Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim8Q99PJ2 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trim8Q99PJ2 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim8Q99PJ2 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim8Q99PJ2 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.66■□□□□ 0.1
Trim8Q99PJ2 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim8Q99PJ2 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trim8Q99PJ2 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim8Q99PJ2 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Trim8Q99PJ2 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim8Q99PJ2 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trim8Q99PJ2 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim8Q99PJ2 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trim8Q99PJ2 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim8Q99PJ2 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim8Q99PJ2 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Trim8Q99PJ2 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim8Q99PJ2 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.65■□□□□ 0.1
Trim8Q99PJ2 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim8Q99PJ2 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Trim8Q99PJ2 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.65■□□□□ 0.1
Trim8Q99PJ2 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim8Q99PJ2 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim8Q99PJ2 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim8Q99PJ2 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim8Q99PJ2 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trim8Q99PJ2 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.65■□□□□ 0.1
Trim8Q99PJ2 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trim8Q99PJ2 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Trim8Q99PJ2 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trim8Q99PJ2 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim8Q99PJ2 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim8Q99PJ2 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim8Q99PJ2 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim8Q99PJ2 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC15.65■□□□□ 0.1
Trim8Q99PJ2 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trim8Q99PJ2 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trim8Q99PJ2 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Trim8Q99PJ2 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC15.65■□□□□ 0.1
Trim8Q99PJ2 Krtap5-1-202ENSMUST00000188274 742 ntBASIC15.65■□□□□ 0.1
Trim8Q99PJ2 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim8Q99PJ2 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim8Q99PJ2 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Trim8Q99PJ2 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim8Q99PJ2 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim8Q99PJ2 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Trim8Q99PJ2 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trim8Q99PJ2 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trim8Q99PJ2 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim8Q99PJ2 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim8Q99PJ2 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trim8Q99PJ2 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.65■□□□□ 0.1
Trim8Q99PJ2 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trim8Q99PJ2 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim8Q99PJ2 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.1
Trim8Q99PJ2 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim8Q99PJ2 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim8Q99PJ2 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.64■□□□□ 0.09
Trim8Q99PJ2 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim8Q99PJ2 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC15.64■□□□□ 0.09
Trim8Q99PJ2 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC15.64■□□□□ 0.09
Trim8Q99PJ2 Gm20472-201ENSMUST00000174403 1240 ntBASIC15.64■□□□□ 0.09
Trim8Q99PJ2 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC15.64■□□□□ 0.09
Trim8Q99PJ2 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC15.64■□□□□ 0.09
Trim8Q99PJ2 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Trim8Q99PJ2 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trim8Q99PJ2 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trim8Q99PJ2 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC15.64■□□□□ 0.09
Trim8Q99PJ2 AC158538.1-201ENSMUST00000225870 294 ntBASIC15.64■□□□□ 0.09
Trim8Q99PJ2 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim8Q99PJ2 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Trim8Q99PJ2 Gm5417-201ENSMUST00000079706 384 ntBASIC15.64■□□□□ 0.09
Trim8Q99PJ2 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim8Q99PJ2 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim8Q99PJ2 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trim8Q99PJ2 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.64■□□□□ 0.09
Trim8Q99PJ2 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trim8Q99PJ2 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trim8Q99PJ2 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim8Q99PJ2 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim8Q99PJ2 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim8Q99PJ2 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.64■□□□□ 0.09
Trim8Q99PJ2 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim8Q99PJ2 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim8Q99PJ2 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim8Q99PJ2 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim8Q99PJ2 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trim8Q99PJ2 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim8Q99PJ2 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
Trim8Q99PJ2 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.63■□□□□ 0.09
Trim8Q99PJ2 Gm36967-201ENSMUST00000193814 266 ntBASIC15.63■□□□□ 0.09
Trim8Q99PJ2 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim8Q99PJ2 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trim8Q99PJ2 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim8Q99PJ2 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.63■□□□□ 0.09
Trim8Q99PJ2 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
Trim8Q99PJ2 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC15.63■□□□□ 0.09
Trim8Q99PJ2 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim8Q99PJ2 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Trim8Q99PJ2 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms