Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh18Q8VHR0 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh18Q8VHR0 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh18Q8VHR0 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh18Q8VHR0 Wnt10b-204ENSMUST00000226655 1807 ntBASIC15.39■□□□□ 0.05
Pcdh18Q8VHR0 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.39■□□□□ 0.05
Pcdh18Q8VHR0 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh18Q8VHR0 Gm3375-201ENSMUST00000203929 796 ntBASIC15.39■□□□□ 0.05
Pcdh18Q8VHR0 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC15.39■□□□□ 0.05
Pcdh18Q8VHR0 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Pcdh18Q8VHR0 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC15.39■□□□□ 0.05
Pcdh18Q8VHR0 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh18Q8VHR0 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh18Q8VHR0 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC15.39■□□□□ 0.05
Pcdh18Q8VHR0 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh18Q8VHR0 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh18Q8VHR0 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh18Q8VHR0 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Pcdh18Q8VHR0 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh18Q8VHR0 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh18Q8VHR0 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh18Q8VHR0 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh18Q8VHR0 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC15.38■□□□□ 0.05
Pcdh18Q8VHR0 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh18Q8VHR0 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh18Q8VHR0 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh18Q8VHR0 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh18Q8VHR0 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh18Q8VHR0 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh18Q8VHR0 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Pcdh18Q8VHR0 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC15.38■□□□□ 0.05
Pcdh18Q8VHR0 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh18Q8VHR0 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC15.38■□□□□ 0.05
Pcdh18Q8VHR0 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh18Q8VHR0 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC15.38■□□□□ 0.05
Pcdh18Q8VHR0 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh18Q8VHR0 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh18Q8VHR0 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Pcdh18Q8VHR0 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh18Q8VHR0 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh18Q8VHR0 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Pcdh18Q8VHR0 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh18Q8VHR0 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh18Q8VHR0 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh18Q8VHR0 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Pcdh18Q8VHR0 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh18Q8VHR0 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
Pcdh18Q8VHR0 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh18Q8VHR0 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh18Q8VHR0 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh18Q8VHR0 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh18Q8VHR0 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh18Q8VHR0 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh18Q8VHR0 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh18Q8VHR0 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh18Q8VHR0 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh18Q8VHR0 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh18Q8VHR0 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh18Q8VHR0 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh18Q8VHR0 Gm27463-201ENSMUST00000183569 57 ntBASIC15.37■□□□□ 0.05
Pcdh18Q8VHR0 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh18Q8VHR0 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh18Q8VHR0 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh18Q8VHR0 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Pcdh18Q8VHR0 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh18Q8VHR0 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh18Q8VHR0 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh18Q8VHR0 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh18Q8VHR0 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh18Q8VHR0 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.37■□□□□ 0.05
Pcdh18Q8VHR0 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh18Q8VHR0 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh18Q8VHR0 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh18Q8VHR0 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh18Q8VHR0 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh18Q8VHR0 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh18Q8VHR0 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh18Q8VHR0 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh18Q8VHR0 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC15.36■□□□□ 0.05
Pcdh18Q8VHR0 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh18Q8VHR0 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh18Q8VHR0 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh18Q8VHR0 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh18Q8VHR0 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh18Q8VHR0 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh18Q8VHR0 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC15.36■□□□□ 0.05
Pcdh18Q8VHR0 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC15.36■□□□□ 0.05
Pcdh18Q8VHR0 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC15.36■□□□□ 0.05
Pcdh18Q8VHR0 Gm21814-202ENSMUST00000203277 873 ntBASIC15.36■□□□□ 0.05
Pcdh18Q8VHR0 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC15.36■□□□□ 0.05
Pcdh18Q8VHR0 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh18Q8VHR0 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Pcdh18Q8VHR0 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh18Q8VHR0 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
Pcdh18Q8VHR0 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh18Q8VHR0 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Pcdh18Q8VHR0 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh18Q8VHR0 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh18Q8VHR0 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh18Q8VHR0 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms