RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 SBNO1A3KN83 1393 aa21.21■□□□□ 0.99
USB1-201ENST00000219281 RGPD1P0DJD0 1748 aa21.21■□□□□ 0.99
USB1-201ENST00000219281 REC8O95072 547 aa21.21■□□□□ 0.99
USB1-201ENST00000219281 ZNF142P52746 1687 aaPredicted RBP21.21■□□□□ 0.99
USB1-201ENST00000219281 MTHFSDQ2M296 383 aaKnown RBP21.21■□□□□ 0.99
USB1-201ENST00000219281 ZGPATQ8N5A5 531 aaKnown RBP21.21■□□□□ 0.99
USB1-201ENST00000219281 FLT4P35916 1363 aa21.2■□□□□ 0.98
USB1-201ENST00000219281 ERC2O15083 957 aa21.2■□□□□ 0.98
USB1-201ENST00000219281 RTF1Q92541 710 aaKnown RBP21.2■□□□□ 0.98
USB1-201ENST00000219281 CWC22Q9HCG8 908 aaKnown RBP21.2■□□□□ 0.98
USB1-201ENST00000219281 AK9Q5TCS8 1911 aa21.2■□□□□ 0.98
USB1-201ENST00000219281 NCLP19338 710 aaKnown RBP21.2■□□□□ 0.98
USB1-201ENST00000219281 NASPP49321 788 aaPredicted RBP21.19■□□□□ 0.98
USB1-201ENST00000219281 AMPHP49418 695 aa21.19■□□□□ 0.98
USB1-201ENST00000219281 EYA1Q99502 592 aa21.19■□□□□ 0.98
USB1-201ENST00000219281 CCT4P50991 539 aaKnown RBP21.18■□□□□ 0.98
USB1-201ENST00000219281 PDE1AP54750 535 aa21.18■□□□□ 0.98
USB1-201ENST00000219281 ABTB2Q8N961 1025 aa21.18■□□□□ 0.98
USB1-201ENST00000219281 LMBRD1Q9NUN5 540 aa21.18■□□□□ 0.98
USB1-201ENST00000219281 PHF8Q9UPP1 1060 aa21.18■□□□□ 0.98
USB1-201ENST00000219281 OSBPL3Q9H4L5 887 aa21.17■□□□□ 0.98
USB1-201ENST00000219281 ARHGEF10O15013 1369 aa21.17■□□□□ 0.98
USB1-201ENST00000219281 IBTKQ9P2D0 1353 aaPredicted RBP21.17■□□□□ 0.98
USB1-201ENST00000219281 CCDC173Q0VFZ6 552 aa21.16■□□□□ 0.98
USB1-201ENST00000219281 CAVIN1Q6NZI2 390 aaKnown RBP21.16■□□□□ 0.98
USB1-201ENST00000219281 EXOC6BQ9Y2D4 811 aa21.16■□□□□ 0.98
USB1-201ENST00000219281 GNAI2P04899 355 aa21.16■□□□□ 0.98
USB1-201ENST00000219281 TSHZ3Q63HK5 1081 aa21.16■□□□□ 0.98
USB1-201ENST00000219281 KDRP35968 1356 aa21.16■□□□□ 0.98
USB1-201ENST00000219281 IGSF1Q8N6C5 1336 aa21.15■□□□□ 0.98
USB1-201ENST00000219281 ZDHHC9Q9Y397 364 aa21.15■□□□□ 0.98
USB1-201ENST00000219281 HOXC9P31274 260 aa21.14■□□□□ 0.97
USB1-201ENST00000219281 ZNF445P59923 1031 aa21.14■□□□□ 0.97
USB1-201ENST00000219281 PPP1R9BQ96SB3 815 aa21.14■□□□□ 0.97
USB1-201ENST00000219281 MARF1Q9Y4F3 1742 aaKnown RBP21.14■□□□□ 0.97
USB1-201ENST00000219281 NPHP4O75161 1426 aaPredicted RBP21.14■□□□□ 0.97
USB1-201ENST00000219281 ZSCAN23Q3MJ62 389 aa21.13■□□□□ 0.97
USB1-201ENST00000219281 PRPF40AO75400 957 aaKnown RBP21.13■□□□□ 0.97
USB1-201ENST00000219281 ANP32BQ92688 251 aaKnown RBP21.13■□□□□ 0.97
USB1-201ENST00000219281 STK31Q9BXU1 1019 aa21.13■□□□□ 0.97
USB1-201ENST00000219281 NEK4P51957 841 aa21.12■□□□□ 0.97
USB1-201ENST00000219281 ESCO1Q5FWF5 840 aa21.12■□□□□ 0.97
USB1-201ENST00000219281 ADGRL3Q9HAR2 1447 aa21.12■□□□□ 0.97
USB1-201ENST00000219281 LRRCC1Q9C099 1032 aa21.11■□□□□ 0.97
USB1-201ENST00000219281 NECTIN2Q92692 538 aa21.11■□□□□ 0.97
USB1-201ENST00000219281 CHAMP1Q96JM3 812 aa21.1■□□□□ 0.97
USB1-201ENST00000219281 SALL3Q9BXA9 1300 aa21.1■□□□□ 0.97
USB1-201ENST00000219281 PNMA6EA0A0J9YXQ4 647 aa21.09■□□□□ 0.97
USB1-201ENST00000219281 FLIIQ13045 1269 aa21.09■□□□□ 0.97
USB1-201ENST00000219281 FKBP5Q13451 457 aaPredicted RBP21.09■□□□□ 0.97
USB1-201ENST00000219281 C14orf37Q86TY3 774 aa21.09■□□□□ 0.97
USB1-201ENST00000219281 ESYT1Q9BSJ8 1104 aa21.09■□□□□ 0.97
USB1-201ENST00000219281 FOXD4L5Q5VV16 416 aaPredicted RBP21.09■□□□□ 0.97
USB1-201ENST00000219281 GPT2Q8TD30 523 aa21.09■□□□□ 0.97
USB1-201ENST00000219281 FOXD4L4Q8WXT5 416 aaPredicted RBP21.09■□□□□ 0.97
USB1-201ENST00000219281 RBM27Q9P2N5 1060 aaKnown RBP21.09■□□□□ 0.97
USB1-201ENST00000219281 MX1P20591 662 aa21.08■□□□□ 0.97
USB1-201ENST00000219281 TMX3Q96JJ7 454 aa21.08■□□□□ 0.97
USB1-201ENST00000219281 GNAI3P08754 354 aa21.08■□□□□ 0.96
USB1-201ENST00000219281 ATP8B2P98198 1209 aa21.08■□□□□ 0.96
USB1-201ENST00000219281 RILPL2Q969X0 211 aa21.08■□□□□ 0.96
USB1-201ENST00000219281 USP54Q70EL1 1684 aa21.07■□□□□ 0.96
USB1-201ENST00000219281 TRIM6-TRIM34B2RNG4 842 aa21.07■□□□□ 0.96
USB1-201ENST00000219281 PSME1Q06323 249 aa21.07■□□□□ 0.96
USB1-201ENST00000219281 CCDC30Q5VVM6 783 aa21.07■□□□□ 0.96
USB1-201ENST00000219281 ORAI2Q96SN7 254 aa21.07■□□□□ 0.96
USB1-201ENST00000219281 RBSNQ9H1K0 784 aa21.07■□□□□ 0.96
USB1-201ENST00000219281 PRIM1P49642 420 aaKnown RBP21.06■□□□□ 0.96
USB1-201ENST00000219281 LTV1Q96GA3 475 aaPredicted RBP21.06■□□□□ 0.96
USB1-201ENST00000219281 PALD1Q9ULE6 856 aa21.06■□□□□ 0.96
USB1-201ENST00000219281 NWD1Q149M9 1564 aa21.06■□□□□ 0.96
USB1-201ENST00000219281 MCCP23508 829 aa21.05■□□□□ 0.96
USB1-201ENST00000219281 CHMLP26374 656 aa21.05■□□□□ 0.96
USB1-201ENST00000219281 ZSCAN30Q86W11 494 aa21.04■□□□□ 0.96
USB1-201ENST00000219281 ANO2Q9NQ90 1003 aa21.04■□□□□ 0.96
USB1-201ENST00000219281 LRRFIP2Q9Y608 721 aaKnown RBP21.04■□□□□ 0.96
USB1-201ENST00000219281 GNAT3A8MTJ3 354 aa21.04■□□□□ 0.96
USB1-201ENST00000219281 HTATSF1O43719 755 aaKnown RBP21.04■□□□□ 0.96
USB1-201ENST00000219281 NOL8Q76FK4 1167 aaKnown RBP21.04■□□□□ 0.96
USB1-201ENST00000219281 MCM2P49736 904 aa21.03■□□□□ 0.96
USB1-201ENST00000219281 UBE2Q2Q8WVN8 375 aa21.03■□□□□ 0.96
USB1-201ENST00000219281 NSFL1CQ9UNZ2 370 aaKnown RBP21.03■□□□□ 0.96
USB1-201ENST00000219281 UNC5CLQ8IV45 518 aa21.02■□□□□ 0.96
USB1-201ENST00000219281 IP6K1Q92551 441 aa21.02■□□□□ 0.96
USB1-201ENST00000219281 TMEM63CQ9P1W3 806 aa21.02■□□□□ 0.96
USB1-201ENST00000219281 STAP2Q9UGK3 403 aa21.02■□□□□ 0.95
USB1-201ENST00000219281 XPCQ01831 940 aaPredicted RBP21.01■□□□□ 0.95
USB1-201ENST00000219281 CUL4AQ13619 759 aa21.01■□□□□ 0.95
USB1-201ENST00000219281 BRD1O95696 1058 aa21.01■□□□□ 0.95
USB1-201ENST00000219281 USHBP1Q8N6Y0 703 aa21.01■□□□□ 0.95
USB1-201ENST00000219281 ANAPC15P60006 121 aa21■□□□□ 0.95
USB1-201ENST00000219281 IL17REQ8NFR9 667 aa21■□□□□ 0.95
USB1-201ENST00000219281 SRCIN1Q9C0H9 1055 aa21■□□□□ 0.95
USB1-201ENST00000219281 USP44Q9H0E7 712 aa21■□□□□ 0.95
USB1-201ENST00000219281 NFAT5O94916 1531 aa21■□□□□ 0.95
USB1-201ENST00000219281 SYCE3A1L190 88 aa20.99■□□□□ 0.95
USB1-201ENST00000219281 MSNP26038 577 aaKnown RBP20.99■□□□□ 0.95
USB1-201ENST00000219281 PROSER2Q86WR7 435 aaPredicted RBP20.99■□□□□ 0.95
USB1-201ENST00000219281 IL1RAPL2Q9NP60 686 aa20.99■□□□□ 0.95
USB1-201ENST00000219281 LRSAM1Q6UWE0 723 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms