RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 RTF1Q92541 710 aaKnown RBP31.15■■■□□ 2.58
HOMER3-201ENST00000221222 SIPA1L3O60292 1781 aaPredicted RBP31.14■■■□□ 2.58
HOMER3-201ENST00000221222 APAF1O14727 1248 aa31.14■■■□□ 2.58
HOMER3-201ENST00000221222 PLSCR1O15162 318 aa31.14■■■□□ 2.58
HOMER3-201ENST00000221222 RIPK4P57078 832 aa31.14■■■□□ 2.58
HOMER3-201ENST00000221222 TMOD3Q9NYL9 352 aa31.13■■■□□ 2.57
HOMER3-201ENST00000221222 CABP4P57796 275 aa31.12■■■□□ 2.57
HOMER3-201ENST00000221222 PIGBQ92521 554 aa31.12■■■□□ 2.57
HOMER3-201ENST00000221222 SLC52A2Q9HAB3 445 aa31.11■■■□□ 2.57
HOMER3-201ENST00000221222 ANO8Q9HCE9 1232 aaPredicted RBP31.11■■■□□ 2.57
HOMER3-201ENST00000221222 RRP7AQ9Y3A4 280 aaKnown RBP31.11■■■□□ 2.57
HOMER3-201ENST00000221222 LMOD3Q0VAK6 560 aa31.1■■■□□ 2.57
HOMER3-201ENST00000221222 MCM10Q7L590 875 aa31.09■■■□□ 2.57
HOMER3-201ENST00000221222 NFATC2IPQ8NCF5 419 aa31.08■■■□□ 2.57
HOMER3-201ENST00000221222 DCTN1Q14203 1278 aa31.07■■■□□ 2.56
HOMER3-201ENST00000221222 NEUROD2Q15784 382 aa31.07■■■□□ 2.56
HOMER3-201ENST00000221222 PROM2Q8N271 834 aa31.07■■■□□ 2.56
HOMER3-201ENST00000221222 TRIM35Q9UPQ4 493 aa31.06■■■□□ 2.56
HOMER3-201ENST00000221222 PAPPAQ13219 1627 aa31.06■■■□□ 2.56
HOMER3-201ENST00000221222 LY75O60449 1722 aa31.05■■■□□ 2.56
HOMER3-201ENST00000221222 TEFQ10587 303 aa31.05■■■□□ 2.56
HOMER3-201ENST00000221222 NCBP3Q53F19 620 aaKnown RBP31.05■■■□□ 2.56
HOMER3-201ENST00000221222 TXNRD1Q16881 649 aa31.03■■■□□ 2.56
HOMER3-201ENST00000221222 CCDC27Q2M243 656 aa31.01■■■□□ 2.55
HOMER3-201ENST00000221222 SMARCC1Q92922 1105 aaPredicted RBP31.01■■■□□ 2.55
HOMER3-201ENST00000221222 THUMPD2Q9BTF0 503 aaKnown RBP31.01■■■□□ 2.55
HOMER3-201ENST00000221222 SPON1Q9HCB6 807 aa31.01■■■□□ 2.55
HOMER3-201ENST00000221222 ATG3Q9NT62 314 aa31■■■□□ 2.55
HOMER3-201ENST00000221222 ASAP1Q9ULH1 1129 aa31■■■□□ 2.55
HOMER3-201ENST00000221222 PALLDQ8WX93 1383 aa31■■■□□ 2.55
HOMER3-201ENST00000221222 NGEFQ8N5V2 710 aa30.99■■■□□ 2.55
HOMER3-201ENST00000221222 PDGFDQ9GZP0 370 aaPredicted RBP30.99■■■□□ 2.55
HOMER3-201ENST00000221222 PPP1R1BQ9UD71 204 aaPredicted RBP30.98■■■□□ 2.55
HOMER3-201ENST00000221222 UBR2Q8IWV8 1755 aa30.98■■■□□ 2.55
HOMER3-201ENST00000221222 TAF7Q15545 349 aaPredicted RBP30.97■■■□□ 2.55
HOMER3-201ENST00000221222 CASZ1Q86V15 1759 aa30.97■■■□□ 2.55
HOMER3-201ENST00000221222 ZNF831Q5JPB2 1677 aa30.96■■■□□ 2.55
HOMER3-201ENST00000221222 STK32BQ9NY57 414 aa30.95■■■□□ 2.55
HOMER3-201ENST00000221222 KDM3BQ7LBC6 1761 aa30.95■■■□□ 2.54
HOMER3-201ENST00000221222 SENP3-EIF4A1A0A087X0R7 540 aa30.93■■■□□ 2.54
HOMER3-201ENST00000221222 BTBD11A6QL63 1104 aa30.93■■■□□ 2.54
HOMER3-201ENST00000221222 KCPQ6ZWJ8 1503 aa30.93■■■□□ 2.54
HOMER3-201ENST00000221222 WWC1Q8IX03 1113 aa30.92■■■□□ 2.54
HOMER3-201ENST00000221222 ZBTB7AO95365 584 aa30.92■■■□□ 2.54
HOMER3-201ENST00000221222 SLC39A6Q13433 755 aa30.92■■■□□ 2.54
HOMER3-201ENST00000221222 ZNF790Q6PG37 636 aa30.92■■■□□ 2.54
HOMER3-201ENST00000221222 CICQ96RK0 1608 aaPredicted RBP30.91■■■□□ 2.54
HOMER3-201ENST00000221222 CALD1Q05682 793 aaKnown RBP30.91■■■□□ 2.54
HOMER3-201ENST00000221222 SLC27A3Q5K4L6 730 aa30.91■■■□□ 2.54
HOMER3-201ENST00000221222 BABAM1Q9NWV8 329 aa30.91■■■□□ 2.54
HOMER3-201ENST00000221222 SLC15A2Q16348 729 aa30.9■■■□□ 2.54
HOMER3-201ENST00000221222 LOC102724428A0A0B4J2F2 783 aa30.89■■■□□ 2.54
HOMER3-201ENST00000221222 SIK1P57059 783 aa30.89■■■□□ 2.54
HOMER3-201ENST00000221222 TTC5Q8N0Z6 440 aa30.89■■■□□ 2.54
HOMER3-201ENST00000221222 TAF1LQ8IZX4 1826 aa30.88■■■□□ 2.53
HOMER3-201ENST00000221222 CCNL1Q9UK58 526 aaPredicted RBP30.88■■■□□ 2.53
HOMER3-201ENST00000221222 LRRC4BQ9NT99 713 aa30.87■■■□□ 2.53
HOMER3-201ENST00000221222 ATF5Q9Y2D1 282 aaPredicted RBP30.87■■■□□ 2.53
HOMER3-201ENST00000221222 SALL2Q9Y467 1007 aaPredicted RBP30.87■■■□□ 2.53
HOMER3-201ENST00000221222 MIS18AQ9NYP9 233 aa30.86■■■□□ 2.53
HOMER3-201ENST00000221222 C5P01031 1676 aa30.86■■■□□ 2.53
HOMER3-201ENST00000221222 CHL1O00533 1208 aa30.85■■■□□ 2.53
HOMER3-201ENST00000221222 PTCD1O75127 700 aaKnown RBP30.85■■■□□ 2.53
HOMER3-201ENST00000221222 CFAP44Q96MT7 982 aa30.85■■■□□ 2.53
HOMER3-201ENST00000221222 SLC4A9Q96Q91 983 aa30.85■■■□□ 2.53
HOMER3-201ENST00000221222 RBM42Q9BTD8 480 aaKnown RBP30.85■■■□□ 2.53
HOMER3-201ENST00000221222 TJP1Q07157 1748 aa30.84■■■□□ 2.53
HOMER3-201ENST00000221222 KCNQ3O43525 872 aa30.84■■■□□ 2.53
HOMER3-201ENST00000221222 ZNF853P0CG23 659 aa30.84■■■□□ 2.53
HOMER3-201ENST00000221222 WDR63Q8IWG1 891 aa30.84■■■□□ 2.53
HOMER3-201ENST00000221222 IL16Q14005 1332 aa30.84■■■□□ 2.53
HOMER3-201ENST00000221222 ZNF521Q96K83 1311 aa30.84■■■□□ 2.53
HOMER3-201ENST00000221222 IFT57Q9NWB7 429 aa30.83■■■□□ 2.53
HOMER3-201ENST00000221222 TSPYL4Q9UJ04 414 aa30.83■■■□□ 2.53
HOMER3-201ENST00000221222 COL5A3P25940 1745 aaPredicted RBP30.83■■■□□ 2.53
HOMER3-201ENST00000221222 VSIG10Q8N0Z9 540 aa30.82■■■□□ 2.52
HOMER3-201ENST00000221222 ZNF496Q96IT1 587 aaPredicted RBP30.82■■■□□ 2.52
HOMER3-201ENST00000221222 HMGB2P26583 209 aaKnown RBP30.81■■■□□ 2.52
HOMER3-201ENST00000221222 ATP6V1AP38606 617 aa30.81■■■□□ 2.52
HOMER3-201ENST00000221222 KCNQ4P56696 695 aa30.81■■■□□ 2.52
HOMER3-201ENST00000221222 GNAI1P63096 354 aa30.81■■■□□ 2.52
HOMER3-201ENST00000221222 FMNL2Q96PY5 1086 aa30.81■■■□□ 2.52
HOMER3-201ENST00000221222 HEG1Q9ULI3 1381 aa30.81■■■□□ 2.52
HOMER3-201ENST00000221222 ZNF827Q17R98 1081 aa30.79■■■□□ 2.52
HOMER3-201ENST00000221222 LAS1LQ9Y4W2 734 aaKnown RBP30.79■■■□□ 2.52
HOMER3-201ENST00000221222 ITPK1Q13572 414 aa30.79■■■□□ 2.52
HOMER3-201ENST00000221222 PTGER2P43116 358 aa30.78■■■□□ 2.52
HOMER3-201ENST00000221222 EIF4A1P60842 406 aaKnown RBP30.78■■■□□ 2.52
HOMER3-201ENST00000221222 C4BP0C0L5 1744 aa30.77■■■□□ 2.52
HOMER3-201ENST00000221222 MBIPQ9NS73 344 aa30.76■■■□□ 2.51
HOMER3-201ENST00000221222 LINC00116Q8NCU8 138 aa30.75■■■□□ 2.51
HOMER3-201ENST00000221222 HNRNPUQ00839 825 aaKnown RBP eCLIP30.74■■■□□ 2.51
HOMER3-201ENST00000221222 LAMB4A4D0S4 1761 aa30.73■■■□□ 2.51
HOMER3-201ENST00000221222 MTFR1LQ9H019 292 aa30.73■■■□□ 2.51
HOMER3-201ENST00000221222 SNRPA1P09661 255 aaKnown RBP30.72■■■□□ 2.51
HOMER3-201ENST00000221222 DNAJC10Q8IXB1 793 aa30.72■■■□□ 2.51
HOMER3-201ENST00000221222 TEX13AQ9BXU3 409 aaPredicted RBP30.72■■■□□ 2.51
HOMER3-201ENST00000221222 AKT1S1Q96B36 256 aa30.71■■■□□ 2.51
HOMER3-201ENST00000221222 MYH14Q7Z406 1995 aaKnown RBP30.7■■■□□ 2.51
HOMER3-201ENST00000221222 CNTNAP4Q9C0A0 1308 aa30.69■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms