RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 SPINK5Q9NQ38 1064 aaPredicted RBP12.34□□□□□ -0.43
NIPAL3-201ENST00000003912 GCP02774 474 aa12.34□□□□□ -0.43
NIPAL3-201ENST00000003912 DEKP35659 375 aaKnown RBP12.34□□□□□ -0.43
NIPAL3-201ENST00000003912 ST5P78524 1137 aa12.34□□□□□ -0.43
NIPAL3-201ENST00000003912 DDX46Q7L014 1031 aaKnown RBP12.34□□□□□ -0.43
NIPAL3-201ENST00000003912 SLF2Q8IX21 1173 aa12.34□□□□□ -0.43
NIPAL3-201ENST00000003912 EXOC6BQ9Y2D4 811 aa12.34□□□□□ -0.43
NIPAL3-201ENST00000003912 PIK3R4Q99570 1358 aa12.33□□□□□ -0.43
NIPAL3-201ENST00000003912 DNMT1P26358 1616 aaKnown RBP12.33□□□□□ -0.44
NIPAL3-201ENST00000003912 TARBP1Q13395 1621 aaKnown RBP12.33□□□□□ -0.44
NIPAL3-201ENST00000003912 GLRX3O76003 335 aaKnown RBP12.33□□□□□ -0.44
NIPAL3-201ENST00000003912 KRT32Q14532 448 aa12.33□□□□□ -0.44
NIPAL3-201ENST00000003912 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.33□□□□□ -0.44
NIPAL3-201ENST00000003912 IPO7O95373 1038 aaKnown RBP12.33□□□□□ -0.44
NIPAL3-201ENST00000003912 SOGA3Q5TF21 947 aa12.33□□□□□ -0.44
NIPAL3-201ENST00000003912 STK11IPQ8N1F8 1099 aa12.33□□□□□ -0.44
NIPAL3-201ENST00000003912 ATP6V1AP38606 617 aa12.33□□□□□ -0.44
NIPAL3-201ENST00000003912 SASS6Q6UVJ0 657 aa12.33□□□□□ -0.44
NIPAL3-201ENST00000003912 MAP3K2Q9Y2U5 619 aa12.33□□□□□ -0.44
NIPAL3-201ENST00000003912 ASXL1Q8IXJ9 1541 aa12.33□□□□□ -0.44
NIPAL3-201ENST00000003912 KDM4AO75164 1064 aa12.33□□□□□ -0.44
NIPAL3-201ENST00000003912 ACSBG1Q96GR2 724 aa12.33□□□□□ -0.44
NIPAL3-201ENST00000003912 MAST1Q9Y2H9 1570 aa12.33□□□□□ -0.44
NIPAL3-201ENST00000003912 TXLNAP40222 546 aa12.32□□□□□ -0.44
NIPAL3-201ENST00000003912 DZIP1Q86YF9 867 aaKnown RBP12.32□□□□□ -0.44
NIPAL3-201ENST00000003912 CDK5RAP3Q96JB5 506 aa12.32□□□□□ -0.44
NIPAL3-201ENST00000003912 F6X3S4 739 aa12.32□□□□□ -0.44
NIPAL3-201ENST00000003912 MAP3K12Q12852 859 aa12.32□□□□□ -0.44
NIPAL3-201ENST00000003912 NUTM1Q86Y26 1132 aa12.32□□□□□ -0.44
NIPAL3-201ENST00000003912 CDCA7Q9BWT1 371 aaPredicted RBP12.32□□□□□ -0.44
NIPAL3-201ENST00000003912 USP5P45974 858 aa12.31□□□□□ -0.44
NIPAL3-201ENST00000003912 NUP133Q8WUM0 1156 aa12.31□□□□□ -0.44
NIPAL3-201ENST00000003912 MBIPQ9NS73 344 aa12.31□□□□□ -0.44
NIPAL3-201ENST00000003912 C6orf229H3BNL8 230 aa12.31□□□□□ -0.44
NIPAL3-201ENST00000003912 IMMTQ16891 758 aaKnown RBP12.31□□□□□ -0.44
NIPAL3-201ENST00000003912 NBPF6Q5VWK0 638 aa12.31□□□□□ -0.44
NIPAL3-201ENST00000003912 CWC27Q6UX04 472 aaKnown RBP12.31□□□□□ -0.44
NIPAL3-201ENST00000003912 NBPF5PQ86XG9 351 aaPredicted RBP12.31□□□□□ -0.44
NIPAL3-201ENST00000003912 NBPF4Q96M43 638 aa12.31□□□□□ -0.44
NIPAL3-201ENST00000003912 CDKL5O76039 1030 aa12.31□□□□□ -0.44
NIPAL3-201ENST00000003912 ATP2B1P20020 1258 aa12.31□□□□□ -0.44
NIPAL3-201ENST00000003912 PDE4CQ08493 712 aa12.31□□□□□ -0.44
NIPAL3-201ENST00000003912 EIF4A2Q14240 407 aaKnown RBP12.31□□□□□ -0.44
NIPAL3-201ENST00000003912 BLOC1S2Q6QNY1 142 aa12.31□□□□□ -0.44
NIPAL3-201ENST00000003912 ZNF396Q96N95 335 aaPredicted RBP12.31□□□□□ -0.44
NIPAL3-201ENST00000003912 WDHD1O75717 1129 aaPredicted RBP12.31□□□□□ -0.44
NIPAL3-201ENST00000003912 FBLN1P23142 703 aa12.31□□□□□ -0.44
NIPAL3-201ENST00000003912 ADGRL2O95490 1459 aa12.31□□□□□ -0.44
NIPAL3-201ENST00000003912 FAM83GA6ND36 823 aa12.31□□□□□ -0.44
NIPAL3-201ENST00000003912 MX1P20591 662 aa12.31□□□□□ -0.44
NIPAL3-201ENST00000003912 ANKRD13DQ6ZTN6 518 aa12.3□□□□□ -0.44
NIPAL3-201ENST00000003912 CRACR2BQ8N4Y2 399 aaPredicted RBP12.3□□□□□ -0.44
NIPAL3-201ENST00000003912 LRRFIP2Q9Y608 721 aaKnown RBP12.3□□□□□ -0.44
NIPAL3-201ENST00000003912 SAMD9Q5K651 1589 aa12.3□□□□□ -0.44
NIPAL3-201ENST00000003912 POLR3DP05423 398 aaPredicted RBP12.3□□□□□ -0.44
NIPAL3-201ENST00000003912 CNKSR2Q8WXI2 1034 aa12.3□□□□□ -0.44
NIPAL3-201ENST00000003912 ZNF622Q969S3 477 aaKnown RBP eCLIP12.29□□□□□ -0.44
NIPAL3-201ENST00000003912 SDF4Q9BRK5 362 aa12.29□□□□□ -0.44
NIPAL3-201ENST00000003912 RTN4Q9NQC3 1192 aaKnown RBP12.29□□□□□ -0.44
NIPAL3-201ENST00000003912 ARHGEF12Q9NZN5 1544 aa12.29□□□□□ -0.44
NIPAL3-201ENST00000003912 NBPF14Q5TI25 921 aa12.29□□□□□ -0.44
NIPAL3-201ENST00000003912 OLFM4Q6UX06 510 aa12.29□□□□□ -0.44
NIPAL3-201ENST00000003912 JMYQ8N9B5 988 aa12.29□□□□□ -0.44
NIPAL3-201ENST00000003912 SETDB2Q96T68 719 aa12.29□□□□□ -0.44
NIPAL3-201ENST00000003912 ZNF219Q9P2Y4 722 aaPredicted RBP12.29□□□□□ -0.44
NIPAL3-201ENST00000003912 POLKQ9UBT6 870 aa12.29□□□□□ -0.44
NIPAL3-201ENST00000003912 MAPKBP1O60336 1514 aa12.29□□□□□ -0.44
NIPAL3-201ENST00000003912 WWC2Q6AWC2 1192 aa12.29□□□□□ -0.44
NIPAL3-201ENST00000003912 LDHAL6AQ6ZMR3 332 aa12.29□□□□□ -0.44
NIPAL3-201ENST00000003912 PRM3Q9NNZ6 103 aa12.29□□□□□ -0.44
NIPAL3-201ENST00000003912 TMEM2Q9UHN6 1383 aa12.29□□□□□ -0.44
NIPAL3-201ENST00000003912 CCDC152Q4G0S7 254 aa12.29□□□□□ -0.44
NIPAL3-201ENST00000003912 IP6K1Q92551 441 aa12.29□□□□□ -0.44
NIPAL3-201ENST00000003912 BTG4Q9NY30 223 aa12.29□□□□□ -0.44
NIPAL3-201ENST00000003912 PI4KAP2A4QPH2 592 aa12.28□□□□□ -0.44
NIPAL3-201ENST00000003912 ATP5J2-PTCD1G3V325 749 aa12.28□□□□□ -0.44
NIPAL3-201ENST00000003912 PI4KAP1Q8N8J0 262 aa12.28□□□□□ -0.44
NIPAL3-201ENST00000003912 PCDH11XQ9BZA7 1347 aa12.28□□□□□ -0.44
NIPAL3-201ENST00000003912 PCDH11YQ9BZA8 1340 aa12.28□□□□□ -0.44
NIPAL3-201ENST00000003912 TMEM132AQ24JP5 1023 aa12.28□□□□□ -0.44
NIPAL3-201ENST00000003912 AEBP1Q8IUX7 1158 aa12.28□□□□□ -0.44
NIPAL3-201ENST00000003912 ZFYVE9O95405 1425 aa12.28□□□□□ -0.44
NIPAL3-201ENST00000003912 DCAF5Q96JK2 942 aa12.28□□□□□ -0.44
NIPAL3-201ENST00000003912 MPHOSPH10O00566 681 aaKnown RBP12.28□□□□□ -0.44
NIPAL3-201ENST00000003912 UBE3BQ7Z3V4 1068 aa12.28□□□□□ -0.44
NIPAL3-201ENST00000003912 NAT10Q9H0A0 1025 aaKnown RBP12.28□□□□□ -0.44
NIPAL3-201ENST00000003912 ZRANB1Q9UGI0 708 aa12.28□□□□□ -0.44
NIPAL3-201ENST00000003912 U3KPZ7 1027 aaPredicted RBP12.28□□□□□ -0.44
NIPAL3-201ENST00000003912 LDHCP07864 332 aa12.27□□□□□ -0.44
NIPAL3-201ENST00000003912 STK38Q15208 465 aa12.27□□□□□ -0.44
NIPAL3-201ENST00000003912 ZSCAN31Q96LW9 406 aaPredicted RBP12.27□□□□□ -0.45
NIPAL3-201ENST00000003912 BOLA2Q9H3K6 86 aa12.27□□□□□ -0.45
NIPAL3-201ENST00000003912 MKNK2Q9HBH9 465 aa12.27□□□□□ -0.45
NIPAL3-201ENST00000003912 NOL7Q9UMY1 257 aaKnown RBP12.27□□□□□ -0.45
NIPAL3-201ENST00000003912 KRT18P05783 430 aaKnown RBP12.27□□□□□ -0.45
NIPAL3-201ENST00000003912 HOXC9P31274 260 aa12.27□□□□□ -0.45
NIPAL3-201ENST00000003912 EPS15P42566 896 aa12.27□□□□□ -0.45
NIPAL3-201ENST00000003912 STK3Q13188 491 aa12.27□□□□□ -0.45
NIPAL3-201ENST00000003912 PDRG1Q9NUG6 133 aa12.27□□□□□ -0.45
NIPAL3-201ENST00000003912 WASF1Q92558 559 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms