RNA–Protein interactions for RNA: ENSMUST00000062439.4

Ccdc54-201, Transcript of Coiled-coil domain-containing protein 54, mousemouse

APPRIS P1 BASIC

Gene Ccdc54, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc54-201ENSMUST00000062439 Asxl2Q8BZ32 1370 aa11.68□□□□□ -0.54
Ccdc54-201ENSMUST00000062439 Serpinb6eI7HJI3 429 aa11.68□□□□□ -0.54
Ccdc54-201ENSMUST00000062439 BcanQ61361 883 aa11.68□□□□□ -0.54
Ccdc54-201ENSMUST00000062439 Fbxl21Q8BFZ4 434 aa11.68□□□□□ -0.54
Ccdc54-201ENSMUST00000062439 Sap130Q8BIH0 1057 aa11.68□□□□□ -0.54
Ccdc54-201ENSMUST00000062439 Psapl1Q8C1C1 522 aa11.68□□□□□ -0.54
Ccdc54-201ENSMUST00000062439 Pabpn1Q8CCS6 302 aaKnown RBP11.68□□□□□ -0.54
Ccdc54-201ENSMUST00000062439 Dpysl4O35098 572 aa11.67□□□□□ -0.54
Ccdc54-201ENSMUST00000062439 FosbP13346 338 aa11.67□□□□□ -0.54
Ccdc54-201ENSMUST00000062439 CblbQ3TTA7 982 aa11.67□□□□□ -0.54
Ccdc54-201ENSMUST00000062439 Tmem40Q4FJU9 225 aa11.67□□□□□ -0.54
Ccdc54-201ENSMUST00000062439 TbceQ8CIV8 524 aa11.67□□□□□ -0.54
Ccdc54-201ENSMUST00000062439 WaslQ91YD9 501 aa11.67□□□□□ -0.54
Ccdc54-201ENSMUST00000062439 CsadQ9DBE0 493 aa11.67□□□□□ -0.54
Ccdc54-201ENSMUST00000062439 A0A0U1RNP2 1173 aa11.66□□□□□ -0.54
Ccdc54-201ENSMUST00000062439 CfbP04186 761 aa11.66□□□□□ -0.54
Ccdc54-201ENSMUST00000062439 Bmp1P98063 991 aa11.66□□□□□ -0.54
Ccdc54-201ENSMUST00000062439 Nupr2Q497P3 102 aa11.66□□□□□ -0.54
Ccdc54-201ENSMUST00000062439 Tbccd1Q640P7 552 aa11.66□□□□□ -0.54
Ccdc54-201ENSMUST00000062439 Cyp4x1Q6A152 507 aa11.66□□□□□ -0.54
Ccdc54-201ENSMUST00000062439 BphlQ8R164 291 aa11.66□□□□□ -0.54
Ccdc54-201ENSMUST00000062439 Pcdhb13Q91Y06 796 aa11.66□□□□□ -0.54
Ccdc54-201ENSMUST00000062439 Orc1Q9Z1N2 840 aaKnown RBP11.66□□□□□ -0.54
Ccdc54-201ENSMUST00000062439 Irgm2A0A140LIF8 407 aa11.65□□□□□ -0.54
Ccdc54-201ENSMUST00000062439 Arhgap6O54834 987 aa11.65□□□□□ -0.54
Ccdc54-201ENSMUST00000062439 Pou2f3P31362 431 aa11.65□□□□□ -0.54
Ccdc54-201ENSMUST00000062439 Phactr1Q2M3X8 580 aa11.65□□□□□ -0.54
Ccdc54-201ENSMUST00000062439 RubcnlQ3TD16 648 aa11.65□□□□□ -0.54
Ccdc54-201ENSMUST00000062439 Gm4788E9Q8B5 879 aa11.64□□□□□ -0.55
Ccdc54-201ENSMUST00000062439 Klhl33G3UW92 533 aa11.64□□□□□ -0.55
Ccdc54-201ENSMUST00000062439 Wnk4Q80UE6 1222 aa11.64□□□□□ -0.55
Ccdc54-201ENSMUST00000062439 Prmt3Q922H1 532 aa11.64□□□□□ -0.55
Ccdc54-201ENSMUST00000062439 Fam155bA2BDP1 471 aa11.63□□□□□ -0.55
Ccdc54-201ENSMUST00000062439 Msl3l2G3X992 371 aa11.63□□□□□ -0.55
Ccdc54-201ENSMUST00000062439 FurinP23188 793 aa11.63□□□□□ -0.55
Ccdc54-201ENSMUST00000062439 Gna15P30678 374 aa11.63□□□□□ -0.55
Ccdc54-201ENSMUST00000062439 Psen2Q61144 448 aa11.63□□□□□ -0.55
Ccdc54-201ENSMUST00000062439 Pou4f2Q63934 411 aa11.63□□□□□ -0.55
Ccdc54-201ENSMUST00000062439 Zcwpw1Q6IR42 630 aa11.63□□□□□ -0.55
Ccdc54-201ENSMUST00000062439 Npas4Q8BGD7 802 aa11.63□□□□□ -0.55
Ccdc54-201ENSMUST00000062439 Robo4Q8C310 1012 aa11.63□□□□□ -0.55
Ccdc54-201ENSMUST00000062439 Kat6aQ8BZ21 2003 aa11.63□□□□□ -0.55
Ccdc54-201ENSMUST00000062439 Dusp27Q148W8 1138 aa11.62□□□□□ -0.55
Ccdc54-201ENSMUST00000062439 Rhbdd1Q8BHC7 315 aa11.62□□□□□ -0.55
Ccdc54-201ENSMUST00000062439 Rsad2Q8CBB9 362 aa11.62□□□□□ -0.55
Ccdc54-201ENSMUST00000062439 Amhr2Q8K592 568 aa11.62□□□□□ -0.55
Ccdc54-201ENSMUST00000062439 Hps5P59438 1126 aa11.61□□□□□ -0.55
Ccdc54-201ENSMUST00000062439 Nxpe4Q52KP5 543 aa11.61□□□□□ -0.55
Ccdc54-201ENSMUST00000062439 Agbl2Q8CDK2 862 aa11.61□□□□□ -0.55
Ccdc54-201ENSMUST00000062439 Pds5bQ4VA53 1446 aaKnown RBP11.6□□□□□ -0.55
Ccdc54-201ENSMUST00000062439 P01644 108 aa11.6□□□□□ -0.55
Ccdc54-201ENSMUST00000062439 Gse1Q3U3C9 1213 aa11.6□□□□□ -0.55
Ccdc54-201ENSMUST00000062439 UstQ8BUB6 407 aa11.6□□□□□ -0.55
Ccdc54-201ENSMUST00000062439 Upk3bl1Q9D701 249 aa11.6□□□□□ -0.55
Ccdc54-201ENSMUST00000062439 Tcea2Q9QVN7 299 aa11.6□□□□□ -0.55
Ccdc54-201ENSMUST00000062439 Prss30Q9QYZ9 310 aa11.6□□□□□ -0.55
Ccdc54-201ENSMUST00000062439 Gm6133B2RY53 190 aa11.59□□□□□ -0.55
Ccdc54-201ENSMUST00000062439 Slc39a2G3X943 309 aa11.59□□□□□ -0.55
Ccdc54-201ENSMUST00000062439 Eif1aQ60872 144 aaKnown RBP11.59□□□□□ -0.55
Ccdc54-201ENSMUST00000062439 Eif1axQ8BMJ3 144 aaKnown RBP11.59□□□□□ -0.55
Ccdc54-201ENSMUST00000062439 Rnf219Q8K2Y0 722 aa11.59□□□□□ -0.55
Ccdc54-201ENSMUST00000062439 Alx3O70137 343 aa11.58□□□□□ -0.56
Ccdc54-201ENSMUST00000062439 Clec11aO88200 328 aa11.58□□□□□ -0.56
Ccdc54-201ENSMUST00000062439 Mapk1P63085 358 aa11.58□□□□□ -0.56
Ccdc54-201ENSMUST00000062439 RhoqQ8R527 205 aa11.58□□□□□ -0.56
Ccdc54-201ENSMUST00000062439 Cela3bQ9CQ52 269 aa11.58□□□□□ -0.56
Ccdc54-201ENSMUST00000062439 RfxankQ9Z205 269 aa11.58□□□□□ -0.56
Ccdc54-201ENSMUST00000062439 Thoc2B1AZI6 1594 aaKnown RBP11.58□□□□□ -0.56
Ccdc54-201ENSMUST00000062439 Lonrf2B2RT44 518 aa11.57□□□□□ -0.56
Ccdc54-201ENSMUST00000062439 Gm44503E9PYU5 387 aa11.57□□□□□ -0.56
Ccdc54-201ENSMUST00000062439 Dnaaf4Q8R368 420 aa11.57□□□□□ -0.56
Ccdc54-201ENSMUST00000062439 Zcchc6Q5BLK4 1491 aaKnown RBP11.57□□□□□ -0.56
Ccdc54-201ENSMUST00000062439 Dcaf10A2AKB9 566 aa11.56□□□□□ -0.56
Ccdc54-201ENSMUST00000062439 Wscd2D4PHA7 571 aa11.56□□□□□ -0.56
Ccdc54-201ENSMUST00000062439 Cracr2aQ3UP38 310 aa11.56□□□□□ -0.56
Ccdc54-201ENSMUST00000062439 Tbc1d9Q3UYK3 1264 aa11.56□□□□□ -0.56
Ccdc54-201ENSMUST00000062439 Nxf1Q99JX7 618 aaKnown RBP11.56□□□□□ -0.56
Ccdc54-201ENSMUST00000062439 Slc9a9Q8BZ00 644 aa11.55□□□□□ -0.56
Ccdc54-201ENSMUST00000062439 Ssuh2Q8C3L1 340 aa11.55□□□□□ -0.56
Ccdc54-201ENSMUST00000062439 P01645 108 aa11.54□□□□□ -0.56
Ccdc54-201ENSMUST00000062439 Ppp1r12cQ3UMT1 782 aa11.54□□□□□ -0.56
Ccdc54-201ENSMUST00000062439 Pdcd2lQ8C5N5 364 aa11.54□□□□□ -0.56
Ccdc54-201ENSMUST00000062439 Naa15Q80UM3 865 aaKnown RBP11.53□□□□□ -0.56
Ccdc54-201ENSMUST00000062439 Nop9Q8BMC4 636 aaKnown RBP11.53□□□□□ -0.56
Ccdc54-201ENSMUST00000062439 Mettl5Q8K1A0 209 aa11.53□□□□□ -0.56
Ccdc54-201ENSMUST00000062439 Lzts3A2AHG0 700 aa11.52□□□□□ -0.57
Ccdc54-201ENSMUST00000062439 NmiO35309 314 aa11.52□□□□□ -0.57
Ccdc54-201ENSMUST00000062439 HmgcrQ01237 887 aa11.52□□□□□ -0.57
Ccdc54-201ENSMUST00000062439 Fbxo3Q9DC63 480 aa11.52□□□□□ -0.57
Ccdc54-201ENSMUST00000062439 Znf76Q8BMU0 568 aa11.51□□□□□ -0.57
Ccdc54-201ENSMUST00000062439 Calhm4Q8CE93 315 aa11.51□□□□□ -0.57
Ccdc54-201ENSMUST00000062439 Dnajc22Q8CHS2 339 aa11.51□□□□□ -0.57
Ccdc54-201ENSMUST00000062439 Cmtr1Q9DBC3 837 aa11.51□□□□□ -0.57
Ccdc54-201ENSMUST00000062439 CorinQ9Z319 1113 aa11.51□□□□□ -0.57
Ccdc54-201ENSMUST00000062439 Atad2bE9Q166 1460 aaKnown RBP11.51□□□□□ -0.57
Ccdc54-201ENSMUST00000062439 Gm11563B1AQ90 168 aa11.5□□□□□ -0.57
Ccdc54-201ENSMUST00000062439 Cyp17a1P27786 507 aa11.5□□□□□ -0.57
Ccdc54-201ENSMUST00000062439 Ptpn5P54830 541 aa11.5□□□□□ -0.57
Ccdc54-201ENSMUST00000062439 Krtap4-7Q9D732 168 aa11.5□□□□□ -0.57
Ccdc54-201ENSMUST00000062439 Map7d1A2AJI0 846 aa11.49□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 36.6 ms