Protein–RNA interactions for Protein: Q60855

Ripk1, Receptor-interacting serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk1Q60855 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ripk1Q60855 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.05■□□□□ -0
Ripk1Q60855 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ripk1Q60855 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ripk1Q60855 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Ripk1Q60855 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
Ripk1Q60855 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Ripk1Q60855 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ripk1Q60855 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ripk1Q60855 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ripk1Q60855 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ripk1Q60855 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Ripk1Q60855 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ripk1Q60855 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ripk1Q60855 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ripk1Q60855 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
Ripk1Q60855 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Ripk1Q60855 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ripk1Q60855 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ripk1Q60855 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ripk1Q60855 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Ripk1Q60855 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ripk1Q60855 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.04■□□□□ -0
Ripk1Q60855 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ripk1Q60855 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.04■□□□□ -0
Ripk1Q60855 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Ripk1Q60855 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ripk1Q60855 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ripk1Q60855 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ripk1Q60855 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ripk1Q60855 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ripk1Q60855 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC15.04■□□□□ -0
Ripk1Q60855 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ripk1Q60855 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ripk1Q60855 AC125350.1-201ENSMUST00000225115 903 ntBASIC15.04■□□□□ -0
Ripk1Q60855 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ripk1Q60855 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ripk1Q60855 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.04■□□□□ -0
Ripk1Q60855 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.04■□□□□ -0
Ripk1Q60855 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ripk1Q60855 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Ripk1Q60855 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ripk1Q60855 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ripk1Q60855 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ripk1Q60855 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ripk1Q60855 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ripk1Q60855 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Ripk1Q60855 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ripk1Q60855 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.04■□□□□ -0
Ripk1Q60855 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Ripk1Q60855 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ripk1Q60855 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ripk1Q60855 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Ripk1Q60855 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Ripk1Q60855 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ripk1Q60855 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Ripk1Q60855 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ripk1Q60855 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Ripk1Q60855 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Ripk1Q60855 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ripk1Q60855 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC15.03■□□□□ -0
Ripk1Q60855 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ripk1Q60855 Gm29518-201ENSMUST00000190858 372 ntBASIC15.03■□□□□ -0
Ripk1Q60855 Gm17808-201ENSMUST00000200859 894 ntBASIC15.03■□□□□ -0
Ripk1Q60855 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC15.03■□□□□ -0
Ripk1Q60855 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ripk1Q60855 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ripk1Q60855 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC15.03■□□□□ -0
Ripk1Q60855 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Ripk1Q60855 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ripk1Q60855 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ripk1Q60855 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Ripk1Q60855 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ripk1Q60855 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Ripk1Q60855 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ripk1Q60855 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ripk1Q60855 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Ripk1Q60855 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.03■□□□□ -0
Ripk1Q60855 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ripk1Q60855 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ripk1Q60855 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ripk1Q60855 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.02■□□□□ -0
Ripk1Q60855 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ripk1Q60855 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.02■□□□□ -0
Ripk1Q60855 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
Ripk1Q60855 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Ripk1Q60855 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ripk1Q60855 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
Ripk1Q60855 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ripk1Q60855 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ripk1Q60855 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ripk1Q60855 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Ripk1Q60855 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Ripk1Q60855 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC15.02■□□□□ -0
Ripk1Q60855 Gm45328-201ENSMUST00000210942 917 ntBASIC15.02■□□□□ -0
Ripk1Q60855 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ripk1Q60855 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ripk1Q60855 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.02□□□□□ -0.01
Ripk1Q60855 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ripk1Q60855 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms