Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm3543D3Z235 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm3543D3Z235 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm3543D3Z235 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm3543D3Z235 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm3543D3Z235 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm3543D3Z235 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm3543D3Z235 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Gm3543D3Z235 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Gm3543D3Z235 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm3543D3Z235 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.41□□□□□ -0.1
Gm3543D3Z235 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Gm3543D3Z235 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Gm3543D3Z235 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.41□□□□□ -0.1
Gm3543D3Z235 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm3543D3Z235 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm3543D3Z235 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Gm3543D3Z235 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm3543D3Z235 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm3543D3Z235 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm3543D3Z235 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Gm3543D3Z235 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Gm3543D3Z235 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Gm3543D3Z235 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC14.41□□□□□ -0.1
Gm3543D3Z235 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.41□□□□□ -0.1
Gm3543D3Z235 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.41□□□□□ -0.1
Gm3543D3Z235 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm3543D3Z235 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Gm3543D3Z235 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Gm3543D3Z235 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm3543D3Z235 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm3543D3Z235 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Gm3543D3Z235 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm3543D3Z235 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm3543D3Z235 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm3543D3Z235 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Gm3543D3Z235 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Gm3543D3Z235 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Gm3543D3Z235 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm3543D3Z235 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Gm3543D3Z235 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC14.4□□□□□ -0.1
Gm3543D3Z235 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm3543D3Z235 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.4□□□□□ -0.1
Gm3543D3Z235 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm3543D3Z235 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.4□□□□□ -0.1
Gm3543D3Z235 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Gm3543D3Z235 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Gm3543D3Z235 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Gm3543D3Z235 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm3543D3Z235 Gm13312-201ENSMUST00000119631 718 ntBASIC14.4□□□□□ -0.1
Gm3543D3Z235 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Gm3543D3Z235 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm3543D3Z235 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC14.4□□□□□ -0.1
Gm3543D3Z235 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.4□□□□□ -0.1
Gm3543D3Z235 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm3543D3Z235 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm3543D3Z235 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Gm3543D3Z235 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm3543D3Z235 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Gm3543D3Z235 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm3543D3Z235 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm3543D3Z235 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Gm3543D3Z235 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm3543D3Z235 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm3543D3Z235 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Gm3543D3Z235 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Gm3543D3Z235 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Gm3543D3Z235 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm3543D3Z235 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Gm3543D3Z235 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm3543D3Z235 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.39□□□□□ -0.11
Gm3543D3Z235 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm3543D3Z235 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm3543D3Z235 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm3543D3Z235 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm3543D3Z235 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14.39□□□□□ -0.11
Gm3543D3Z235 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm3543D3Z235 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm3543D3Z235 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Gm3543D3Z235 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Gm3543D3Z235 Gm15372-201ENSMUST00000120729 834 ntBASIC14.39□□□□□ -0.11
Gm3543D3Z235 Gm12895-201ENSMUST00000122214 226 ntBASIC14.39□□□□□ -0.11
Gm3543D3Z235 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Gm3543D3Z235 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Gm3543D3Z235 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm3543D3Z235 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Gm3543D3Z235 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.39□□□□□ -0.11
Gm3543D3Z235 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Gm3543D3Z235 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC14.39□□□□□ -0.11
Gm3543D3Z235 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
Gm3543D3Z235 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm3543D3Z235 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm3543D3Z235 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm3543D3Z235 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Gm3543D3Z235 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm3543D3Z235 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm3543D3Z235 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Gm3543D3Z235 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Gm3543D3Z235 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Gm3543D3Z235 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms