Protein–RNA interactions for Protein: P62812

Gabra1, Gamma-aminobutyric acid receptor subunit alpha-1, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabra1P62812 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Gabra1P62812 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Gabra1P62812 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Gabra1P62812 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Gabra1P62812 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC13.46□□□□□ -0.25
Gabra1P62812 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Gabra1P62812 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Gabra1P62812 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Gabra1P62812 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Gabra1P62812 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Gabra1P62812 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.46□□□□□ -0.25
Gabra1P62812 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Gabra1P62812 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Gabra1P62812 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC13.46□□□□□ -0.25
Gabra1P62812 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Gabra1P62812 Gm12896-201ENSMUST00000118430 226 ntBASIC13.46□□□□□ -0.25
Gabra1P62812 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC13.46□□□□□ -0.25
Gabra1P62812 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC13.46□□□□□ -0.25
Gabra1P62812 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Gabra1P62812 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Gabra1P62812 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Gabra1P62812 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Gabra1P62812 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Gabra1P62812 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Gabra1P62812 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Gabra1P62812 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Gabra1P62812 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Gabra1P62812 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Gabra1P62812 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Gabra1P62812 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Gabra1P62812 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Gabra1P62812 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Gabra1P62812 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Gabra1P62812 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Gabra1P62812 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Gabra1P62812 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.45□□□□□ -0.26
Gabra1P62812 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Gabra1P62812 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Gabra1P62812 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Gabra1P62812 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Gabra1P62812 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Gabra1P62812 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Gabra1P62812 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Gabra1P62812 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Gabra1P62812 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Gabra1P62812 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Gabra1P62812 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Gabra1P62812 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Gabra1P62812 Gm27405-201ENSMUST00000184201 112 ntBASIC13.45□□□□□ -0.26
Gabra1P62812 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC13.45□□□□□ -0.26
Gabra1P62812 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Gabra1P62812 Slc35b2-207ENSMUST00000226086 850 ntBASIC13.45□□□□□ -0.26
Gabra1P62812 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Gabra1P62812 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Gabra1P62812 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Gabra1P62812 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Gabra1P62812 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.45□□□□□ -0.26
Gabra1P62812 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Gabra1P62812 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Gabra1P62812 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Gabra1P62812 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Gabra1P62812 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC13.45□□□□□ -0.26
Gabra1P62812 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.45□□□□□ -0.26
Gabra1P62812 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Gabra1P62812 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.45□□□□□ -0.26
Gabra1P62812 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Gabra1P62812 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Gabra1P62812 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Gabra1P62812 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Gabra1P62812 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Gabra1P62812 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Gabra1P62812 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Gabra1P62812 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC13.44□□□□□ -0.26
Gabra1P62812 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.44□□□□□ -0.26
Gabra1P62812 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC13.44□□□□□ -0.26
Gabra1P62812 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Gabra1P62812 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC13.44□□□□□ -0.26
Gabra1P62812 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Gabra1P62812 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC13.44□□□□□ -0.26
Gabra1P62812 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Gabra1P62812 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Gabra1P62812 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Gabra1P62812 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Gabra1P62812 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Gabra1P62812 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Gabra1P62812 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Gabra1P62812 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Gabra1P62812 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC13.44□□□□□ -0.26
Gabra1P62812 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Gabra1P62812 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Gabra1P62812 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Gabra1P62812 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Gabra1P62812 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Gabra1P62812 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Gabra1P62812 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Gabra1P62812 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Gabra1P62812 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
Gabra1P62812 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Gabra1P62812 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Gabra1P62812 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms