RNA–Protein interactions for RNA: ENST00000221166.9

NEFM-201, Transcript of neurofilament medium, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEFM, Length 4,020 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-201ENST00000221166 MBD3O95983 291 aa13.55□□□□□ -0.24
NEFM-201ENST00000221166 DDX54Q8TDD1 881 aaKnown RBP13.55□□□□□ -0.24
NEFM-201ENST00000221166 ATP7BP35670 1465 aa13.54□□□□□ -0.24
NEFM-201ENST00000221166 SIGLEC1Q9BZZ2 1709 aa13.54□□□□□ -0.24
NEFM-201ENST00000221166 MCM2P49736 904 aa13.54□□□□□ -0.24
NEFM-201ENST00000221166 ZNF445P59923 1031 aa13.54□□□□□ -0.24
NEFM-201ENST00000221166 EYA1Q99502 592 aa13.54□□□□□ -0.24
NEFM-201ENST00000221166 TPM2P07951 284 aa13.54□□□□□ -0.24
NEFM-201ENST00000221166 TSPY26PQ9H489 355 aa13.54□□□□□ -0.24
NEFM-201ENST00000221166 ZDHHC9Q9Y397 364 aa13.54□□□□□ -0.24
NEFM-201ENST00000221166 CHMP3Q9Y3E7 222 aa13.54□□□□□ -0.24
NEFM-201ENST00000221166 AATKQ6ZMQ8 1374 aa13.54□□□□□ -0.24
NEFM-201ENST00000221166 RRP9O43818 475 aaKnown RBP13.54□□□□□ -0.24
NEFM-201ENST00000221166 EID1Q9Y6B2 187 aa13.54□□□□□ -0.24
NEFM-201ENST00000221166 SRGAP3O43295 1099 aa13.53□□□□□ -0.24
NEFM-201ENST00000221166 CHMLP26374 656 aa13.53□□□□□ -0.24
NEFM-201ENST00000221166 PPP1R9BQ96SB3 815 aa13.53□□□□□ -0.24
NEFM-201ENST00000221166 CFAP74Q9C0B2 1584 aa13.53□□□□□ -0.24
NEFM-201ENST00000221166 ANXA1P04083 346 aa13.53□□□□□ -0.24
NEFM-201ENST00000221166 CEBPAP49715 358 aaPredicted RBP13.53□□□□□ -0.24
NEFM-201ENST00000221166 LRSAM1Q6UWE0 723 aa13.53□□□□□ -0.24
NEFM-201ENST00000221166 CWC27Q6UX04 472 aaKnown RBP13.53□□□□□ -0.24
NEFM-201ENST00000221166 GNAT3A8MTJ3 354 aa13.53□□□□□ -0.24
NEFM-201ENST00000221166 ATP8B2P98198 1209 aa13.53□□□□□ -0.24
NEFM-201ENST00000221166 DIP2CQ9Y2E4 1556 aa13.52□□□□□ -0.24
NEFM-201ENST00000221166 KIF24Q5T7B8 1368 aa13.52□□□□□ -0.24
NEFM-201ENST00000221166 UNC5CLQ8IV45 518 aa13.52□□□□□ -0.24
NEFM-201ENST00000221166 FIBPO43427 364 aa13.52□□□□□ -0.25
NEFM-201ENST00000221166 CDK12Q9NYV4 1490 aaPredicted RBP13.52□□□□□ -0.25
NEFM-201ENST00000221166 ABTB2Q8N961 1025 aa13.52□□□□□ -0.25
NEFM-201ENST00000221166 PPP1R42Q7Z4L9 355 aa13.51□□□□□ -0.25
NEFM-201ENST00000221166 PHAXQ9H814 394 aaKnown RBP13.51□□□□□ -0.25
NEFM-201ENST00000221166 SPG7Q9UQ90 795 aa13.51□□□□□ -0.25
NEFM-201ENST00000221166 AK9Q5TCS8 1911 aa13.51□□□□□ -0.25
NEFM-201ENST00000221166 DIAPH3Q9NSV4 1193 aa13.51□□□□□ -0.25
NEFM-201ENST00000221166 SMC3Q9UQE7 1217 aa13.51□□□□□ -0.25
NEFM-201ENST00000221166 SRCIN1Q9C0H9 1055 aa13.51□□□□□ -0.25
NEFM-201ENST00000221166 CCDC39Q9UFE4 941 aa13.51□□□□□ -0.25
NEFM-201ENST00000221166 CPS1P31327 1500 aa13.5□□□□□ -0.25
NEFM-201ENST00000221166 PHF14O94880 888 aa13.5□□□□□ -0.25
NEFM-201ENST00000221166 AMOTL2Q9Y2J4 779 aa13.5□□□□□ -0.25
NEFM-201ENST00000221166 KIAA0232Q92628 1395 aa13.5□□□□□ -0.25
NEFM-201ENST00000221166 CPSF1Q10570 1443 aaKnown RBP13.5□□□□□ -0.25
NEFM-201ENST00000221166 VPS37CA5D8V6 355 aaPredicted RBP13.5□□□□□ -0.25
NEFM-201ENST00000221166 GADD45BO75293 160 aaPredicted RBP13.5□□□□□ -0.25
NEFM-201ENST00000221166 ATP10DQ9P241 1426 aa13.5□□□□□ -0.25
NEFM-201ENST00000221166 CYP2E1P05181 493 aaPredicted RBP13.49□□□□□ -0.25
NEFM-201ENST00000221166 CPA1P15085 419 aa13.49□□□□□ -0.25
NEFM-201ENST00000221166 KIAA2012Q0VF49 1180 aa13.49□□□□□ -0.25
NEFM-201ENST00000221166 CLEC17AQ6ZS10 378 aa13.49□□□□□ -0.25
NEFM-201ENST00000221166 OFD1O75665 1012 aa13.49□□□□□ -0.25
NEFM-201ENST00000221166 USP48Q86UV5 1035 aa13.49□□□□□ -0.25
NEFM-201ENST00000221166 MAP2P11137 1827 aaKnown RBP13.49□□□□□ -0.25
NEFM-201ENST00000221166 WDR33Q9C0J8 1336 aaKnown RBP13.49□□□□□ -0.25
NEFM-201ENST00000221166 TAF7Q15545 349 aaPredicted RBP13.49□□□□□ -0.25
NEFM-201ENST00000221166 ZNF830Q96NB3 372 aaPredicted RBP13.49□□□□□ -0.25
NEFM-201ENST00000221166 C9orf78Q9NZ63 289 aaPredicted RBP13.49□□□□□ -0.25
NEFM-201ENST00000221166 A2ML1A8K2U0 1454 aa13.49□□□□□ -0.25
NEFM-201ENST00000221166 TEFQ10587 303 aa13.48□□□□□ -0.25
NEFM-201ENST00000221166 RBM33Q96EV2 1170 aaKnown RBP13.48□□□□□ -0.25
NEFM-201ENST00000221166 UQCRHLA0A096LP55 91 aa13.48□□□□□ -0.25
NEFM-201ENST00000221166 UQCRHP07919 91 aa13.48□□□□□ -0.25
NEFM-201ENST00000221166 CNTROBQ8N137 903 aa13.48□□□□□ -0.25
NEFM-201ENST00000221166 ROBO2Q9HCK4 1378 aa13.48□□□□□ -0.25
NEFM-201ENST00000221166 PPP6R1Q9UPN7 881 aa13.48□□□□□ -0.25
NEFM-201ENST00000221166 BRD1O95696 1058 aa13.47□□□□□ -0.25
NEFM-201ENST00000221166 CNPY2Q9Y2B0 182 aa13.47□□□□□ -0.25
NEFM-201ENST00000221166 MYO5BQ9ULV0 1848 aa13.47□□□□□ -0.25
NEFM-201ENST00000221166 RHPN1Q8TCX5 695 aa13.47□□□□□ -0.25
NEFM-201ENST00000221166 USP25Q9UHP3 1055 aa13.47□□□□□ -0.25
NEFM-201ENST00000221166 TMEM131LA2VDJ0 1609 aa13.47□□□□□ -0.25
NEFM-201ENST00000221166 IFIT2P09913 472 aaKnown RBP13.47□□□□□ -0.25
NEFM-201ENST00000221166 CASTP20810 708 aaKnown RBP13.47□□□□□ -0.25
NEFM-201ENST00000221166 USP44Q9H0E7 712 aa13.47□□□□□ -0.25
NEFM-201ENST00000221166 AIMP1Q12904 312 aaKnown RBP13.46□□□□□ -0.25
NEFM-201ENST00000221166 CCDC83Q8IWF9 413 aa13.46□□□□□ -0.25
NEFM-201ENST00000221166 OSBPL3Q9H4L5 887 aa13.46□□□□□ -0.25
NEFM-201ENST00000221166 PI4KAP2A4QPH2 592 aa13.46□□□□□ -0.25
NEFM-201ENST00000221166 PI4KAP1Q8N8J0 262 aa13.46□□□□□ -0.25
NEFM-201ENST00000221166 NOL7Q9UMY1 257 aaKnown RBP13.46□□□□□ -0.25
NEFM-201ENST00000221166 ZKSCAN5Q9Y2L8 839 aa13.46□□□□□ -0.25
NEFM-201ENST00000221166 LTKP29376 864 aa13.46□□□□□ -0.26
NEFM-201ENST00000221166 GOLGA6L4A6NEF3 574 aa13.45□□□□□ -0.26
NEFM-201ENST00000221166 CSPP1Q1MSJ5 1256 aa13.45□□□□□ -0.26
NEFM-201ENST00000221166 IL17REQ8NFR9 667 aa13.45□□□□□ -0.26
NEFM-201ENST00000221166 JAKMIP1Q96N16 626 aaKnown RBP13.45□□□□□ -0.26
NEFM-201ENST00000221166 CLASRPQ8N2M8 674 aaKnown RBP13.45□□□□□ -0.26
NEFM-201ENST00000221166 CCDC9Q9Y3X0 531 aaKnown RBP13.45□□□□□ -0.26
NEFM-201ENST00000221166 PLEKHG3A1L390 1219 aa13.45□□□□□ -0.26
NEFM-201ENST00000221166 PRPF40BQ6NWY9 871 aaKnown RBP13.45□□□□□ -0.26
NEFM-201ENST00000221166 KIF1BPQ96EK5 621 aa13.45□□□□□ -0.26
NEFM-201ENST00000221166 ANAPC15P60006 121 aa13.44□□□□□ -0.26
NEFM-201ENST00000221166 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.44□□□□□ -0.26
NEFM-201ENST00000221166 NBPF7P0C2Y1 421 aaPredicted RBP13.44□□□□□ -0.26
NEFM-201ENST00000221166 HCLS1P14317 486 aaPredicted RBP13.44□□□□□ -0.26
NEFM-201ENST00000221166 FLT4P35916 1363 aa13.44□□□□□ -0.26
NEFM-201ENST00000221166 IBTKQ9P2D0 1353 aaPredicted RBP13.44□□□□□ -0.26
NEFM-201ENST00000221166 CHPF2Q9P2E5 772 aa13.44□□□□□ -0.26
NEFM-201ENST00000221166 TNRQ92752 1358 aa13.44□□□□□ -0.26
NEFM-201ENST00000221166 AK2P54819 239 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms