Protein–RNA interactions for Protein: P61079

Ube2d3, Ubiquitin-conjugating enzyme E2 D3, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2d3P61079 Gm29707-201ENSMUST00000196325 491 ntBASIC11.43□□□□□ -0.58
Ube2d3P61079 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Ube2d3P61079 AC159205.6-201ENSMUST00000224935 887 ntBASIC11.43□□□□□ -0.58
Ube2d3P61079 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Ube2d3P61079 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ube2d3P61079 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC11.43□□□□□ -0.58
Ube2d3P61079 Gm45760-201ENSMUST00000212190 1782 ntBASIC11.43□□□□□ -0.58
Ube2d3P61079 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ube2d3P61079 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ube2d3P61079 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ube2d3P61079 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ube2d3P61079 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC11.43□□□□□ -0.58
Ube2d3P61079 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Ube2d3P61079 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Ube2d3P61079 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ube2d3P61079 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ube2d3P61079 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ube2d3P61079 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Ube2d3P61079 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ube2d3P61079 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ube2d3P61079 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ube2d3P61079 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ube2d3P61079 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ube2d3P61079 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ube2d3P61079 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ube2d3P61079 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ube2d3P61079 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ube2d3P61079 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC11.42□□□□□ -0.58
Ube2d3P61079 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Ube2d3P61079 Ccdc166-201ENSMUST00000182172 2584 ntBASIC11.42□□□□□ -0.58
Ube2d3P61079 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ube2d3P61079 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Ube2d3P61079 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ube2d3P61079 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC11.42□□□□□ -0.58
Ube2d3P61079 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ube2d3P61079 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ube2d3P61079 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ube2d3P61079 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ube2d3P61079 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC11.42□□□□□ -0.58
Ube2d3P61079 Gm14464-201ENSMUST00000119658 1254 ntBASIC11.42□□□□□ -0.58
Ube2d3P61079 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC11.42□□□□□ -0.58
Ube2d3P61079 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ube2d3P61079 Gm3272-201ENSMUST00000181181 1229 ntBASIC11.42□□□□□ -0.58
Ube2d3P61079 Gm36967-201ENSMUST00000193814 266 ntBASIC11.42□□□□□ -0.58
Ube2d3P61079 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ube2d3P61079 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ube2d3P61079 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ube2d3P61079 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ube2d3P61079 Gm10566-201ENSMUST00000086739 996 ntBASIC11.42□□□□□ -0.58
Ube2d3P61079 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ube2d3P61079 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ube2d3P61079 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ube2d3P61079 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ube2d3P61079 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Ube2d3P61079 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ube2d3P61079 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Ube2d3P61079 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ube2d3P61079 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ube2d3P61079 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ube2d3P61079 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ube2d3P61079 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ube2d3P61079 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ube2d3P61079 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ube2d3P61079 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ube2d3P61079 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ube2d3P61079 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC11.42□□□□□ -0.58
Ube2d3P61079 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC11.42□□□□□ -0.58
Ube2d3P61079 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ube2d3P61079 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Ube2d3P61079 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ube2d3P61079 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ube2d3P61079 Gm10584-201ENSMUST00000207036 2628 ntBASIC11.41□□□□□ -0.58
Ube2d3P61079 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ube2d3P61079 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ube2d3P61079 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ube2d3P61079 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ube2d3P61079 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC11.41□□□□□ -0.58
Ube2d3P61079 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ube2d3P61079 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Ube2d3P61079 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ube2d3P61079 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Ube2d3P61079 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ube2d3P61079 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ube2d3P61079 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ube2d3P61079 Gm20472-201ENSMUST00000174403 1240 ntBASIC11.41□□□□□ -0.58
Ube2d3P61079 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC11.41□□□□□ -0.58
Ube2d3P61079 Mir1668-201ENSMUST00000184114 107 ntBASIC11.41□□□□□ -0.58
Ube2d3P61079 AL672049.1-201ENSMUST00000197943 91 ntBASIC11.41□□□□□ -0.58
Ube2d3P61079 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ube2d3P61079 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ube2d3P61079 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC11.41□□□□□ -0.58
Ube2d3P61079 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ube2d3P61079 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ube2d3P61079 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ube2d3P61079 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ube2d3P61079 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ube2d3P61079 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ube2d3P61079 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
Ube2d3P61079 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ube2d3P61079 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms