Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Clcn1Q64347 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Clcn1Q64347 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC20.1■□□□□ 0.81
Clcn1Q64347 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Clcn1Q64347 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Clcn1Q64347 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Clcn1Q64347 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Clcn1Q64347 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Clcn1Q64347 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Clcn1Q64347 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Clcn1Q64347 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC20.1■□□□□ 0.81
Clcn1Q64347 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Clcn1Q64347 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC20.1■□□□□ 0.81
Clcn1Q64347 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Clcn1Q64347 Gm26308-201ENSMUST00000157768 69 ntBASIC20.1■□□□□ 0.81
Clcn1Q64347 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC20.1■□□□□ 0.81
Clcn1Q64347 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Clcn1Q64347 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC20.1■□□□□ 0.81
Clcn1Q64347 Gm44945-201ENSMUST00000206764 1187 ntBASIC20.1■□□□□ 0.81
Clcn1Q64347 AC174742.1-201ENSMUST00000218272 304 ntBASIC20.1■□□□□ 0.81
Clcn1Q64347 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Clcn1Q64347 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Clcn1Q64347 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Clcn1Q64347 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Clcn1Q64347 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Clcn1Q64347 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC20.1■□□□□ 0.81
Clcn1Q64347 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Clcn1Q64347 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Clcn1Q64347 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Clcn1Q64347 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Clcn1Q64347 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Clcn1Q64347 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC20.1■□□□□ 0.81
Clcn1Q64347 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Clcn1Q64347 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Clcn1Q64347 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Clcn1Q64347 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Clcn1Q64347 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Clcn1Q64347 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Clcn1Q64347 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Clcn1Q64347 Gm4913-201ENSMUST00000117075 1290 ntBASIC20.09■□□□□ 0.81
Clcn1Q64347 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Clcn1Q64347 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Clcn1Q64347 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC20.09■□□□□ 0.81
Clcn1Q64347 Gm4899-201ENSMUST00000178708 719 ntBASIC20.09■□□□□ 0.81
Clcn1Q64347 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Clcn1Q64347 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Clcn1Q64347 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Clcn1Q64347 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Clcn1Q64347 Wnt10b-206ENSMUST00000228546 2709 ntBASIC20.09■□□□□ 0.81
Clcn1Q64347 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Clcn1Q64347 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC20.09■□□□□ 0.81
Clcn1Q64347 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Clcn1Q64347 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Clcn1Q64347 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Clcn1Q64347 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Clcn1Q64347 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC20.08■□□□□ 0.81
Clcn1Q64347 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
Clcn1Q64347 Gm27300-201ENSMUST00000184085 97 ntBASIC20.08■□□□□ 0.81
Clcn1Q64347 Gm27335-201ENSMUST00000184758 97 ntBASIC20.08■□□□□ 0.81
Clcn1Q64347 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Clcn1Q64347 AC147366.1-201ENSMUST00000227671 852 ntBASIC20.08■□□□□ 0.81
Clcn1Q64347 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Clcn1Q64347 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Clcn1Q64347 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Clcn1Q64347 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Clcn1Q64347 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC20.08■□□□□ 0.8
Clcn1Q64347 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Clcn1Q64347 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Clcn1Q64347 Gm8784-201ENSMUST00000222096 1435 ntBASIC20.08■□□□□ 0.8
Clcn1Q64347 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Clcn1Q64347 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clcn1Q64347 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clcn1Q64347 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Clcn1Q64347 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Clcn1Q64347 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clcn1Q64347 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Clcn1Q64347 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clcn1Q64347 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clcn1Q64347 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clcn1Q64347 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Clcn1Q64347 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clcn1Q64347 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC20.07■□□□□ 0.8
Clcn1Q64347 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clcn1Q64347 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC20.07■□□□□ 0.8
Clcn1Q64347 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clcn1Q64347 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clcn1Q64347 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Clcn1Q64347 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Clcn1Q64347 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clcn1Q64347 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clcn1Q64347 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Clcn1Q64347 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clcn1Q64347 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clcn1Q64347 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clcn1Q64347 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Clcn1Q64347 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Clcn1Q64347 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clcn1Q64347 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clcn1Q64347 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC20.06■□□□□ 0.8
Clcn1Q64347 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms