Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Cystm1Q8K353 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cystm1Q8K353 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
Cystm1Q8K353 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
Cystm1Q8K353 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cystm1Q8K353 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cystm1Q8K353 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cystm1Q8K353 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC10.05□□□□□ -0.8
Cystm1Q8K353 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Cystm1Q8K353 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC10.05□□□□□ -0.8
Cystm1Q8K353 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cystm1Q8K353 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC10.05□□□□□ -0.8
Cystm1Q8K353 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cystm1Q8K353 Phf7-203ENSMUST00000226565 1971 ntBASIC10.05□□□□□ -0.8
Cystm1Q8K353 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cystm1Q8K353 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cystm1Q8K353 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Cystm1Q8K353 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC10.04□□□□□ -0.8
Cystm1Q8K353 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cystm1Q8K353 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cystm1Q8K353 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cystm1Q8K353 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Cystm1Q8K353 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cystm1Q8K353 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cystm1Q8K353 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Cystm1Q8K353 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Cystm1Q8K353 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cystm1Q8K353 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC10.04□□□□□ -0.8
Cystm1Q8K353 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
Cystm1Q8K353 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cystm1Q8K353 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
Cystm1Q8K353 Gm21814-202ENSMUST00000203277 873 ntBASIC10.04□□□□□ -0.8
Cystm1Q8K353 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cystm1Q8K353 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Cystm1Q8K353 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cystm1Q8K353 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cystm1Q8K353 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cystm1Q8K353 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cystm1Q8K353 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Cystm1Q8K353 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cystm1Q8K353 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
Cystm1Q8K353 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cystm1Q8K353 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Cystm1Q8K353 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cystm1Q8K353 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Cystm1Q8K353 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cystm1Q8K353 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cystm1Q8K353 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Cystm1Q8K353 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Cystm1Q8K353 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Cystm1Q8K353 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cystm1Q8K353 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC10.03□□□□□ -0.8
Cystm1Q8K353 Sybu-209ENSMUST00000228639 4113 ntBASIC10.03□□□□□ -0.8
Cystm1Q8K353 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cystm1Q8K353 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cystm1Q8K353 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC10.03□□□□□ -0.8
Cystm1Q8K353 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cystm1Q8K353 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cystm1Q8K353 CT030684.3-201ENSMUST00000227308 2445 ntBASIC10.03□□□□□ -0.8
Cystm1Q8K353 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
Cystm1Q8K353 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC10.03□□□□□ -0.8
Cystm1Q8K353 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC10.03□□□□□ -0.8
Cystm1Q8K353 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC10.03□□□□□ -0.8
Cystm1Q8K353 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Cystm1Q8K353 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC10.03□□□□□ -0.8
Cystm1Q8K353 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cystm1Q8K353 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC10.03□□□□□ -0.8
Cystm1Q8K353 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC10.03□□□□□ -0.8
Cystm1Q8K353 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Cystm1Q8K353 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Cystm1Q8K353 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cystm1Q8K353 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cystm1Q8K353 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cystm1Q8K353 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cystm1Q8K353 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Cystm1Q8K353 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Cystm1Q8K353 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC10.03□□□□□ -0.8
Cystm1Q8K353 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cystm1Q8K353 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC10.03□□□□□ -0.8
Cystm1Q8K353 Gm45560-201ENSMUST00000211492 1472 ntBASIC10.03□□□□□ -0.8
Cystm1Q8K353 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cystm1Q8K353 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Cystm1Q8K353 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cystm1Q8K353 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC10.03□□□□□ -0.8
Cystm1Q8K353 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC10.03□□□□□ -0.8
Cystm1Q8K353 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cystm1Q8K353 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cystm1Q8K353 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cystm1Q8K353 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.8
Cystm1Q8K353 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.8
Cystm1Q8K353 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Cystm1Q8K353 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Cystm1Q8K353 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Cystm1Q8K353 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.8
Cystm1Q8K353 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Cystm1Q8K353 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Cystm1Q8K353 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Cystm1Q8K353 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Cystm1Q8K353 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC10.02□□□□□ -0.81
Cystm1Q8K353 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms