84□□□□□ -1.31
RFX4-201ENST00000229387 E9PCH4 1651 aa6.84□□□□□ -1.31
RFX4-201ENST00000229387 EIF3AQ14152 1382 aaKnown RBP6.84□□□□□ -1.31
RFX4-201ENST00000229387 CCDC196A0A1B0GTZ2 297 aa6.84□□□□□ -1.31
RFX4-201ENST00000229387 KLHL40Q2TBA0 621 aa6.84□□□□□ -1.31
RFX4-201ENST00000229387 TCP11L2Q8N4U5 519 aa6.84□□□□□ -1.31
RFX4-201ENST00000229387 GOLGA6L1Q8N7Z2 621 aa6.84□□□□□ -1.31
RFX4-201ENST00000229387 TSR2Q969E8 191 aaKnown RBP6.84□□□□□ -1.31
RFX4-201ENST00000229387 C14orf93Q9H972 538 aaKnown RBP6.84□□□□□ -1.31
RFX4-201ENST00000229387 IQGAP3Q86VI3 1631 aa6.84□□□□□ -1.32
RFX4-201ENST00000229387 RTEL1-TNFRSF6BF6WH68 1400 aa6.83□□□□□ -1.32
RFX4-201ENST00000229387 COQ9O75208 318 aa6.83□□□□□ -1.32
RFX4-201ENST00000229387 CALR3Q96L12 384 aaKnown RBP6.83□□□□□ -1.32
RFX4-201ENST00000229387 PPP1R1BQ9UD71 204 aaPredicted RBP6.83□□□□□ -1.32
RFX4-201ENST00000229387 TSC1Q92574 1164 aa6.83□□□□□ -1.32
RFX4-201ENST00000229387 PAIP2Q9BPZ3 127 aaKnown RBP6.83□□□□□ -1.32
RFX4-201ENST00000229387 ATG3Q9NT62 314 aa6.83□□□□□ -1.32
RFX4-201ENST00000229387 IVNS1ABPQ9Y6Y0 642 aa6.83□□□□□ -1.32
RFX4-201ENST00000229387 PTPRTO14522 1441 aa6.83□□□□□ -1.32
RFX4-201ENST00000229387 TSGA10IPQ3SY00 556 aa6.83□□□□□ -1.32
RFX4-201ENST00000229387 DNAJC21Q5F1R6 531 aaKnown RBP6.83□□□□□ -1.32
RFX4-201ENST00000229387 ZNF513Q8N8E2 541 aaPredicted RBP6.83□□□□□ -1.32
RFX4-201ENST00000229387 KIF18AQ8NI77 898 aa6.83□□□□□ -1.32
RFX4-201ENST00000229387 JARID2Q92833 1246 aaPredicted RBP6.83□□□□□ -1.32
RFX4-201ENST00000229387 CCDC102AQ96A19 550 aa6.83□□□□□ -1.32
RFX4-201ENST00000229387 LARP6Q9BRS8 491 aaKnown RBP6.83□□□□□ -1.32
RFX4-201ENST00000229387 CABP1Q9NZU7 370 aa6.83□□□□□ -1.32
RFX4-201ENST00000229387 ZBTB12Q9Y330 459 aaPredicted RBP6.83□□□□□ -1.32
RFX4-201ENST00000229387 PLXNC1O60486 1568 aa6.82□□□□□ -1.32
RFX4-201ENST00000229387 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.82□□□□□ -1.32
RFX4-201ENST00000229387 GOLGA6L22H0YM25 854 aa6.82□□□□□ -1.32
RFX4-201ENST00000229387 ELL2O00472 640 aaPredicted RBP6.82□□□□□ -1.32
RFX4-201ENST00000229387 NRDCO43847 1150 aa6.82□□□□□ -1.32
RFX4-201ENST00000229387 SLFN5Q08AF3 891 aa6.82□□□□□ -1.32
RFX4-201ENST00000229387 NOLC1Q14978 699 aaKnown RBP eCLIP6.82□□□□□ -1.32
RFX4-201ENST00000229387 SP7Q8TDD2 431 aaPredicted RBP6.82□□□□□ -1.32
RFX4-201ENST00000229387 TNPO1Q92973 898 aaKnown RBP6.82□□□□□ -1.32
RFX4-201ENST00000229387 ZRANB1Q9UGI0 708 aa6.82□□□□□ -1.32
RFX4-201ENST00000229387 A0A1B0GUL7 405 aa6.82□□□□□ -1.32
RFX4-201ENST00000229387 MPHOSPH10O00566 681 aaKnown RBP6.82□□□□□ -1.32
RFX4-201ENST00000229387 NEFHP12036 1026 aa6.82□□□□□ -1.32
RFX4-201ENST00000229387 ATP6V1AP38606 617 aa6.82□□□□□ -1.32
RFX4-201ENST00000229387 TTLL12Q14166 644 aaPredicted RBP6.82□□□□□ -1.32
RFX4-201ENST00000229387 NOL10Q9BSC4 688 aaKnown RBP6.82□□□□□ -1.32
RFX4-201ENST00000229387 DEF6Q9H4E7 631 aa6.82□□□□□ -1.32
RFX4-201ENST00000229387 ERVK-7P63135 1459 aa6.82□□□□□ -1.32
RFX4-201ENST00000229387 CEBPAP49715 358 aaPredicted RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms