Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Trav3-3Q5R1C3 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC12.02□□□□□ -0.49
Trav3-3Q5R1C3 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav3-3Q5R1C3 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav3-3Q5R1C3 Gm42555-201ENSMUST00000199304 1039 ntBASIC12.02□□□□□ -0.49
Trav3-3Q5R1C3 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav3-3Q5R1C3 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav3-3Q5R1C3 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav3-3Q5R1C3 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav3-3Q5R1C3 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav3-3Q5R1C3 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav3-3Q5R1C3 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav3-3Q5R1C3 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav3-3Q5R1C3 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav3-3Q5R1C3 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav3-3Q5R1C3 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav3-3Q5R1C3 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Trav3-3Q5R1C3 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav3-3Q5R1C3 Gm37728-201ENSMUST00000195025 2292 ntBASIC12.02□□□□□ -0.49
Trav3-3Q5R1C3 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav3-3Q5R1C3 Gm38058-201ENSMUST00000194323 4368 ntBASIC12.02□□□□□ -0.49
Trav3-3Q5R1C3 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav3-3Q5R1C3 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3-3Q5R1C3 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3-3Q5R1C3 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav3-3Q5R1C3 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3-3Q5R1C3 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3-3Q5R1C3 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3-3Q5R1C3 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3-3Q5R1C3 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3-3Q5R1C3 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trav3-3Q5R1C3 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3-3Q5R1C3 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Trav3-3Q5R1C3 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3-3Q5R1C3 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3-3Q5R1C3 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Trav3-3Q5R1C3 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3-3Q5R1C3 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3-3Q5R1C3 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3-3Q5R1C3 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3-3Q5R1C3 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3-3Q5R1C3 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3-3Q5R1C3 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3-3Q5R1C3 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3-3Q5R1C3 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3-3Q5R1C3 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3-3Q5R1C3 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3-3Q5R1C3 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3-3Q5R1C3 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3-3Q5R1C3 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3-3Q5R1C3 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav3-3Q5R1C3 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav3-3Q5R1C3 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav3-3Q5R1C3 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav3-3Q5R1C3 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav3-3Q5R1C3 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav3-3Q5R1C3 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav3-3Q5R1C3 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav3-3Q5R1C3 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav3-3Q5R1C3 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav3-3Q5R1C3 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav3-3Q5R1C3 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav3-3Q5R1C3 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav3-3Q5R1C3 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Trav3-3Q5R1C3 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav3-3Q5R1C3 Gm10849-201ENSMUST00000100397 618 ntBASIC12□□□□□ -0.49
Trav3-3Q5R1C3 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC12□□□□□ -0.49
Trav3-3Q5R1C3 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Trav3-3Q5R1C3 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav3-3Q5R1C3 Wnt10b-205ENSMUST00000226846 1204 ntBASIC12□□□□□ -0.49
Trav3-3Q5R1C3 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav3-3Q5R1C3 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trav3-3Q5R1C3 Gm45003-201ENSMUST00000205875 2158 ntBASIC12□□□□□ -0.49
Trav3-3Q5R1C3 Gm42901-201ENSMUST00000197735 3171 ntBASIC12□□□□□ -0.49
Trav3-3Q5R1C3 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Trav3-3Q5R1C3 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trav3-3Q5R1C3 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC12□□□□□ -0.49
Trav3-3Q5R1C3 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav3-3Q5R1C3 AC108858.1-201ENSMUST00000228461 1498 ntBASIC12□□□□□ -0.49
Trav3-3Q5R1C3 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav3-3Q5R1C3 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav3-3Q5R1C3 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav3-3Q5R1C3 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12□□□□□ -0.49
Trav3-3Q5R1C3 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav3-3Q5R1C3 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3-3Q5R1C3 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3-3Q5R1C3 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3-3Q5R1C3 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Trav3-3Q5R1C3 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trav3-3Q5R1C3 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3-3Q5R1C3 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC11.99□□□□□ -0.49
Trav3-3Q5R1C3 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3-3Q5R1C3 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC11.99□□□□□ -0.49
Trav3-3Q5R1C3 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav3-3Q5R1C3 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3-3Q5R1C3 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3-3Q5R1C3 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3-3Q5R1C3 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3-3Q5R1C3 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3-3Q5R1C3 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms