Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim33Q99PP7 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim33Q99PP7 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim33Q99PP7 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
Trim33Q99PP7 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim33Q99PP7 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim33Q99PP7 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim33Q99PP7 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim33Q99PP7 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim33Q99PP7 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trim33Q99PP7 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Trim33Q99PP7 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.8■□□□□ 0.12
Trim33Q99PP7 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim33Q99PP7 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Trim33Q99PP7 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim33Q99PP7 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim33Q99PP7 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim33Q99PP7 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trim33Q99PP7 Gm32996-201ENSMUST00000199828 1447 ntBASIC15.8■□□□□ 0.12
Trim33Q99PP7 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Trim33Q99PP7 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim33Q99PP7 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim33Q99PP7 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trim33Q99PP7 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.8■□□□□ 0.12
Trim33Q99PP7 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trim33Q99PP7 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Trim33Q99PP7 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trim33Q99PP7 Otx2os1-206ENSMUST00000228153 787 ntBASIC15.8■□□□□ 0.12
Trim33Q99PP7 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Trim33Q99PP7 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim33Q99PP7 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Trim33Q99PP7 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.8■□□□□ 0.12
Trim33Q99PP7 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim33Q99PP7 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trim33Q99PP7 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim33Q99PP7 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim33Q99PP7 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim33Q99PP7 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim33Q99PP7 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim33Q99PP7 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim33Q99PP7 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim33Q99PP7 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim33Q99PP7 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim33Q99PP7 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim33Q99PP7 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim33Q99PP7 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.79■□□□□ 0.12
Trim33Q99PP7 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim33Q99PP7 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim33Q99PP7 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Trim33Q99PP7 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim33Q99PP7 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trim33Q99PP7 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim33Q99PP7 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim33Q99PP7 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trim33Q99PP7 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.79■□□□□ 0.12
Trim33Q99PP7 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim33Q99PP7 Gm21362-201ENSMUST00000194272 928 ntBASIC15.79■□□□□ 0.12
Trim33Q99PP7 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Trim33Q99PP7 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim33Q99PP7 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
Trim33Q99PP7 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trim33Q99PP7 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim33Q99PP7 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim33Q99PP7 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
Trim33Q99PP7 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Trim33Q99PP7 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trim33Q99PP7 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim33Q99PP7 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim33Q99PP7 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trim33Q99PP7 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim33Q99PP7 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim33Q99PP7 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim33Q99PP7 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trim33Q99PP7 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim33Q99PP7 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trim33Q99PP7 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.78■□□□□ 0.12
Trim33Q99PP7 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC15.78■□□□□ 0.12
Trim33Q99PP7 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
Trim33Q99PP7 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trim33Q99PP7 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trim33Q99PP7 CT009713.7-201ENSMUST00000224689 571 ntBASIC15.78■□□□□ 0.12
Trim33Q99PP7 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim33Q99PP7 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim33Q99PP7 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim33Q99PP7 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim33Q99PP7 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim33Q99PP7 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trim33Q99PP7 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trim33Q99PP7 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim33Q99PP7 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim33Q99PP7 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Trim33Q99PP7 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim33Q99PP7 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trim33Q99PP7 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim33Q99PP7 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trim33Q99PP7 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim33Q99PP7 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.77■□□□□ 0.12
Trim33Q99PP7 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim33Q99PP7 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim33Q99PP7 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms