Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
SNIP1Q8TAD8 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNIP1Q8TAD8 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNIP1Q8TAD8 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SNIP1Q8TAD8 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.69■□□□□ 0.42
SNIP1Q8TAD8 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNIP1Q8TAD8 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SNIP1Q8TAD8 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNIP1Q8TAD8 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.69■□□□□ 0.42
SNIP1Q8TAD8 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNIP1Q8TAD8 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNIP1Q8TAD8 AC233702.3-201ENST00000578656 1387 ntBASIC17.68■□□□□ 0.42
SNIP1Q8TAD8 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNIP1Q8TAD8 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNIP1Q8TAD8 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.68■□□□□ 0.42
SNIP1Q8TAD8 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNIP1Q8TAD8 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNIP1Q8TAD8 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SNIP1Q8TAD8 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNIP1Q8TAD8 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
SNIP1Q8TAD8 MIR1233-2-201ENST00000408138 82 ntBASIC17.68■□□□□ 0.42
SNIP1Q8TAD8 MIR1233-1-201ENST00000408722 82 ntBASIC17.68■□□□□ 0.42
SNIP1Q8TAD8 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.68■□□□□ 0.42
SNIP1Q8TAD8 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.68■□□□□ 0.42
SNIP1Q8TAD8 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.68■□□□□ 0.42
SNIP1Q8TAD8 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.68■□□□□ 0.42
SNIP1Q8TAD8 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.68■□□□□ 0.42
SNIP1Q8TAD8 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.68■□□□□ 0.42
SNIP1Q8TAD8 AP001005.1-201ENST00000571755 1248 ntBASIC17.68■□□□□ 0.42
SNIP1Q8TAD8 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SNIP1Q8TAD8 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNIP1Q8TAD8 IL9RP2-201ENST00000423948 1312 ntBASIC17.68■□□□□ 0.42
SNIP1Q8TAD8 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.68■□□□□ 0.42
SNIP1Q8TAD8 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.68■□□□□ 0.42
SNIP1Q8TAD8 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNIP1Q8TAD8 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SNIP1Q8TAD8 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.67■□□□□ 0.42
SNIP1Q8TAD8 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.67■□□□□ 0.42
SNIP1Q8TAD8 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.67■□□□□ 0.42
SNIP1Q8TAD8 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNIP1Q8TAD8 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNIP1Q8TAD8 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SNIP1Q8TAD8 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNIP1Q8TAD8 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNIP1Q8TAD8 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.67■□□□□ 0.42
SNIP1Q8TAD8 LINC00167-201ENST00000530583 1419 ntBASIC17.67■□□□□ 0.42
SNIP1Q8TAD8 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNIP1Q8TAD8 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNIP1Q8TAD8 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.67■□□□□ 0.42
SNIP1Q8TAD8 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.67■□□□□ 0.42
SNIP1Q8TAD8 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.67■□□□□ 0.42
SNIP1Q8TAD8 AC092183.1-201ENST00000469884 875 ntBASIC17.67■□□□□ 0.42
SNIP1Q8TAD8 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.67■□□□□ 0.42
SNIP1Q8TAD8 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SNIP1Q8TAD8 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.67■□□□□ 0.42
SNIP1Q8TAD8 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.67■□□□□ 0.42
SNIP1Q8TAD8 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.67■□□□□ 0.42
SNIP1Q8TAD8 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
SNIP1Q8TAD8 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNIP1Q8TAD8 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SNIP1Q8TAD8 REXO1L6P-202ENST00000619970 1078 ntBASIC17.67■□□□□ 0.42
SNIP1Q8TAD8 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNIP1Q8TAD8 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNIP1Q8TAD8 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNIP1Q8TAD8 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SNIP1Q8TAD8 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNIP1Q8TAD8 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNIP1Q8TAD8 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.66■□□□□ 0.42
SNIP1Q8TAD8 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNIP1Q8TAD8 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
SNIP1Q8TAD8 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SNIP1Q8TAD8 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SNIP1Q8TAD8 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNIP1Q8TAD8 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.66■□□□□ 0.42
SNIP1Q8TAD8 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNIP1Q8TAD8 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.66■□□□□ 0.42
SNIP1Q8TAD8 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNIP1Q8TAD8 FAM220CP-201ENST00000395253 831 ntBASIC17.66■□□□□ 0.42
SNIP1Q8TAD8 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SNIP1Q8TAD8 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SNIP1Q8TAD8 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SNIP1Q8TAD8 RNA5SP419-201ENST00000515908 135 ntBASIC17.66■□□□□ 0.42
SNIP1Q8TAD8 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.66■□□□□ 0.42
SNIP1Q8TAD8 KRT18P58-201ENST00000527480 1120 ntBASIC17.66■□□□□ 0.42
SNIP1Q8TAD8 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.66■□□□□ 0.42
SNIP1Q8TAD8 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.66■□□□□ 0.42
SNIP1Q8TAD8 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.66■□□□□ 0.42
SNIP1Q8TAD8 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.66■□□□□ 0.42
SNIP1Q8TAD8 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.66■□□□□ 0.42
SNIP1Q8TAD8 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SNIP1Q8TAD8 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.66■□□□□ 0.42
SNIP1Q8TAD8 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.66■□□□□ 0.42
SNIP1Q8TAD8 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.66■□□□□ 0.42
SNIP1Q8TAD8 AC009237.14-201ENST00000609975 1594 ntBASIC17.66■□□□□ 0.42
SNIP1Q8TAD8 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.66■□□□□ 0.42
SNIP1Q8TAD8 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.66■□□□□ 0.42
SNIP1Q8TAD8 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SNIP1Q8TAD8 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNIP1Q8TAD8 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC17.65■□□□□ 0.42
SNIP1Q8TAD8 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms