Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim63Q38HM4 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim63Q38HM4 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim63Q38HM4 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.22□□□□□ -0.29
Trim63Q38HM4 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim63Q38HM4 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim63Q38HM4 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Trim63Q38HM4 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC13.22□□□□□ -0.29
Trim63Q38HM4 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.22□□□□□ -0.29
Trim63Q38HM4 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trim63Q38HM4 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim63Q38HM4 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim63Q38HM4 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim63Q38HM4 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Trim63Q38HM4 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC13.21□□□□□ -0.29
Trim63Q38HM4 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trim63Q38HM4 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim63Q38HM4 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim63Q38HM4 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim63Q38HM4 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.21□□□□□ -0.29
Trim63Q38HM4 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim63Q38HM4 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim63Q38HM4 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim63Q38HM4 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim63Q38HM4 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim63Q38HM4 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC13.21□□□□□ -0.29
Trim63Q38HM4 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trim63Q38HM4 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Trim63Q38HM4 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim63Q38HM4 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim63Q38HM4 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim63Q38HM4 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.3
Trim63Q38HM4 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim63Q38HM4 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim63Q38HM4 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Trim63Q38HM4 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim63Q38HM4 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim63Q38HM4 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim63Q38HM4 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Trim63Q38HM4 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Trim63Q38HM4 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim63Q38HM4 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim63Q38HM4 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim63Q38HM4 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim63Q38HM4 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim63Q38HM4 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim63Q38HM4 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim63Q38HM4 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim63Q38HM4 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim63Q38HM4 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim63Q38HM4 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim63Q38HM4 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13.2□□□□□ -0.3
Trim63Q38HM4 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim63Q38HM4 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim63Q38HM4 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim63Q38HM4 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim63Q38HM4 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim63Q38HM4 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim63Q38HM4 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim63Q38HM4 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim63Q38HM4 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim63Q38HM4 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Trim63Q38HM4 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
Trim63Q38HM4 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim63Q38HM4 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim63Q38HM4 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim63Q38HM4 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trim63Q38HM4 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trim63Q38HM4 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Trim63Q38HM4 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim63Q38HM4 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim63Q38HM4 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trim63Q38HM4 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Trim63Q38HM4 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim63Q38HM4 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trim63Q38HM4 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim63Q38HM4 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim63Q38HM4 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim63Q38HM4 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim63Q38HM4 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim63Q38HM4 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC13.19□□□□□ -0.3
Trim63Q38HM4 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim63Q38HM4 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim63Q38HM4 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim63Q38HM4 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim63Q38HM4 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim63Q38HM4 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim63Q38HM4 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim63Q38HM4 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim63Q38HM4 Gm10418-201ENSMUST00000100943 576 ntBASIC13.19□□□□□ -0.3
Trim63Q38HM4 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC13.19□□□□□ -0.3
Trim63Q38HM4 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC13.19□□□□□ -0.3
Trim63Q38HM4 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim63Q38HM4 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim63Q38HM4 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Trim63Q38HM4 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim63Q38HM4 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim63Q38HM4 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim63Q38HM4 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim63Q38HM4 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms