Protein–RNA interactions for Protein: Q8CG48

Smc2, Structural maintenance of chromosomes protein 2, mousemouse

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc2Q8CG48 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smc2Q8CG48 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Smc2Q8CG48 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.51
Smc2Q8CG48 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Smc2Q8CG48 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Smc2Q8CG48 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Smc2Q8CG48 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Smc2Q8CG48 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc2Q8CG48 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc2Q8CG48 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Smc2Q8CG48 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Smc2Q8CG48 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc2Q8CG48 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc2Q8CG48 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc2Q8CG48 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc2Q8CG48 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc2Q8CG48 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc2Q8CG48 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Smc2Q8CG48 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc2Q8CG48 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC18.26■□□□□ 0.51
Smc2Q8CG48 Gm45328-201ENSMUST00000210942 917 ntBASIC18.26■□□□□ 0.51
Smc2Q8CG48 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc2Q8CG48 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc2Q8CG48 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc2Q8CG48 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Smc2Q8CG48 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc2Q8CG48 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Smc2Q8CG48 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc2Q8CG48 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc2Q8CG48 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc2Q8CG48 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC18.26■□□□□ 0.51
Smc2Q8CG48 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Smc2Q8CG48 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Smc2Q8CG48 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Smc2Q8CG48 Gm8258-201ENSMUST00000055593 1449 ntBASIC18.25■□□□□ 0.51
Smc2Q8CG48 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC18.25■□□□□ 0.51
Smc2Q8CG48 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smc2Q8CG48 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Smc2Q8CG48 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Smc2Q8CG48 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Smc2Q8CG48 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smc2Q8CG48 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smc2Q8CG48 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smc2Q8CG48 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Smc2Q8CG48 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smc2Q8CG48 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smc2Q8CG48 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
Smc2Q8CG48 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Smc2Q8CG48 Gm11950-201ENSMUST00000121615 838 ntBASIC18.24■□□□□ 0.51
Smc2Q8CG48 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Smc2Q8CG48 CT009713.7-201ENSMUST00000224689 571 ntBASIC18.24■□□□□ 0.51
Smc2Q8CG48 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smc2Q8CG48 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Smc2Q8CG48 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smc2Q8CG48 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smc2Q8CG48 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Smc2Q8CG48 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
Smc2Q8CG48 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smc2Q8CG48 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smc2Q8CG48 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Smc2Q8CG48 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smc2Q8CG48 AC153526.5-201ENSMUST00000218661 2147 ntBASIC18.23■□□□□ 0.51
Smc2Q8CG48 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smc2Q8CG48 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smc2Q8CG48 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Smc2Q8CG48 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smc2Q8CG48 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smc2Q8CG48 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smc2Q8CG48 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smc2Q8CG48 Gm42473-201ENSMUST00000201056 2291 ntBASIC18.23■□□□□ 0.51
Smc2Q8CG48 Gm44729-201ENSMUST00000206759 2052 ntBASIC18.23■□□□□ 0.51
Smc2Q8CG48 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Smc2Q8CG48 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Smc2Q8CG48 Mir7071-201ENSMUST00000184847 69 ntBASIC18.23■□□□□ 0.51
Smc2Q8CG48 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smc2Q8CG48 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smc2Q8CG48 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smc2Q8CG48 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smc2Q8CG48 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smc2Q8CG48 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
Smc2Q8CG48 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
Smc2Q8CG48 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Smc2Q8CG48 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smc2Q8CG48 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smc2Q8CG48 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Smc2Q8CG48 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smc2Q8CG48 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Smc2Q8CG48 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Smc2Q8CG48 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smc2Q8CG48 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smc2Q8CG48 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smc2Q8CG48 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smc2Q8CG48 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smc2Q8CG48 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smc2Q8CG48 Gm23634-201ENSMUST00000175071 91 ntBASIC18.22■□□□□ 0.51
Smc2Q8CG48 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Smc2Q8CG48 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smc2Q8CG48 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smc2Q8CG48 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smc2Q8CG48 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms