RNA–Protein interactions for RNA: ENST00000218388.8

TIMP1-201, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP1, Length 892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-201ENST00000218388 NFATC2IPQ8NCF5 419 aa17.19■□□□□ 0.34
TIMP1-201ENST00000218388 BCL11BQ9C0K0 894 aaPredicted RBP17.19■□□□□ 0.34
TIMP1-201ENST00000218388 IL16Q14005 1332 aa17.19■□□□□ 0.34
TIMP1-201ENST00000218388 ZBED9Q6R2W3 1325 aa17.19■□□□□ 0.34
TIMP1-201ENST00000218388 BABAM1Q9NWV8 329 aa17.18■□□□□ 0.34
TIMP1-201ENST00000218388 BTAF1O14981 1849 aa17.17■□□□□ 0.34
TIMP1-201ENST00000218388 BTBD11A6QL63 1104 aa17.17■□□□□ 0.34
TIMP1-201ENST00000218388 TRIM37O94972 964 aa17.17■□□□□ 0.34
TIMP1-201ENST00000218388 GNAI1P63096 354 aa17.17■□□□□ 0.34
TIMP1-201ENST00000218388 ILDR2Q71H61 639 aa17.17■□□□□ 0.34
TIMP1-201ENST00000218388 PIGBQ92521 554 aa17.17■□□□□ 0.34
TIMP1-201ENST00000218388 IFT57Q9NWB7 429 aa17.17■□□□□ 0.34
TIMP1-201ENST00000218388 ZNF521Q96K83 1311 aa17.17■□□□□ 0.34
TIMP1-201ENST00000218388 KCNQ2O43526 872 aa17.16■□□□□ 0.34
TIMP1-201ENST00000218388 TTC5Q8N0Z6 440 aa17.16■□□□□ 0.34
TIMP1-201ENST00000218388 CFAP44Q96MT7 982 aa17.16■□□□□ 0.34
TIMP1-201ENST00000218388 LAS1LQ9Y4W2 734 aaKnown RBP17.16■□□□□ 0.34
TIMP1-201ENST00000218388 PAPPAQ13219 1627 aa17.15■□□□□ 0.34
TIMP1-201ENST00000218388 GOLGA2Q08379 1002 aa17.15■□□□□ 0.34
TIMP1-201ENST00000218388 SF3B2Q13435 895 aaKnown RBP17.15■□□□□ 0.34
TIMP1-201ENST00000218388 SMARCC1Q92922 1105 aaPredicted RBP17.15■□□□□ 0.34
TIMP1-201ENST00000218388 YTHDC1Q96MU7 727 aaKnown RBP17.15■□□□□ 0.34
TIMP1-201ENST00000218388 TSPYL4Q9UJ04 414 aa17.15■□□□□ 0.34
TIMP1-201ENST00000218388 TNS1Q9HBL0 1735 aaKnown RBP17.14■□□□□ 0.33
TIMP1-201ENST00000218388 KDM3BQ7LBC6 1761 aa17.14■□□□□ 0.33
TIMP1-201ENST00000218388 CCDC125Q86Z20 511 aa17.13■□□□□ 0.33
TIMP1-201ENST00000218388 MYH16Q9H6N6 1097 aa17.13■□□□□ 0.33
TIMP1-201ENST00000218388 E9PSI1 815 aa17.12■□□□□ 0.33
TIMP1-201ENST00000218388 CHL1O00533 1208 aa17.12■□□□□ 0.33
TIMP1-201ENST00000218388 ZNF790Q6PG37 636 aa17.12■□□□□ 0.33
TIMP1-201ENST00000218388 UBR2Q8IWV8 1755 aa17.11■□□□□ 0.33
TIMP1-201ENST00000218388 MSH5O43196 834 aa17.11■□□□□ 0.33
TIMP1-201ENST00000218388 ZNF853P0CG23 659 aa17.11■□□□□ 0.33
TIMP1-201ENST00000218388 ATG3Q9NT62 314 aa17.11■□□□□ 0.33
TIMP1-201ENST00000218388 PALLDQ8WX93 1383 aa17.11■□□□□ 0.33
TIMP1-201ENST00000218388 RGPD3A6NKT7 1758 aaPredicted RBP17.1■□□□□ 0.33
TIMP1-201ENST00000218388 RGPD4Q7Z3J3 1758 aa17.1■□□□□ 0.33
TIMP1-201ENST00000218388 APBA3O96018 575 aa17.1■□□□□ 0.33
TIMP1-201ENST00000218388 SLC39A6Q13433 755 aa17.1■□□□□ 0.33
TIMP1-201ENST00000218388 MBIPQ9NS73 344 aa17.1■□□□□ 0.33
TIMP1-201ENST00000218388 MIS18AQ9NYP9 233 aa17.1■□□□□ 0.33
TIMP1-201ENST00000218388 ASAP1Q9ULH1 1129 aa17.1■□□□□ 0.33
TIMP1-201ENST00000218388 PTF1AQ7RTS3 328 aa17.09■□□□□ 0.33
TIMP1-201ENST00000218388 FMNL2Q96PY5 1086 aa17.09■□□□□ 0.33
TIMP1-201ENST00000218388 LY75O60449 1722 aa17.08■□□□□ 0.32
TIMP1-201ENST00000218388 PLSCR1O15162 318 aa17.08■□□□□ 0.32
TIMP1-201ENST00000218388 HMGB2P26583 209 aaKnown RBP17.08■□□□□ 0.32
TIMP1-201ENST00000218388 BAG6P46379 1132 aa17.08■□□□□ 0.32
TIMP1-201ENST00000218388 SLFN5Q08AF3 891 aa17.08■□□□□ 0.32
TIMP1-201ENST00000218388 RBM42Q9BTD8 480 aaKnown RBP17.08■□□□□ 0.32
TIMP1-201ENST00000218388 KCPQ6ZWJ8 1503 aa17.07■□□□□ 0.32
TIMP1-201ENST00000218388 FANCIQ9NVI1 1328 aa17.07■□□□□ 0.32
TIMP1-201ENST00000218388 TSR2Q969E8 191 aaKnown RBP17.07■□□□□ 0.32
TIMP1-201ENST00000218388 ZNF831Q5JPB2 1677 aa17.07■□□□□ 0.32
TIMP1-201ENST00000218388 PTCD1O75127 700 aaKnown RBP17.06■□□□□ 0.32
TIMP1-201ENST00000218388 EIF4A1P60842 406 aaKnown RBP17.06■□□□□ 0.32
TIMP1-201ENST00000218388 VSIG10Q8N0Z9 540 aa17.06■□□□□ 0.32
TIMP1-201ENST00000218388 EP400Q96L91 3159 aa17.06■□□□□ 0.32
TIMP1-201ENST00000218388 HEG1Q9ULI3 1381 aa17.05■□□□□ 0.32
TIMP1-201ENST00000218388 LOC102724428A0A0B4J2F2 783 aa17.05■□□□□ 0.32
TIMP1-201ENST00000218388 KCNQ3O43525 872 aa17.05■□□□□ 0.32
TIMP1-201ENST00000218388 SIK1P57059 783 aa17.05■□□□□ 0.32
TIMP1-201ENST00000218388 CDCA7LQ96GN5 454 aa17.05■□□□□ 0.32
TIMP1-201ENST00000218388 ZNF496Q96IT1 587 aaPredicted RBP17.05■□□□□ 0.32
TIMP1-201ENST00000218388 SPINK5Q9NQ38 1064 aaPredicted RBP17.05■□□□□ 0.32
TIMP1-201ENST00000218388 CICQ96RK0 1608 aaPredicted RBP17.04■□□□□ 0.32
TIMP1-201ENST00000218388 SLC27A3Q5K4L6 730 aa17.04■□□□□ 0.32
TIMP1-201ENST00000218388 UPF1Q92900 1129 aaKnown RBP eCLIP17.04■□□□□ 0.32
TIMP1-201ENST00000218388 TEX13AQ9BXU3 409 aaPredicted RBP17.04■□□□□ 0.32
TIMP1-201ENST00000218388 CCNL1Q9UK58 526 aaPredicted RBP17.04■□□□□ 0.32
TIMP1-201ENST00000218388 SOS1Q07889 1333 aaPredicted RBP17.03■□□□□ 0.32
TIMP1-201ENST00000218388 HOXB7P09629 217 aa17.03■□□□□ 0.32
TIMP1-201ENST00000218388 SNRPA1P09661 255 aaKnown RBP17.03■□□□□ 0.32
TIMP1-201ENST00000218388 ATP6V1AP38606 617 aa17.03■□□□□ 0.32
TIMP1-201ENST00000218388 CHMP4AQ9BY43 222 aa17.03■□□□□ 0.32
TIMP1-201ENST00000218388 LAMB4A4D0S4 1761 aa17.02■□□□□ 0.32
TIMP1-201ENST00000218388 TRMT2AQ8IZ69 625 aaKnown RBP17.02■□□□□ 0.32
TIMP1-201ENST00000218388 GIGYF1O75420 1035 aaPredicted RBP17.01■□□□□ 0.31
TIMP1-201ENST00000218388 TXNRD1Q16881 649 aa17.01■□□□□ 0.31
TIMP1-201ENST00000218388 DUSP27Q5VZP5 1158 aa17.01■□□□□ 0.31
TIMP1-201ENST00000218388 TJP1Q07157 1748 aa17.01■□□□□ 0.31
TIMP1-201ENST00000218388 C5P01031 1676 aa17.01■□□□□ 0.31
TIMP1-201ENST00000218388 STARD3NLO95772 234 aa17■□□□□ 0.31
TIMP1-201ENST00000218388 EN1Q05925 392 aaPredicted RBP17■□□□□ 0.31
TIMP1-201ENST00000218388 EXOSC9Q06265 439 aaKnown RBP17■□□□□ 0.31
TIMP1-201ENST00000218388 TAF1LQ8IZX4 1826 aa16.99■□□□□ 0.31
TIMP1-201ENST00000218388 TWISTNBQ3B726 338 aaPredicted RBP16.99■□□□□ 0.31
TIMP1-201ENST00000218388 CAMKK2Q96RR4 588 aa16.99■□□□□ 0.31
TIMP1-201ENST00000218388 RREB1Q92766 1687 aa16.99■□□□□ 0.31
TIMP1-201ENST00000218388 COL5A3P25940 1745 aaPredicted RBP16.99■□□□□ 0.31
TIMP1-201ENST00000218388 CT47B1P0C2W7 299 aaPredicted RBP16.98■□□□□ 0.31
TIMP1-201ENST00000218388 EZH2Q15910 746 aaKnown RBP16.98■□□□□ 0.31
TIMP1-201ENST00000218388 DEFB132Q7Z7B7 95 aa16.98■□□□□ 0.31
TIMP1-201ENST00000218388 DNAJC10Q8IXB1 793 aa16.98■□□□□ 0.31
TIMP1-201ENST00000218388 C8orf58Q8NAV2 365 aa16.98■□□□□ 0.31
TIMP1-201ENST00000218388 SLC4A9Q96Q91 983 aa16.98■□□□□ 0.31
TIMP1-201ENST00000218388 ELL2O00472 640 aaPredicted RBP16.97■□□□□ 0.31
TIMP1-201ENST00000218388 KRT24Q2M2I5 525 aa16.97■□□□□ 0.31
TIMP1-201ENST00000218388 SOCS7O14512 581 aa16.96■□□□□ 0.31
TIMP1-201ENST00000218388 ITPK1Q13572 414 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms