RNA–Protein interactions for RNA: ENST00000066544.7

CDC27-201, Transcript of cell division cycle 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDC27, Length 5,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-201ENST00000066544 LRRCC1Q9C099 1032 aa10.15□□□□□ -0.78
CDC27-201ENST00000066544 KIAA0232Q92628 1395 aa10.15□□□□□ -0.78
CDC27-201ENST00000066544 OVOS2A0A0J9YW53 1432 aa10.15□□□□□ -0.78
CDC27-201ENST00000066544 OVOS2Q6IE36 1432 aa10.15□□□□□ -0.78
CDC27-201ENST00000066544 GNAT3A8MTJ3 354 aa10.15□□□□□ -0.78
CDC27-201ENST00000066544 CCDC30Q5VVM6 783 aa10.15□□□□□ -0.78
CDC27-201ENST00000066544 FLT4P35916 1363 aa10.15□□□□□ -0.79
CDC27-201ENST00000066544 ERBB4Q15303 1308 aa10.15□□□□□ -0.79
CDC27-201ENST00000066544 KCNA6P17658 529 aa10.15□□□□□ -0.79
CDC27-201ENST00000066544 MX1P20591 662 aa10.15□□□□□ -0.79
CDC27-201ENST00000066544 SURF6O75683 361 aaKnown RBP10.14□□□□□ -0.79
CDC27-201ENST00000066544 XPCQ01831 940 aaPredicted RBP10.14□□□□□ -0.79
CDC27-201ENST00000066544 AGLP35573 1532 aa10.14□□□□□ -0.79
CDC27-201ENST00000066544 ESPNB1AK53 854 aa10.14□□□□□ -0.79
CDC27-201ENST00000066544 NASPP49321 788 aaPredicted RBP10.14□□□□□ -0.79
CDC27-201ENST00000066544 NUCB2P80303 420 aa10.14□□□□□ -0.79
CDC27-201ENST00000066544 UBTFL1P0CB47 393 aaPredicted RBP10.14□□□□□ -0.79
CDC27-201ENST00000066544 PTPRUQ92729 1446 aa10.13□□□□□ -0.79
CDC27-201ENST00000066544 GNAI3P08754 354 aa10.13□□□□□ -0.79
CDC27-201ENST00000066544 SETD1AO15047 1707 aaKnown RBP10.13□□□□□ -0.79
CDC27-201ENST00000066544 SETD1BQ9UPS6 1966 aaKnown RBP10.13□□□□□ -0.79
CDC27-201ENST00000066544 HOXC9P31274 260 aa10.13□□□□□ -0.79
CDC27-201ENST00000066544 TECPR2O15040 1411 aa10.13□□□□□ -0.79
CDC27-201ENST00000066544 KIF24Q5T7B8 1368 aa10.13□□□□□ -0.79
CDC27-201ENST00000066544 KCNQ3O43525 872 aa10.13□□□□□ -0.79
CDC27-201ENST00000066544 GDPD2Q9HCC8 539 aa10.13□□□□□ -0.79
CDC27-201ENST00000066544 RIMS1Q86UR5 1692 aaKnown RBP10.13□□□□□ -0.79
CDC27-201ENST00000066544 TMX3Q96JJ7 454 aa10.12□□□□□ -0.79
CDC27-201ENST00000066544 ANP32BQ92688 251 aaKnown RBP10.12□□□□□ -0.79
CDC27-201ENST00000066544 ESYT1Q9BSJ8 1104 aa10.12□□□□□ -0.79
CDC27-201ENST00000066544 LGR6Q9HBX8 967 aa10.12□□□□□ -0.79
CDC27-201ENST00000066544 SBNO1A3KN83 1393 aa10.12□□□□□ -0.79
CDC27-201ENST00000066544 KLHL40Q2TBA0 621 aa10.12□□□□□ -0.79
CDC27-201ENST00000066544 RNF214Q8ND24 703 aa10.12□□□□□ -0.79
CDC27-201ENST00000066544 USP44Q9H0E7 712 aa10.12□□□□□ -0.79
CDC27-201ENST00000066544 ZDHHC9Q9Y397 364 aa10.12□□□□□ -0.79
CDC27-201ENST00000066544 OS9Q13438 667 aaPredicted RBP10.12□□□□□ -0.79
CDC27-201ENST00000066544 IGSF1Q8N6C5 1336 aa10.12□□□□□ -0.79
CDC27-201ENST00000066544 TAF7Q15545 349 aaPredicted RBP10.11□□□□□ -0.79
CDC27-201ENST00000066544 PPP1R42Q7Z4L9 355 aa10.11□□□□□ -0.79
CDC27-201ENST00000066544 IL25Q9H293 177 aa10.11□□□□□ -0.79
CDC27-201ENST00000066544 ATP8B2P98198 1209 aa10.11□□□□□ -0.79
CDC27-201ENST00000066544 DDX54Q8TDD1 881 aaKnown RBP10.11□□□□□ -0.79
CDC27-201ENST00000066544 LRRC59Q96AG4 307 aaKnown RBP10.11□□□□□ -0.79
CDC27-201ENST00000066544 LMBRD1Q9NUN5 540 aa10.11□□□□□ -0.79
CDC27-201ENST00000066544 NSFL1CQ9UNZ2 370 aaKnown RBP10.11□□□□□ -0.79
CDC27-201ENST00000066544 CEP170BQ9Y4F5 1589 aaPredicted RBP10.11□□□□□ -0.79
CDC27-201ENST00000066544 SRGAP3O43295 1099 aa10.11□□□□□ -0.79
CDC27-201ENST00000066544 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.11□□□□□ -0.79
CDC27-201ENST00000066544 TTC21AQ8NDW8 1320 aa10.11□□□□□ -0.79
CDC27-201ENST00000066544 CHMLP26374 656 aa10.11□□□□□ -0.79
CDC27-201ENST00000066544 NBPF7P0C2Y1 421 aaPredicted RBP10.1□□□□□ -0.79
CDC27-201ENST00000066544 MPRIPQ6WCQ1 1025 aa10.1□□□□□ -0.79
CDC27-201ENST00000066544 ARHGEF10O15013 1369 aa10.1□□□□□ -0.79
CDC27-201ENST00000066544 C3P01024 1663 aa10.1□□□□□ -0.79
CDC27-201ENST00000066544 ITSN1Q15811 1721 aa10.1□□□□□ -0.79
CDC27-201ENST00000066544 MCCP23508 829 aa10.1□□□□□ -0.79
CDC27-201ENST00000066544 USP31Q70CQ4 1352 aa10.1□□□□□ -0.79
CDC27-201ENST00000066544 ZSCAN23Q3MJ62 389 aa10.1□□□□□ -0.79
CDC27-201ENST00000066544 PI4KAP2A4QPH2 592 aa10.1□□□□□ -0.79
CDC27-201ENST00000066544 CLCN1P35523 988 aa10.1□□□□□ -0.79
CDC27-201ENST00000066544 MPNDQ8N594 471 aa10.1□□□□□ -0.79
CDC27-201ENST00000066544 PI4KAP1Q8N8J0 262 aa10.1□□□□□ -0.79
CDC27-201ENST00000066544 CHPF2Q9P2E5 772 aa10.1□□□□□ -0.79
CDC27-201ENST00000066544 MON2Q7Z3U7 1717 aa10.1□□□□□ -0.79
CDC27-201ENST00000066544 PEAK1Q9H792 1746 aa10.1□□□□□ -0.79
CDC27-201ENST00000066544 SYCE3A1L190 88 aa10.09□□□□□ -0.79
CDC27-201ENST00000066544 PRIM1P49642 420 aaKnown RBP10.09□□□□□ -0.79
CDC27-201ENST00000066544 SRCIN1Q9C0H9 1055 aa10.09□□□□□ -0.79
CDC27-201ENST00000066544 PLEKHG1Q9ULL1 1385 aa10.09□□□□□ -0.79
CDC27-201ENST00000066544 PTMSP20962 102 aa10.09□□□□□ -0.79
CDC27-201ENST00000066544 GPT2Q8TD30 523 aa10.09□□□□□ -0.79
CDC27-201ENST00000066544 CPA1P15085 419 aa10.09□□□□□ -0.79
CDC27-201ENST00000066544 TEFQ10587 303 aa10.09□□□□□ -0.79
CDC27-201ENST00000066544 NBPF6Q5VWK0 638 aa10.09□□□□□ -0.79
CDC27-201ENST00000066544 NBPF4Q96M43 638 aa10.09□□□□□ -0.79
CDC27-201ENST00000066544 RBSNQ9H1K0 784 aa10.09□□□□□ -0.79
CDC27-201ENST00000066544 TBX22Q9Y458 520 aa10.09□□□□□ -0.79
CDC27-201ENST00000066544 SPG7Q9UQ90 795 aa10.08□□□□□ -0.8
CDC27-201ENST00000066544 ESCO1Q5FWF5 840 aa10.08□□□□□ -0.8
CDC27-201ENST00000066544 CWC22Q9HCG8 908 aaKnown RBP10.08□□□□□ -0.8
CDC27-201ENST00000066544 CYP2E1P05181 493 aaPredicted RBP10.08□□□□□ -0.8
CDC27-201ENST00000066544 OSBPL3Q9H4L5 887 aa10.08□□□□□ -0.8
CDC27-201ENST00000066544 ZNF530Q6P9A1 599 aaPredicted RBP10.08□□□□□ -0.8
CDC27-201ENST00000066544 CWC27Q6UX04 472 aaKnown RBP10.08□□□□□ -0.8
CDC27-201ENST00000066544 THEMISQ8N1K5 641 aaPredicted RBP10.08□□□□□ -0.8
CDC27-201ENST00000066544 TMEM63CQ9P1W3 806 aa10.08□□□□□ -0.8
CDC27-201ENST00000066544 ISY1Q9ULR0 285 aaKnown RBP10.08□□□□□ -0.8
CDC27-201ENST00000066544 PSME1Q06323 249 aa10.08□□□□□ -0.8
CDC27-201ENST00000066544 AIMP1Q12904 312 aaKnown RBP10.08□□□□□ -0.8
CDC27-201ENST00000066544 MAP3K5Q99683 1374 aa10.08□□□□□ -0.8
CDC27-201ENST00000066544 RHPN1Q8TCX5 695 aa10.07□□□□□ -0.8
CDC27-201ENST00000066544 KDRP35968 1356 aa10.07□□□□□ -0.8
CDC27-201ENST00000066544 PHF8Q9UPP1 1060 aa10.07□□□□□ -0.8
CDC27-201ENST00000066544 PA2G4Q9UQ80 394 aaKnown RBP10.07□□□□□ -0.8
CDC27-201ENST00000066544 IBTKQ9P2D0 1353 aaPredicted RBP10.07□□□□□ -0.8
CDC27-201ENST00000066544 SOS1Q07889 1333 aaPredicted RBP10.06□□□□□ -0.8
CDC27-201ENST00000066544 PRAMEF22A3QJZ6 481 aa10.06□□□□□ -0.8
CDC27-201ENST00000066544 AKAP12Q02952 1782 aa10.06□□□□□ -0.8
CDC27-201ENST00000066544 SSH2Q76I76 1423 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms