RNA–Protein interactions for RNA: ENST00000229268.12

USP5-201, Transcript of ubiquitin specific peptidase 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene USP5, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP5-201ENST00000229268 SMARCA5O60264 1052 aaPredicted RBP16.79■□□□□ 0.28
USP5-201ENST00000229268 NWD1Q149M9 1564 aa16.78■□□□□ 0.28
USP5-201ENST00000229268 DAXXQ9UER7 740 aaPredicted RBP16.78■□□□□ 0.28
USP5-201ENST00000229268 EIF4A1P60842 406 aaKnown RBP16.77■□□□□ 0.28
USP5-201ENST00000229268 C16orf71Q8IYS4 520 aaPredicted RBP16.77■□□□□ 0.28
USP5-201ENST00000229268 RGPD1P0DJD0 1748 aa16.77■□□□□ 0.27
USP5-201ENST00000229268 MFAP1P55081 439 aaKnown RBP16.77■□□□□ 0.27
USP5-201ENST00000229268 CHD1LQ86WJ1 897 aa16.77■□□□□ 0.27
USP5-201ENST00000229268 MARF1Q9Y4F3 1742 aaKnown RBP16.76■□□□□ 0.27
USP5-201ENST00000229268 PXDNQ92626 1479 aa16.76■□□□□ 0.27
USP5-201ENST00000229268 MYL6BP14649 208 aa16.76■□□□□ 0.27
USP5-201ENST00000229268 SMC5Q8IY18 1101 aa16.76■□□□□ 0.27
USP5-201ENST00000229268 RGPD2P0DJD1 1756 aa16.76■□□□□ 0.27
USP5-201ENST00000229268 PIP4K2BP78356 416 aa16.75■□□□□ 0.27
USP5-201ENST00000229268 PROSER3Q2NL68 480 aa16.75■□□□□ 0.27
USP5-201ENST00000229268 INTS3Q68E01 1043 aaKnown RBP16.75■□□□□ 0.27
USP5-201ENST00000229268 CHMP4BQ9H444 224 aaKnown RBP16.75■□□□□ 0.27
USP5-201ENST00000229268 PI4KAP2A4QPH2 592 aa16.74■□□□□ 0.27
USP5-201ENST00000229268 PI4KAP1Q8N8J0 262 aa16.74■□□□□ 0.27
USP5-201ENST00000229268 PTPRCP08575 1304 aa16.74■□□□□ 0.27
USP5-201ENST00000229268 TNS3Q68CZ2 1445 aa16.74■□□□□ 0.27
USP5-201ENST00000229268 SPG7Q9UQ90 795 aa16.73■□□□□ 0.27
USP5-201ENST00000229268 EXOC6BQ9Y2D4 811 aa16.73■□□□□ 0.27
USP5-201ENST00000229268 NUCB1Q02818 461 aa16.73■□□□□ 0.27
USP5-201ENST00000229268 LARP1Q6PKG0 1096 aaKnown RBP16.73■□□□□ 0.27
USP5-201ENST00000229268 OTUD7AQ8TE49 926 aaPredicted RBP16.73■□□□□ 0.27
USP5-201ENST00000229268 RTN4Q9NQC3 1192 aaKnown RBP16.73■□□□□ 0.27
USP5-201ENST00000229268 KAT6BQ8WYB5 2073 aa16.72■□□□□ 0.27
USP5-201ENST00000229268 CYP27B1O15528 508 aa16.72■□□□□ 0.27
USP5-201ENST00000229268 ADAMTS2O95450 1211 aa16.72■□□□□ 0.27
USP5-201ENST00000229268 MED1Q15648 1581 aaPredicted RBP16.72■□□□□ 0.27
USP5-201ENST00000229268 CEP85Q6P2H3 762 aa16.71■□□□□ 0.27
USP5-201ENST00000229268 ZNF330Q9Y3S2 320 aaPredicted RBP16.71■□□□□ 0.27
USP5-201ENST00000229268 PTCD1O75127 700 aaKnown RBP16.71■□□□□ 0.27
USP5-201ENST00000229268 PHKG2P15735 406 aa16.71■□□□□ 0.27
USP5-201ENST00000229268 LRRFIP2Q9Y608 721 aaKnown RBP16.71■□□□□ 0.27
USP5-201ENST00000229268 TSHZ3Q63HK5 1081 aa16.71■□□□□ 0.26
USP5-201ENST00000229268 IFNL2Q8IZJ0 200 aa16.71■□□□□ 0.26
USP5-201ENST00000229268 ARXQ96QS3 562 aa16.71■□□□□ 0.26
USP5-201ENST00000229268 NUTM2BA6NNL0 878 aaPredicted RBP16.7■□□□□ 0.26
USP5-201ENST00000229268 NUTM2EB1AL46 878 aaPredicted RBP16.7■□□□□ 0.26
USP5-201ENST00000229268 NUTM2AQ8IVF1 878 aaPredicted RBP16.7■□□□□ 0.26
USP5-201ENST00000229268 CCT4P50991 539 aaKnown RBP16.7■□□□□ 0.26
USP5-201ENST00000229268 CABP4P57796 275 aa16.7■□□□□ 0.26
USP5-201ENST00000229268 SPRYD3Q8NCJ5 442 aa16.7■□□□□ 0.26
USP5-201ENST00000229268 CEMIPQ8WUJ3 1361 aa16.7■□□□□ 0.26
USP5-201ENST00000229268 TTC5Q8N0Z6 440 aa16.69■□□□□ 0.26
USP5-201ENST00000229268 JARID2Q92833 1246 aaPredicted RBP16.69■□□□□ 0.26
USP5-201ENST00000229268 UPF2Q9HAU5 1272 aaKnown RBP16.69■□□□□ 0.26
USP5-201ENST00000229268 RGS12O14924 1447 aa16.69■□□□□ 0.26
USP5-201ENST00000229268 BTG4Q9NY30 223 aa16.69■□□□□ 0.26
USP5-201ENST00000229268 GIGYF1O75420 1035 aaPredicted RBP16.69■□□□□ 0.26
USP5-201ENST00000229268 GNAI2P04899 355 aa16.69■□□□□ 0.26
USP5-201ENST00000229268 GCC1Q96CN9 775 aa16.69■□□□□ 0.26
USP5-201ENST00000229268 ZNF496Q96IT1 587 aaPredicted RBP16.69■□□□□ 0.26
USP5-201ENST00000229268 ZNF790Q6PG37 636 aa16.68■□□□□ 0.26
USP5-201ENST00000229268 ANKRD44Q8N8A2 993 aa16.68■□□□□ 0.26
USP5-201ENST00000229268 RGPD5Q99666 1765 aa16.68■□□□□ 0.26
USP5-201ENST00000229268 PNMA6EA0A0J9YXQ4 647 aa16.68■□□□□ 0.26
USP5-201ENST00000229268 UBTFL1P0CB47 393 aaPredicted RBP16.67■□□□□ 0.26
USP5-201ENST00000229268 CWF19L2Q2TBE0 894 aaKnown RBP16.67■□□□□ 0.26
USP5-201ENST00000229268 MEGF6O75095 1541 aa16.67■□□□□ 0.26
USP5-201ENST00000229268 NBPF7P0C2Y1 421 aaPredicted RBP16.67■□□□□ 0.26
USP5-201ENST00000229268 SRCIN1Q9C0H9 1055 aa16.67■□□□□ 0.26
USP5-201ENST00000229268 SLC52A2Q9HAB3 445 aa16.67■□□□□ 0.26
USP5-201ENST00000229268 DCCP43146 1447 aa16.67■□□□□ 0.26
USP5-201ENST00000229268 MAP3K2Q9Y2U5 619 aa16.67■□□□□ 0.26
USP5-201ENST00000229268 USP16Q9Y5T5 823 aa16.67■□□□□ 0.26
USP5-201ENST00000229268 SOS2Q07890 1332 aaPredicted RBP16.66■□□□□ 0.26
USP5-201ENST00000229268 RTL5Q5HYW3 569 aaPredicted RBP16.66■□□□□ 0.26
USP5-201ENST00000229268 SLIT3O75094 1523 aa16.66■□□□□ 0.26
USP5-201ENST00000229268 ZCRB1Q8TBF4 217 aaKnown RBP16.66■□□□□ 0.26
USP5-201ENST00000229268 SYTL4Q96C24 671 aaPredicted RBP16.66■□□□□ 0.26
USP5-201ENST00000229268 USP44Q9H0E7 712 aa16.66■□□□□ 0.26
USP5-201ENST00000229268 DNAAF4Q8WXU2 420 aa16.65■□□□□ 0.26
USP5-201ENST00000229268 DBF4Q9UBU7 674 aaPredicted RBP16.65■□□□□ 0.26
USP5-201ENST00000229268 STRCQ7RTU9 1775 aa16.65■□□□□ 0.26
USP5-201ENST00000229268 RPAP2Q8IXW5 612 aaPredicted RBP16.65■□□□□ 0.26
USP5-201ENST00000229268 IL1RAPL2Q9NP60 686 aa16.65■□□□□ 0.26
USP5-201ENST00000229268 DCTPP1Q9H773 170 aa16.65■□□□□ 0.26
USP5-201ENST00000229268 C9orf78Q9NZ63 289 aaPredicted RBP16.65■□□□□ 0.26
USP5-201ENST00000229268 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.64■□□□□ 0.25
USP5-201ENST00000229268 TRPM3Q9HCF6 1732 aaPredicted RBP16.64■□□□□ 0.25
USP5-201ENST00000229268 HMMRO75330 724 aa16.63■□□□□ 0.25
USP5-201ENST00000229268 RIC3Q7Z5B4 369 aa16.63■□□□□ 0.25
USP5-201ENST00000229268 IL27Q8NEV9 243 aa16.63■□□□□ 0.25
USP5-201ENST00000229268 CCDC9Q9Y3X0 531 aaKnown RBP16.63■□□□□ 0.25
USP5-201ENST00000229268 GNAI3P08754 354 aa16.63■□□□□ 0.25
USP5-201ENST00000229268 WDR17Q8IZU2 1322 aa16.62■□□□□ 0.25
USP5-201ENST00000229268 NCOA3Q9Y6Q9 1424 aa16.62■□□□□ 0.25
USP5-201ENST00000229268 DCAF5Q96JK2 942 aa16.62■□□□□ 0.25
USP5-201ENST00000229268 BABAM1Q9NWV8 329 aa16.62■□□□□ 0.25
USP5-201ENST00000229268 COPS6Q7L5N1 327 aa16.62■□□□□ 0.25
USP5-201ENST00000229268 KIF1AQ12756 1690 aa16.61■□□□□ 0.25
USP5-201ENST00000229268 SRGAP3O43295 1099 aa16.61■□□□□ 0.25
USP5-201ENST00000229268 IL2RBP14784 551 aa16.61■□□□□ 0.25
USP5-201ENST00000229268 DDRGK1Q96HY6 314 aa16.61■□□□□ 0.25
USP5-201ENST00000229268 SURF6O75683 361 aaKnown RBP16.61■□□□□ 0.25
USP5-201ENST00000229268 XAGE3Q8WTP9 111 aa16.61■□□□□ 0.25
USP5-201ENST00000229268 SLKQ9H2G2 1235 aaPredicted RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms