Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC19.48■□□□□ 0.71
Sf3a1Q8K4Z5 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sf3a1Q8K4Z5 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sf3a1Q8K4Z5 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sf3a1Q8K4Z5 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sf3a1Q8K4Z5 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sf3a1Q8K4Z5 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sf3a1Q8K4Z5 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sf3a1Q8K4Z5 Gm7935-201ENSMUST00000100555 1278 ntBASIC19.48■□□□□ 0.71
Sf3a1Q8K4Z5 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC19.48■□□□□ 0.71
Sf3a1Q8K4Z5 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Sf3a1Q8K4Z5 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
Sf3a1Q8K4Z5 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC19.48■□□□□ 0.71
Sf3a1Q8K4Z5 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sf3a1Q8K4Z5 Spr-ps1-201ENSMUST00000089584 605 ntBASIC19.48■□□□□ 0.71
Sf3a1Q8K4Z5 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sf3a1Q8K4Z5 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sf3a1Q8K4Z5 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Sf3a1Q8K4Z5 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sf3a1Q8K4Z5 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sf3a1Q8K4Z5 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sf3a1Q8K4Z5 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Sf3a1Q8K4Z5 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Sf3a1Q8K4Z5 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Sf3a1Q8K4Z5 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Sf3a1Q8K4Z5 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC19.47■□□□□ 0.71
Sf3a1Q8K4Z5 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sf3a1Q8K4Z5 Rbfox2-206ENSMUST00000227314 1810 ntBASIC19.47■□□□□ 0.71
Sf3a1Q8K4Z5 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
Sf3a1Q8K4Z5 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sf3a1Q8K4Z5 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC19.47■□□□□ 0.71
Sf3a1Q8K4Z5 Gm25406-201ENSMUST00000157599 105 ntBASIC19.47■□□□□ 0.71
Sf3a1Q8K4Z5 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC19.47■□□□□ 0.71
Sf3a1Q8K4Z5 Gm17971-201ENSMUST00000190239 806 ntBASIC19.47■□□□□ 0.71
Sf3a1Q8K4Z5 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sf3a1Q8K4Z5 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sf3a1Q8K4Z5 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sf3a1Q8K4Z5 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Sf3a1Q8K4Z5 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sf3a1Q8K4Z5 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sf3a1Q8K4Z5 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Sf3a1Q8K4Z5 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Sf3a1Q8K4Z5 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Sf3a1Q8K4Z5 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC19.47■□□□□ 0.71
Sf3a1Q8K4Z5 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sf3a1Q8K4Z5 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sf3a1Q8K4Z5 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sf3a1Q8K4Z5 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Sf3a1Q8K4Z5 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sf3a1Q8K4Z5 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sf3a1Q8K4Z5 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Sf3a1Q8K4Z5 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sf3a1Q8K4Z5 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sf3a1Q8K4Z5 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Sf3a1Q8K4Z5 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC19.46■□□□□ 0.71
Sf3a1Q8K4Z5 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Sf3a1Q8K4Z5 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Sf3a1Q8K4Z5 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Sf3a1Q8K4Z5 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Sf3a1Q8K4Z5 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sf3a1Q8K4Z5 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Sf3a1Q8K4Z5 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sf3a1Q8K4Z5 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sf3a1Q8K4Z5 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sf3a1Q8K4Z5 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sf3a1Q8K4Z5 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sf3a1Q8K4Z5 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sf3a1Q8K4Z5 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sf3a1Q8K4Z5 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC19.46■□□□□ 0.71
Sf3a1Q8K4Z5 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sf3a1Q8K4Z5 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sf3a1Q8K4Z5 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sf3a1Q8K4Z5 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sf3a1Q8K4Z5 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Sf3a1Q8K4Z5 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Sf3a1Q8K4Z5 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sf3a1Q8K4Z5 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sf3a1Q8K4Z5 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Sf3a1Q8K4Z5 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Sf3a1Q8K4Z5 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sf3a1Q8K4Z5 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sf3a1Q8K4Z5 Gm25745-201ENSMUST00000174945 133 ntBASIC19.45■□□□□ 0.7
Sf3a1Q8K4Z5 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Sf3a1Q8K4Z5 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Sf3a1Q8K4Z5 Gm34391-201ENSMUST00000203706 907 ntBASIC19.45■□□□□ 0.7
Sf3a1Q8K4Z5 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
Sf3a1Q8K4Z5 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sf3a1Q8K4Z5 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Sf3a1Q8K4Z5 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sf3a1Q8K4Z5 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Sf3a1Q8K4Z5 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sf3a1Q8K4Z5 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sf3a1Q8K4Z5 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sf3a1Q8K4Z5 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Sf3a1Q8K4Z5 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sf3a1Q8K4Z5 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sf3a1Q8K4Z5 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC19.44■□□□□ 0.7
Sf3a1Q8K4Z5 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sf3a1Q8K4Z5 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sf3a1Q8K4Z5 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC19.44■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms