RNA–Protein interactions for RNA: ENST00000070846.10

PKP2-201, Transcript of plakophilin 2, humanhuman

TSL 1 (best) BASIC

Gene PKP2, Length 4,241 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2-201ENST00000070846 MAP3K19Q56UN5 1328 aa13.63□□□□□ -0.23
PKP2-201ENST00000070846 DZIP1Q86YF9 867 aaKnown RBP13.62□□□□□ -0.23
PKP2-201ENST00000070846 CDC5LQ99459 802 aaKnown RBP13.62□□□□□ -0.23
PKP2-201ENST00000070846 DDX11L8A8MPP1 907 aa13.62□□□□□ -0.23
PKP2-201ENST00000070846 TSR1Q2NL82 804 aaKnown RBP13.62□□□□□ -0.23
PKP2-201ENST00000070846 CWC25Q9NXE8 425 aaPredicted RBP13.62□□□□□ -0.23
PKP2-201ENST00000070846 SETDB2Q96T68 719 aa13.62□□□□□ -0.23
PKP2-201ENST00000070846 EYA1Q99502 592 aa13.62□□□□□ -0.23
PKP2-201ENST00000070846 UBAC1Q9BSL1 405 aa13.62□□□□□ -0.23
PKP2-201ENST00000070846 XAGE3Q8WTP9 111 aa13.61□□□□□ -0.23
PKP2-201ENST00000070846 STK3Q13188 491 aa13.61□□□□□ -0.23
PKP2-201ENST00000070846 ALDH1L2Q3SY69 923 aa13.61□□□□□ -0.23
PKP2-201ENST00000070846 CCDC73Q6ZRK6 1079 aa13.61□□□□□ -0.23
PKP2-201ENST00000070846 CRACR2BQ8N4Y2 399 aaPredicted RBP13.61□□□□□ -0.23
PKP2-201ENST00000070846 MINDY4BA8MYZ0 360 aa13.61□□□□□ -0.23
PKP2-201ENST00000070846 USP5P45974 858 aa13.61□□□□□ -0.23
PKP2-201ENST00000070846 R3HCC1Q9Y3T6 440 aaKnown RBP13.61□□□□□ -0.23
PKP2-201ENST00000070846 TTLL12Q14166 644 aaPredicted RBP13.6□□□□□ -0.23
PKP2-201ENST00000070846 CNKSR2Q8WXI2 1034 aa13.6□□□□□ -0.23
PKP2-201ENST00000070846 PCMTD1Q96MG8 357 aaPredicted RBP13.6□□□□□ -0.23
PKP2-201ENST00000070846 SMARCA5O60264 1052 aaPredicted RBP13.6□□□□□ -0.23
PKP2-201ENST00000070846 AKAP4Q5JQC9 854 aa13.6□□□□□ -0.23
PKP2-201ENST00000070846 NBPF14Q5TI25 921 aa13.6□□□□□ -0.23
PKP2-201ENST00000070846 CHMP5Q9NZZ3 219 aa13.6□□□□□ -0.23
PKP2-201ENST00000070846 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.6□□□□□ -0.23
PKP2-201ENST00000070846 FLT4P35916 1363 aa13.6□□□□□ -0.23
PKP2-201ENST00000070846 POLR3DP05423 398 aaPredicted RBP13.6□□□□□ -0.23
PKP2-201ENST00000070846 TPM3P06753 285 aa13.6□□□□□ -0.23
PKP2-201ENST00000070846 FAM98CQ17RN3 349 aaKnown RBP13.6□□□□□ -0.23
PKP2-201ENST00000070846 SIRT1Q96EB6 747 aa13.6□□□□□ -0.23
PKP2-201ENST00000070846 CYP46A1Q9Y6A2 500 aa13.6□□□□□ -0.23
PKP2-201ENST00000070846 GLRX3O76003 335 aaKnown RBP13.59□□□□□ -0.23
PKP2-201ENST00000070846 NUCB2P80303 420 aa13.59□□□□□ -0.23
PKP2-201ENST00000070846 MTHFSDQ2M296 383 aaKnown RBP13.59□□□□□ -0.23
PKP2-201ENST00000070846 TRIM22Q8IYM9 498 aa13.59□□□□□ -0.23
PKP2-201ENST00000070846 PIBF1Q8WXW3 757 aa13.59□□□□□ -0.23
PKP2-201ENST00000070846 TESK2Q96S53 571 aa13.59□□□□□ -0.23
PKP2-201ENST00000070846 SNRKQ9NRH2 765 aa13.59□□□□□ -0.23
PKP2-201ENST00000070846 CTNNA3Q9UI47 895 aa13.59□□□□□ -0.23
PKP2-201ENST00000070846 NIP7Q9Y221 180 aaKnown RBP eCLIP13.59□□□□□ -0.23
PKP2-201ENST00000070846 YTHDC2Q9H6S0 1430 aaKnown RBP13.59□□□□□ -0.23
PKP2-201ENST00000070846 MPHOSPH10O00566 681 aaKnown RBP13.59□□□□□ -0.23
PKP2-201ENST00000070846 TPM2P07951 284 aa13.59□□□□□ -0.23
PKP2-201ENST00000070846 NLRP3Q96P20 1036 aa13.59□□□□□ -0.23
PKP2-201ENST00000070846 SDF4Q9BRK5 362 aa13.59□□□□□ -0.23
PKP2-201ENST00000070846 CHPF2Q9P2E5 772 aa13.59□□□□□ -0.23
PKP2-201ENST00000070846 HOOK1Q9UJC3 728 aaKnown RBP13.59□□□□□ -0.23
PKP2-201ENST00000070846 RTCBQ9Y3I0 505 aaKnown RBP13.59□□□□□ -0.23
PKP2-201ENST00000070846 NPATQ14207 1427 aa13.59□□□□□ -0.23
PKP2-201ENST00000070846 YEATS2Q9ULM3 1422 aa13.59□□□□□ -0.23
PKP2-201ENST00000070846 SLC5A1P13866 664 aa13.59□□□□□ -0.23
PKP2-201ENST00000070846 BLOC1S2Q6QNY1 142 aa13.59□□□□□ -0.23
PKP2-201ENST00000070846 PRM3Q9NNZ6 103 aa13.58□□□□□ -0.24
PKP2-201ENST00000070846 CCDC69A6NI79 296 aa13.58□□□□□ -0.24
PKP2-201ENST00000070846 IP6K1Q92551 441 aa13.58□□□□□ -0.24
PKP2-201ENST00000070846 PRAG1Q86YV5 1406 aa13.58□□□□□ -0.24
PKP2-201ENST00000070846 TRIM27P14373 513 aa13.58□□□□□ -0.24
PKP2-201ENST00000070846 MAP3K12Q12852 859 aa13.58□□□□□ -0.24
PKP2-201ENST00000070846 NOC3LQ8WTT2 800 aaKnown RBP13.58□□□□□ -0.24
PKP2-201ENST00000070846 MKNK2Q9HBH9 465 aa13.57□□□□□ -0.24
PKP2-201ENST00000070846 ST5P78524 1137 aa13.57□□□□□ -0.24
PKP2-201ENST00000070846 ANKRD20A12PQ8NF67 263 aa13.57□□□□□ -0.24
PKP2-201ENST00000070846 CARD14Q9BXL6 1004 aa13.57□□□□□ -0.24
PKP2-201ENST00000070846 PDCP20941 246 aa13.57□□□□□ -0.24
PKP2-201ENST00000070846 TMEM2Q9UHN6 1383 aa13.57□□□□□ -0.24
PKP2-201ENST00000070846 TPM1P09493 284 aa13.56□□□□□ -0.24
PKP2-201ENST00000070846 HOXC9P31274 260 aa13.56□□□□□ -0.24
PKP2-201ENST00000070846 C20orf194Q5TEA3 1177 aa13.56□□□□□ -0.24
PKP2-201ENST00000070846 SOGA3Q5TF21 947 aa13.56□□□□□ -0.24
PKP2-201ENST00000070846 WDR78Q5VTH9 848 aa13.56□□□□□ -0.24
PKP2-201ENST00000070846 MX1P20591 662 aa13.56□□□□□ -0.24
PKP2-201ENST00000070846 DCAF5Q96JK2 942 aa13.56□□□□□ -0.24
PKP2-201ENST00000070846 DNAJC5Q9H3Z4 198 aa13.56□□□□□ -0.24
PKP2-201ENST00000070846 CEBPZQ03701 1054 aaKnown RBP13.56□□□□□ -0.24
PKP2-201ENST00000070846 NAPBQ9H115 298 aa13.56□□□□□ -0.24
PKP2-201ENST00000070846 USP21Q9UK80 565 aa13.56□□□□□ -0.24
PKP2-201ENST00000070846 ITSN2Q9NZM3 1697 aa13.56□□□□□ -0.24
PKP2-201ENST00000070846 DEKP35659 375 aaKnown RBP13.55□□□□□ -0.24
PKP2-201ENST00000070846 TMEM132AQ24JP5 1023 aa13.55□□□□□ -0.24
PKP2-201ENST00000070846 DZIP3Q86Y13 1208 aaKnown RBP13.55□□□□□ -0.24
PKP2-201ENST00000070846 IQSEC3Q9UPP2 1182 aaPredicted RBP13.55□□□□□ -0.24
PKP2-201ENST00000070846 WDHD1O75717 1129 aaPredicted RBP13.55□□□□□ -0.24
PKP2-201ENST00000070846 POLD1P28340 1107 aa13.55□□□□□ -0.24
PKP2-201ENST00000070846 JAKMIP1Q96N16 626 aaKnown RBP13.55□□□□□ -0.24
PKP2-201ENST00000070846 RAB11FIP3O75154 756 aa13.54□□□□□ -0.24
PKP2-201ENST00000070846 RABEP1Q15276 862 aa13.54□□□□□ -0.24
PKP2-201ENST00000070846 TPTE2Q6XPS3 522 aa13.54□□□□□ -0.24
PKP2-201ENST00000070846 PUS7Q96PZ0 661 aaKnown RBP13.54□□□□□ -0.24
PKP2-201ENST00000070846 PTPRCP08575 1304 aa13.54□□□□□ -0.24
PKP2-201ENST00000070846 GNPATO15228 680 aa13.54□□□□□ -0.24
PKP2-201ENST00000070846 PHACTR3Q96KR7 559 aa13.54□□□□□ -0.24
PKP2-201ENST00000070846 NEO1Q92859 1461 aa13.54□□□□□ -0.24
PKP2-201ENST00000070846 A0A1W2PP64 1363 aa13.54□□□□□ -0.24
PKP2-201ENST00000070846 IMMTQ16891 758 aaKnown RBP13.54□□□□□ -0.24
PKP2-201ENST00000070846 CCDC152Q4G0S7 254 aa13.54□□□□□ -0.24
PKP2-201ENST00000070846 CDK5RAP3Q96JB5 506 aa13.54□□□□□ -0.24
PKP2-201ENST00000070846 PIK3R4Q99570 1358 aa13.54□□□□□ -0.24
PKP2-201ENST00000070846 MCM2P49736 904 aa13.53□□□□□ -0.24
PKP2-201ENST00000070846 ZNF287Q9HBT7 754 aa13.53□□□□□ -0.24
PKP2-201ENST00000070846 IPO7O95373 1038 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms