Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp42B2RQC2 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp42B2RQC2 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp42B2RQC2 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp42B2RQC2 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp42B2RQC2 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp42B2RQC2 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC18.62■□□□□ 0.57
Usp42B2RQC2 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp42B2RQC2 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp42B2RQC2 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp42B2RQC2 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Usp42B2RQC2 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC18.61■□□□□ 0.57
Usp42B2RQC2 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp42B2RQC2 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Usp42B2RQC2 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
Usp42B2RQC2 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC18.61■□□□□ 0.57
Usp42B2RQC2 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC18.61■□□□□ 0.57
Usp42B2RQC2 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC18.61■□□□□ 0.57
Usp42B2RQC2 Umpk-ps-201ENSMUST00000211897 827 ntBASIC18.61■□□□□ 0.57
Usp42B2RQC2 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp42B2RQC2 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Usp42B2RQC2 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Usp42B2RQC2 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
Usp42B2RQC2 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp42B2RQC2 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp42B2RQC2 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
Usp42B2RQC2 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Usp42B2RQC2 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Usp42B2RQC2 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Usp42B2RQC2 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp42B2RQC2 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp42B2RQC2 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp42B2RQC2 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp42B2RQC2 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Usp42B2RQC2 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp42B2RQC2 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Usp42B2RQC2 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC18.6■□□□□ 0.57
Usp42B2RQC2 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC18.6■□□□□ 0.57
Usp42B2RQC2 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Usp42B2RQC2 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Usp42B2RQC2 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC18.6■□□□□ 0.57
Usp42B2RQC2 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp42B2RQC2 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Usp42B2RQC2 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp42B2RQC2 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Usp42B2RQC2 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp42B2RQC2 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp42B2RQC2 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Usp42B2RQC2 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Usp42B2RQC2 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Usp42B2RQC2 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp42B2RQC2 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp42B2RQC2 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Usp42B2RQC2 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
Usp42B2RQC2 Gm24589-201ENSMUST00000116692 94 ntBASIC18.59■□□□□ 0.57
Usp42B2RQC2 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC18.59■□□□□ 0.57
Usp42B2RQC2 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Usp42B2RQC2 Gm27459-201ENSMUST00000184860 107 ntBASIC18.59■□□□□ 0.57
Usp42B2RQC2 Gm13830-205ENSMUST00000201195 1155 ntBASIC18.59■□□□□ 0.57
Usp42B2RQC2 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp42B2RQC2 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp42B2RQC2 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Usp42B2RQC2 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp42B2RQC2 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp42B2RQC2 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp42B2RQC2 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp42B2RQC2 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Usp42B2RQC2 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp42B2RQC2 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp42B2RQC2 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Usp42B2RQC2 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Usp42B2RQC2 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Usp42B2RQC2 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Usp42B2RQC2 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Usp42B2RQC2 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Usp42B2RQC2 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Usp42B2RQC2 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
Usp42B2RQC2 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Usp42B2RQC2 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Usp42B2RQC2 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC18.58■□□□□ 0.57
Usp42B2RQC2 AC117588.1-201ENSMUST00000228510 999 ntBASIC18.58■□□□□ 0.57
Usp42B2RQC2 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Usp42B2RQC2 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Usp42B2RQC2 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Usp42B2RQC2 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Usp42B2RQC2 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
Usp42B2RQC2 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Usp42B2RQC2 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Usp42B2RQC2 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Usp42B2RQC2 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Usp42B2RQC2 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Usp42B2RQC2 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Usp42B2RQC2 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Usp42B2RQC2 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Usp42B2RQC2 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Usp42B2RQC2 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Usp42B2RQC2 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Usp42B2RQC2 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC18.57■□□□□ 0.56
Usp42B2RQC2 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Usp42B2RQC2 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms